RNA–Protein interactions for RNA: ENST00000573554.1

RPS15A-209, Transcript of ribosomal protein S15a, human

TSL 1 (best)

Gene RPS15A, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS15A-209	ENST00000573554	ZNF710	Q8N1W2	664 aa		18.82	■□□□□ 0.6
RPS15A-209	ENST00000573554	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	18.82	■□□□□ 0.6
RPS15A-209	ENST00000573554	P2RX5	Q93086	422 aa		18.82	■□□□□ 0.6
RPS15A-209	ENST00000573554	LMAN2L	Q9H0V9	348 aa		18.82	■□□□□ 0.6
RPS15A-209	ENST00000573554	NSUN3	Q9H649	340 aa	Known RBP	18.82	■□□□□ 0.6
RPS15A-209	ENST00000573554	NCOR1	O75376	2440 aa		18.81	■□□□□ 0.6
RPS15A-209	ENST00000573554	BTBD18	B2RXH4	712 aa		18.81	■□□□□ 0.6
RPS15A-209	ENST00000573554	CSDE1	O75534	798 aa	Known RBP	18.81	■□□□□ 0.6
RPS15A-209	ENST00000573554	MMP1	P03956	469 aa		18.81	■□□□□ 0.6
RPS15A-209	ENST00000573554	ITGB1	P05556	798 aa		18.81	■□□□□ 0.6
RPS15A-209	ENST00000573554	FGFR1	P11362	822 aa		18.81	■□□□□ 0.6
RPS15A-209	ENST00000573554	FGFR4	P22455	802 aa		18.81	■□□□□ 0.6
RPS15A-209	ENST00000573554	QARS	P47897	775 aa	Known RBP	18.81	■□□□□ 0.6
RPS15A-209	ENST00000573554	FOSB	P53539	338 aa		18.81	■□□□□ 0.6
RPS15A-209	ENST00000573554	SPIRE1	Q08AE8	756 aa		18.81	■□□□□ 0.6
RPS15A-209	ENST00000573554	LEXM	Q3ZCV2	418 aa		18.81	■□□□□ 0.6
RPS15A-209	ENST00000573554	PLA2G4F	Q68DD2	849 aa		18.81	■□□□□ 0.6
RPS15A-209	ENST00000573554	ZNF579	Q8NAF0	562 aa	Known RBP	18.81	■□□□□ 0.6
RPS15A-209	ENST00000573554	KLHL23	Q8NBE8	558 aa		18.81	■□□□□ 0.6
RPS15A-209	ENST00000573554	SPPL3	Q8TCT6	385 aa		18.81	■□□□□ 0.6
RPS15A-209	ENST00000573554	NAP1L4	Q99733	375 aa	Known RBP	18.81	■□□□□ 0.6
RPS15A-209	ENST00000573554	TMEM161A	Q9NX61	479 aa		18.81	■□□□□ 0.6
RPS15A-209	ENST00000573554	HCST	Q9UBK5	93 aa		18.81	■□□□□ 0.6
RPS15A-209	ENST00000573554	TBKBP1	A7MCY6	615 aa		18.8	■□□□□ 0.6
RPS15A-209	ENST00000573554	WNT7A	O00755	349 aa		18.8	■□□□□ 0.6
RPS15A-209	ENST00000573554	MAF	O75444	373 aa	Predicted RBP	18.8	■□□□□ 0.6
RPS15A-209	ENST00000573554	P4HB	P07237	508 aa	Known RBP	18.8	■□□□□ 0.6
RPS15A-209	ENST00000573554	NPEPPS	P55786	919 aa		18.8	■□□□□ 0.6
RPS15A-209	ENST00000573554	NAALADL2	Q58DX5	795 aa		18.8	■□□□□ 0.6
RPS15A-209	ENST00000573554	NEK9	Q8TD19	979 aa		18.8	■□□□□ 0.6
RPS15A-209	ENST00000573554	NLRP7	Q8WX94	980 aa		18.8	■□□□□ 0.6
RPS15A-209	ENST00000573554	KIF2C	Q99661	725 aa		18.8	■□□□□ 0.6
RPS15A-209	ENST00000573554	ELAC1	Q9H777	363 aa	Known RBP	18.8	■□□□□ 0.6
RPS15A-209	ENST00000573554	RNF19A	Q9NV58	838 aa		18.8	■□□□□ 0.6
RPS15A-209	ENST00000573554	RGL1	Q9NZL6	768 aa		18.8	■□□□□ 0.6
RPS15A-209	ENST00000573554		A0A087WZ62	844 aa		18.79	■□□□□ 0.6
RPS15A-209	ENST00000573554	CSPG5	O95196	566 aa		18.79	■□□□□ 0.6
RPS15A-209	ENST00000573554	EPHA7	Q15375	998 aa		18.79	■□□□□ 0.6
RPS15A-209	ENST00000573554	C8orf34	Q49A92	452 aa		18.79	■□□□□ 0.6
RPS15A-209	ENST00000573554	KSR1	Q8IVT5	923 aa		18.79	■□□□□ 0.6
RPS15A-209	ENST00000573554	DIS3L2	Q8IYB7	885 aa	Known RBP	18.79	■□□□□ 0.6
RPS15A-209	ENST00000573554	PABPC5	Q96DU9	382 aa	Known RBP	18.79	■□□□□ 0.6
RPS15A-209	ENST00000573554	FDXACB1	Q9BRP7	624 aa	Predicted RBP	18.79	■□□□□ 0.6
RPS15A-209	ENST00000573554	ATP6V0A4	Q9HBG4	840 aa		18.79	■□□□□ 0.6
RPS15A-209	ENST00000573554	BRMS1	Q9HCU9	246 aa		18.79	■□□□□ 0.6
RPS15A-209	ENST00000573554	CYP26B1	Q9NR63	512 aa		18.79	■□□□□ 0.6
RPS15A-209	ENST00000573554	TYW1	Q9NV66	732 aa	Known RBP	18.79	■□□□□ 0.6
RPS15A-209	ENST00000573554	RNF216	Q9NWF9	866 aa	Predicted RBP	18.79	■□□□□ 0.6
RPS15A-209	ENST00000573554	SUCLA2	Q9P2R7	463 aa	Predicted RBP	18.79	■□□□□ 0.6
RPS15A-209	ENST00000573554	LIMCH1	Q9UPQ0	1083 aa		18.79	■□□□□ 0.6
RPS15A-209	ENST00000573554	PLXNA4	Q9HCM2	1894 aa		18.79	■□□□□ 0.6
RPS15A-209	ENST00000573554		H3BQ06	376 aa	Predicted RBP	18.78	■□□□□ 0.6
RPS15A-209	ENST00000573554	ZBTB39	O15060	712 aa		18.78	■□□□□ 0.6
RPS15A-209	ENST00000573554	MARCH6	O60337	910 aa		18.78	■□□□□ 0.6
RPS15A-209	ENST00000573554	ZSCAN20	P17040	1043 aa	Predicted RBP	18.78	■□□□□ 0.6
RPS15A-209	ENST00000573554	GTF2F1	P35269	517 aa	Known RBP eCLIP	18.78	■□□□□ 0.6
RPS15A-209	ENST00000573554	IRS1	P35568	1242 aa		18.78	■□□□□ 0.6
RPS15A-209	ENST00000573554	LTBR	P36941	435 aa		18.78	■□□□□ 0.6
RPS15A-209	ENST00000573554	DNM2	P50570	870 aa		18.78	■□□□□ 0.6
RPS15A-209	ENST00000573554	HYAL1	Q12794	435 aa		18.78	■□□□□ 0.6
RPS15A-209	ENST00000573554	NCAPH2	Q6IBW4	605 aa		18.78	■□□□□ 0.6
RPS15A-209	ENST00000573554	ECHDC2	Q86YB7	292 aa		18.78	■□□□□ 0.6
RPS15A-209	ENST00000573554	C4orf19	Q8IY42	314 aa		18.78	■□□□□ 0.6
RPS15A-209	ENST00000573554	POF1B	Q8WVV4	589 aa		18.78	■□□□□ 0.6
RPS15A-209	ENST00000573554	DYDC2	Q96IM9	177 aa		18.78	■□□□□ 0.6
RPS15A-209	ENST00000573554	SCLT1	Q96NL6	688 aa		18.78	■□□□□ 0.6
RPS15A-209	ENST00000573554	CWH43	Q9H720	699 aa		18.78	■□□□□ 0.6
RPS15A-209	ENST00000573554	BAG4	O95429	457 aa	Known RBP	18.77	■□□□□ 0.6
RPS15A-209	ENST00000573554	CDC42EP1	Q00587	391 aa		18.77	■□□□□ 0.6
RPS15A-209	ENST00000573554	CTTN	Q14247	550 aa	Known RBP	18.77	■□□□□ 0.6
RPS15A-209	ENST00000573554	CTC1	Q2NKJ3	1217 aa		18.77	■□□□□ 0.6
RPS15A-209	ENST00000573554	LRRC55	Q6ZSA7	311 aa		18.77	■□□□□ 0.6
RPS15A-209	ENST00000573554	RHPN2	Q8IUC4	686 aa		18.77	■□□□□ 0.6
RPS15A-209	ENST00000573554	CCDC83	Q8IWF9	413 aa		18.77	■□□□□ 0.6
RPS15A-209	ENST00000573554	SLFN12	Q8IYM2	578 aa		18.77	■□□□□ 0.6
RPS15A-209	ENST00000573554	CASD1	Q96PB1	797 aa		18.77	■□□□□ 0.6
RPS15A-209	ENST00000573554	LXN	Q9BS40	222 aa		18.77	■□□□□ 0.6
RPS15A-209	ENST00000573554	GCOM2	Q9BZD3	368 aa	Predicted RBP	18.77	■□□□□ 0.6
RPS15A-209	ENST00000573554	CD320	Q9NPF0	282 aa		18.77	■□□□□ 0.6
RPS15A-209	ENST00000573554	BDP1	A6H8Y1	2624 aa		18.77	■□□□□ 0.6
RPS15A-209	ENST00000573554		A0A0U1RQF3	1178 aa		18.76	■□□□□ 0.59
RPS15A-209	ENST00000573554	GRXCR2	A6NFK2	248 aa		18.76	■□□□□ 0.59
RPS15A-209	ENST00000573554	DKC1	O60832	514 aa	Known RBP eCLIP	18.76	■□□□□ 0.59
RPS15A-209	ENST00000573554	SLITRK3	O94933	977 aa		18.76	■□□□□ 0.59
RPS15A-209	ENST00000573554	IL9	P15248	144 aa		18.76	■□□□□ 0.59
RPS15A-209	ENST00000573554	GUCY1B3	Q02153	619 aa		18.76	■□□□□ 0.59
RPS15A-209	ENST00000573554	DLX2	Q07687	328 aa	Predicted RBP	18.76	■□□□□ 0.59
RPS15A-209	ENST00000573554	TRIM29	Q14134	588 aa		18.76	■□□□□ 0.59
RPS15A-209	ENST00000573554	SPOUT1	Q5T280	376 aa	Known RBP	18.76	■□□□□ 0.59
RPS15A-209	ENST00000573554	PTCRA	Q6ISU1	281 aa	Predicted RBP	18.76	■□□□□ 0.59
RPS15A-209	ENST00000573554	EP400NL	Q6ZTU2	488 aa		18.76	■□□□□ 0.59
RPS15A-209	ENST00000573554	ADGRD2	Q7Z7M1	963 aa		18.76	■□□□□ 0.59
RPS15A-209	ENST00000573554	ZNF598	Q86UK7	904 aa	Known RBP	18.76	■□□□□ 0.59
RPS15A-209	ENST00000573554	ZNF410	Q86VK4	478 aa		18.76	■□□□□ 0.59
RPS15A-209	ENST00000573554	CEP170P1	Q96L14	293 aa		18.76	■□□□□ 0.59
RPS15A-209	ENST00000573554	TMEM117	Q9H0C3	514 aa		18.76	■□□□□ 0.59
RPS15A-209	ENST00000573554	DHX33	Q9H6R0	707 aa	Known RBP	18.76	■□□□□ 0.59
RPS15A-209	ENST00000573554	CLDND1	Q9NY35	253 aa		18.76	■□□□□ 0.59
RPS15A-209	ENST00000573554	PCDHA12	Q9UN75	941 aa		18.76	■□□□□ 0.59
RPS15A-209	ENST00000573554	LINC01565	O15544	149 aa		18.75	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms