RNA–Protein interactions for RNA: ENST00000573018.1

ERCC4-204, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, human

TSL 2

Gene ERCC4, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC4-204	ENST00000573018	FAM47C	Q5HY64	1035 aa		4.93	□□□□□ -1.62
ERCC4-204	ENST00000573018	LY6G5C	Q5SRR4	150 aa		4.93	□□□□□ -1.62
ERCC4-204	ENST00000573018	KCNV1	Q6PIU1	500 aa		4.93	□□□□□ -1.62
ERCC4-204	ENST00000573018	NOSTRIN	Q8IVI9	506 aa		4.93	□□□□□ -1.62
ERCC4-204	ENST00000573018	ZC3H7A	Q8IWR0	971 aa	Known RBP	4.93	□□□□□ -1.62
ERCC4-204	ENST00000573018	CALML6	Q8TD86	181 aa		4.93	□□□□□ -1.62
ERCC4-204	ENST00000573018	MNT	Q99583	582 aa		4.93	□□□□□ -1.62
ERCC4-204	ENST00000573018	TCF25	Q9BQ70	676 aa		4.93	□□□□□ -1.62
ERCC4-204	ENST00000573018	IGSF5	Q9NSI5	407 aa		4.93	□□□□□ -1.62
ERCC4-204	ENST00000573018	VWA7	Q9Y334	891 aa		4.93	□□□□□ -1.62
ERCC4-204	ENST00000573018	GSTA4	O15217	222 aa		4.92	□□□□□ -1.62
ERCC4-204	ENST00000573018	TCIRG1	Q13488	830 aa		4.92	□□□□□ -1.62
ERCC4-204	ENST00000573018	TMEM132B	Q14DG7	1078 aa		4.92	□□□□□ -1.62
ERCC4-204	ENST00000573018	FKBP15	Q5T1M5	1219 aa		4.92	□□□□□ -1.62
ERCC4-204	ENST00000573018	SYCE2	Q6PIF2	218 aa		4.92	□□□□□ -1.62
ERCC4-204	ENST00000573018	ADGRG3	Q86Y34	549 aa		4.92	□□□□□ -1.62
ERCC4-204	ENST00000573018	MCF2L2	Q86YR7	1114 aa		4.92	□□□□□ -1.62
ERCC4-204	ENST00000573018	ST13P5	Q8NFI4	369 aa	Predicted RBP	4.92	□□□□□ -1.62
ERCC4-204	ENST00000573018	LPP	Q93052	612 aa		4.92	□□□□□ -1.62
ERCC4-204	ENST00000573018	IL23A	Q9NPF7	189 aa		4.92	□□□□□ -1.62
ERCC4-204	ENST00000573018	KCNH7	Q9NS40	1196 aa		4.92	□□□□□ -1.62
ERCC4-204	ENST00000573018	SAE1	Q9UBE0	346 aa	Predicted RBP	4.92	□□□□□ -1.62
ERCC4-204	ENST00000573018	ASB1	Q9Y576	335 aa		4.92	□□□□□ -1.62
ERCC4-204	ENST00000573018	ITGB1	P05556	798 aa		4.91	□□□□□ -1.62
ERCC4-204	ENST00000573018	ERCC5	P28715	1186 aa	Predicted RBP	4.91	□□□□□ -1.62
ERCC4-204	ENST00000573018	KRTAP10-11	P60412	298 aa		4.91	□□□□□ -1.62
ERCC4-204	ENST00000573018	LACTB	P83111	547 aa	Predicted RBP	4.91	□□□□□ -1.62
ERCC4-204	ENST00000573018	HECTD2	Q5U5R9	776 aa		4.91	□□□□□ -1.62
ERCC4-204	ENST00000573018	C1QL3	Q5VWW1	255 aa		4.91	□□□□□ -1.62
ERCC4-204	ENST00000573018	OLFML1	Q6UWY5	402 aa		4.91	□□□□□ -1.62
ERCC4-204	ENST00000573018	CDC6	Q99741	560 aa		4.91	□□□□□ -1.62
ERCC4-204	ENST00000573018	SPATA9	Q9BWV2	254 aa		4.91	□□□□□ -1.62
ERCC4-204	ENST00000573018	RCAN3	Q9UKA8	241 aa		4.91	□□□□□ -1.62
ERCC4-204	ENST00000573018	DENND2A	Q9ULE3	1009 aa		4.91	□□□□□ -1.62
ERCC4-204	ENST00000573018	FZD1	Q9UP38	647 aa		4.91	□□□□□ -1.62
ERCC4-204	ENST00000573018	TRBV23-1	A0A0A0MS06	115 aa		4.9	□□□□□ -1.63
ERCC4-204	ENST00000573018	GOLGA6L6	A8MZA4	724 aa		4.9	□□□□□ -1.63
ERCC4-204	ENST00000573018	GOLGA6L22	H0YM25	854 aa		4.9	□□□□□ -1.63
ERCC4-204	ENST00000573018	KIAA0355	O15063	1070 aa		4.9	□□□□□ -1.63
ERCC4-204	ENST00000573018	CRTAM	O95727	393 aa		4.9	□□□□□ -1.63
ERCC4-204	ENST00000573018	C6orf222	P0C671	652 aa	Predicted RBP	4.9	□□□□□ -1.63
ERCC4-204	ENST00000573018	SESN2	P58004	480 aa	Predicted RBP	4.9	□□□□□ -1.63
ERCC4-204	ENST00000573018	ANTXR2	P58335	489 aa		4.9	□□□□□ -1.63
ERCC4-204	ENST00000573018	GNL2	Q13823	731 aa	Known RBP	4.9	□□□□□ -1.63
ERCC4-204	ENST00000573018	FAM209A	Q5JX71	171 aa		4.9	□□□□□ -1.63
ERCC4-204	ENST00000573018	STRIP1	Q5VSL9	837 aa		4.9	□□□□□ -1.63
ERCC4-204	ENST00000573018	LRRC55	Q6ZSA7	311 aa		4.9	□□□□□ -1.63
ERCC4-204	ENST00000573018	BEND2	Q8NDZ0	799 aa		4.9	□□□□□ -1.63
ERCC4-204	ENST00000573018	CPT1C	Q8TCG5	803 aa		4.9	□□□□□ -1.63
ERCC4-204	ENST00000573018	GFM2	Q969S9	779 aa	Known RBP	4.9	□□□□□ -1.63
ERCC4-204	ENST00000573018	NCDN	Q9UBB6	729 aa		4.9	□□□□□ -1.63
ERCC4-204	ENST00000573018	SORCS3	Q9UPU3	1222 aa		4.9	□□□□□ -1.63
ERCC4-204	ENST00000573018	COQ6	Q9Y2Z9	468 aa		4.9	□□□□□ -1.63
ERCC4-204	ENST00000573018	GRXCR1	A8MXD5	290 aa		4.89	□□□□□ -1.63
ERCC4-204	ENST00000573018	KLF4	O43474	513 aa		4.89	□□□□□ -1.63
ERCC4-204	ENST00000573018	B3GALT2	O43825	422 aa		4.89	□□□□□ -1.63
ERCC4-204	ENST00000573018	RASGRP1	O95267	797 aa		4.89	□□□□□ -1.63
ERCC4-204	ENST00000573018	SUMO1	P63165	101 aa	Known RBP	4.89	□□□□□ -1.63
ERCC4-204	ENST00000573018	ALDH6A1	Q02252	535 aa	Known RBP	4.89	□□□□□ -1.63
ERCC4-204	ENST00000573018	ARID5A	Q03989	594 aa		4.89	□□□□□ -1.63
ERCC4-204	ENST00000573018	COLEC12	Q5KU26	742 aa		4.89	□□□□□ -1.63
ERCC4-204	ENST00000573018	CATSPERE	Q5SY80	951 aa		4.89	□□□□□ -1.63
ERCC4-204	ENST00000573018	FOXB2	Q5VYV0	432 aa		4.89	□□□□□ -1.63
ERCC4-204	ENST00000573018	KRT40	Q6A162	431 aa		4.89	□□□□□ -1.63
ERCC4-204	ENST00000573018	SPATC1	Q76KD6	591 aa		4.89	□□□□□ -1.63
ERCC4-204	ENST00000573018	THAP3	Q8WTV1	239 aa	Predicted RBP	4.89	□□□□□ -1.63
ERCC4-204	ENST00000573018	ARL8A	Q96BM9	186 aa		4.89	□□□□□ -1.63
ERCC4-204	ENST00000573018	ZNF512	Q96ME7	567 aa	Predicted RBP	4.89	□□□□□ -1.63
ERCC4-204	ENST00000573018	SYNPO2L	Q9H987	977 aa		4.89	□□□□□ -1.63
ERCC4-204	ENST00000573018	NISCH	Q9Y2I1	1504 aa		4.88	□□□□□ -1.63
ERCC4-204	ENST00000573018	MFAP3L	O75121	409 aa		4.88	□□□□□ -1.63
ERCC4-204	ENST00000573018	MAF	O75444	373 aa	Predicted RBP	4.88	□□□□□ -1.63
ERCC4-204	ENST00000573018	TOX4	O94842	621 aa		4.88	□□□□□ -1.63
ERCC4-204	ENST00000573018	ERBB2	P04626	1255 aa		4.88	□□□□□ -1.63
ERCC4-204	ENST00000573018	NAT1	P18440	290 aa		4.88	□□□□□ -1.63
ERCC4-204	ENST00000573018	CD38	P28907	300 aa		4.88	□□□□□ -1.63
ERCC4-204	ENST00000573018	TIGD2	Q4W5G0	525 aa		4.88	□□□□□ -1.63
ERCC4-204	ENST00000573018	NBPF6	Q5VWK0	638 aa		4.88	□□□□□ -1.63
ERCC4-204	ENST00000573018	HTR3D	Q70Z44	454 aa		4.88	□□□□□ -1.63
ERCC4-204	ENST00000573018	NBPF4	Q96M43	638 aa		4.88	□□□□□ -1.63
ERCC4-204	ENST00000573018	B3GALT1	Q9Y5Z6	326 aa		4.88	□□□□□ -1.63
ERCC4-204	ENST00000573018	HS3ST4	Q9Y661	456 aa		4.88	