RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 KLHL23Q8NBE8 558 aa10.83□□□□□ -0.68
NPLOC4-212ENST00000573328 NSUN7Q8NE18 718 aaKnown RBP10.83□□□□□ -0.68
NPLOC4-212ENST00000573328 P2RX5Q93086 422 aa10.83□□□□□ -0.68
NPLOC4-212ENST00000573328 PABPC5Q96DU9 382 aaKnown RBP10.83□□□□□ -0.68
NPLOC4-212ENST00000573328 FAM20AQ96MK3 541 aa10.83□□□□□ -0.68
NPLOC4-212ENST00000573328 GCOM2Q9BZD3 368 aaPredicted RBP10.83□□□□□ -0.68
NPLOC4-212ENST00000573328 IGFLR1Q9H665 355 aa10.83□□□□□ -0.68
NPLOC4-212ENST00000573328 AAASQ9NRG9 546 aa10.83□□□□□ -0.68
NPLOC4-212ENST00000573328 TMEM161AQ9NX61 479 aa10.83□□□□□ -0.68
NPLOC4-212ENST00000573328 PCDHB12Q9Y5F1 795 aa10.83□□□□□ -0.68
NPLOC4-212ENST00000573328 TDRD15B5MCY1 1934 aaKnown RBP10.82□□□□□ -0.68
NPLOC4-212ENST00000573328 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.82□□□□□ -0.68
NPLOC4-212ENST00000573328 FAM205CA6NFA0 338 aa10.82□□□□□ -0.68
NPLOC4-212ENST00000573328 EML1O00423 815 aa10.82□□□□□ -0.68
NPLOC4-212ENST00000573328 HOXA2O43364 376 aa10.82□□□□□ -0.68
NPLOC4-212ENST00000573328 JAK2O60674 1132 aa10.82□□□□□ -0.68
NPLOC4-212ENST00000573328 ITGB1P05556 798 aa10.82□□□□□ -0.68
NPLOC4-212ENST00000573328 FGFR1P11362 822 aa10.82□□□□□ -0.68
NPLOC4-212ENST00000573328 DARSP14868 501 aaKnown RBP10.82□□□□□ -0.68
NPLOC4-212ENST00000573328 FGFR4P22455 802 aa10.82□□□□□ -0.68
NPLOC4-212ENST00000573328 SFPQP23246 707 aaKnown RBP eCLIP10.82□□□□□ -0.68
NPLOC4-212ENST00000573328 SSTR3P32745 418 aaPredicted RBP10.82□□□□□ -0.68
NPLOC4-212ENST00000573328 QARSP47897 775 aaKnown RBP10.82□□□□□ -0.68
NPLOC4-212ENST00000573328 POLGP54098 1239 aaPredicted RBP10.82□□□□□ -0.68
NPLOC4-212ENST00000573328 PPP2R5CQ13362 524 aa10.82□□□□□ -0.68
NPLOC4-212ENST00000573328 DRP2Q13474 957 aa10.82□□□□□ -0.68
NPLOC4-212ENST00000573328 NAALADL2Q58DX5 795 aa10.82□□□□□ -0.68
NPLOC4-212ENST00000573328 EARS2Q5JPH6 523 aaKnown RBP10.82□□□□□ -0.68
NPLOC4-212ENST00000573328 B3GNT9Q6UX72 402 aa10.82□□□□□ -0.68
NPLOC4-212ENST00000573328 RHPN2Q8IUC4 686 aa10.82□□□□□ -0.68
NPLOC4-212ENST00000573328 SLFN12Q8IYM2 578 aa10.82□□□□□ -0.68
NPLOC4-212ENST00000573328 THNSL1Q8IYQ7 743 aa10.82□□□□□ -0.68
NPLOC4-212ENST00000573328 CRIPAKQ8N1N5 446 aa10.82□□□□□ -0.68
NPLOC4-212ENST00000573328 POF1BQ8WVV4 589 aa10.82□□□□□ -0.68
NPLOC4-212ENST00000573328 SLC7A3Q8WY07 619 aa10.82□□□□□ -0.68
NPLOC4-212ENST00000573328 NLRP4Q96MN2 994 aa10.82□□□□□ -0.68
NPLOC4-212ENST00000573328 CCDC43Q96MW1 224 aaKnown RBP10.82□□□□□ -0.68
NPLOC4-212ENST00000573328 JPH2Q9BR39 696 aaPredicted RBP10.82□□□□□ -0.68
NPLOC4-212ENST00000573328 LXNQ9BS40 222 aa10.82□□□□□ -0.68
NPLOC4-212ENST00000573328 NIFKQ9BYG3 293 aaKnown RBP10.82□□□□□ -0.68
NPLOC4-212ENST00000573328 ADAMTS10Q9H324 1103 aa10.82□□□□□ -0.68
NPLOC4-212ENST00000573328 KCNMB3Q9NPA1 279 aa10.82□□□□□ -0.68
NPLOC4-212ENST00000573328 BMP2KQ9NSY1 1161 aaPredicted RBP10.82□□□□□ -0.68
NPLOC4-212ENST00000573328 VAV3Q9UKW4 847 aa10.82□□□□□ -0.68
NPLOC4-212ENST00000573328 PLAGL2Q9UPG8 496 aa10.82□□□□□ -0.68
NPLOC4-212ENST00000573328 FAM50BQ9Y247 325 aa10.82□□□□□ -0.68
NPLOC4-212ENST00000573328 C5orf42Q9H799 3197 aa10.82□□□□□ -0.68
NPLOC4-212ENST00000573328 A0A087WZ62 844 aa10.81□□□□□ -0.68
NPLOC4-212ENST00000573328 TBX3O15119 743 aa10.81□□□□□ -0.68
NPLOC4-212ENST00000573328 NCK2O43639 380 aa10.81□□□□□ -0.68
NPLOC4-212ENST00000573328 CSDE1O75534 798 aaKnown RBP10.81□□□□□ -0.68
NPLOC4-212ENST00000573328 SEC24BO95487 1268 aa10.81□□□□□ -0.68
NPLOC4-212ENST00000573328 P4HBP07237 508 aaKnown RBP10.81□□□□□ -0.68
NPLOC4-212ENST00000573328 FDPSP14324 419 aaKnown RBP10.81□□□□□ -0.68
NPLOC4-212ENST00000573328 IL9P15248 144 aa10.81□□□□□ -0.68
NPLOC4-212ENST00000573328 NDUFV1P49821 464 aa10.81□□□□□ -0.68
NPLOC4-212ENST00000573328 CDC42EP1Q00587 391 aa10.81□□□□□ -0.68
NPLOC4-212ENST00000573328 CYP4A11Q02928 519 aa10.81□□□□□ -0.68
NPLOC4-212ENST00000573328 HYAL1Q12794 435 aa10.81□□□□□ -0.68
NPLOC4-212ENST00000573328 DSC3Q14574 896 aa10.81□□□□□ -0.68
NPLOC4-212ENST00000573328 TARBP2Q15633 366 aaKnown RBP10.81□□□□□ -0.68
NPLOC4-212ENST00000573328 CLUL1Q15846 466 aa10.81□□□□□ -0.68
NPLOC4-212ENST00000573328 CALCRLQ16602 461 aa10.81□□□□□ -0.68
NPLOC4-212ENST00000573328 PUS10Q3MIT2 529 aaKnown RBP10.81□□□□□ -0.68
NPLOC4-212ENST00000573328 DIS3L2Q8IYB7 885 aaKnown RBP10.81□□□□□ -0.68
NPLOC4-212ENST00000573328 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.81□□□□□ -0.68
NPLOC4-212ENST00000573328 SPPL3Q8TCT6 385 aa10.81□□□□□ -0.68
NPLOC4-212ENST00000573328 MICAL1Q8TDZ2 1067 aa10.81□□□□□ -0.68
NPLOC4-212ENST00000573328 CEP170P1Q96L14 293 aa10.81□□□□□ -0.68
NPLOC4-212ENST00000573328 FDXACB1Q9BRP7 624 aaPredicted RBP10.81□□□□□ -0.68
NPLOC4-212ENST00000573328 INO80BQ9C086 356 aaPredicted RBP10.81□□□□□ -0.68
NPLOC4-212ENST00000573328 TMEM117Q9H0C3 514 aa10.81□□□□□ -0.68
NPLOC4-212ENST00000573328 ELAC1Q9H777 363 aaKnown RBP10.81□□□□□ -0.68
NPLOC4-212ENST00000573328 CYP26B1Q9NR63 512 aa10.81□□□□□ -0.68
NPLOC4-212ENST00000573328 DACT1Q9NYF0 836 aa10.81□□□□□ -0.68
NPLOC4-212ENST00000573328 SUCLA2Q9P2R7 463 aaPredicted RBP10.81□□□□□ -0.68
NPLOC4-212ENST00000573328 HCSTQ9UBK5 93 aa10.81□□□□□ -0.68
NPLOC4-212ENST00000573328 PIN4Q9Y237 131 aaKnown RBP10.81□□□□□ -0.68
NPLOC4-212ENST00000573328 BTBD18B2RXH4 712 aa10.8□□□□□ -0.68
NPLOC4-212ENST00000573328 NEMFO60524 1076 aa10.8□□□□□ -0.68
NPLOC4-212ENST00000573328 MAFO75444 373 aaPredicted RBP10.8□□□□□ -0.68
NPLOC4-212ENST00000573328 LAG3P18627 525 aa10.8□□□□□ -0.68
NPLOC4-212ENST00000573328 ATP2B1P20020 1258 aa10.8□□□□□ -0.68
NPLOC4-212ENST00000573328 GTF2F1P35269 517 aaKnown RBP eCLIP10.8□□□□□ -0.68
NPLOC4-212ENST00000573328 NPEPPSP55786 919 aa10.8□□□□□ -0.68
NPLOC4-212ENST00000573328 GNL2Q13823 731 aaKnown RBP10.8□□□□□ -0.68
NPLOC4-212ENST00000573328 CTTNQ14247 550 aaKnown RBP10.8□□□□□ -0.68
NPLOC4-212ENST00000573328 EPHA7Q15375 998 aa10.8□□□□□ -0.68
NPLOC4-212ENST00000573328 SAFBQ15424 915 aaKnown RBP eCLIP10.8□□□□□ -0.68
NPLOC4-212ENST00000573328 CSPP1Q1MSJ5 1256 aa10.8□□□□□ -0.68
NPLOC4-212ENST00000573328 TWF2Q6IBS0 349 aaKnown RBP10.8□□□□□ -0.68
NPLOC4-212ENST00000573328 ANO5Q75V66 913 aa10.8□□□□□ -0.68
NPLOC4-212ENST00000573328 OTUD6AQ7L8S5 288 aa10.8□□□□□ -0.68
NPLOC4-212ENST00000573328 CATSPER4Q7RTX7 472 aa10.8□□□□□ -0.68
NPLOC4-212ENST00000573328 ZNF410Q86VK4 478 aa10.8□□□□□ -0.68
NPLOC4-212ENST00000573328 ECHDC2Q86YB7 292 aa10.8□□□□□ -0.68
NPLOC4-212ENST00000573328 CCDC83Q8IWF9 413 aa10.8□□□□□ -0.68
NPLOC4-212ENST00000573328 EXOC8Q8IYI6 725 aa10.8□□□□□ -0.68
NPLOC4-212ENST00000573328 LRRC43Q8N309 656 aa10.8□□□□□ -0.68
NPLOC4-212ENST00000573328 COLGALT1Q8NBJ5 622 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms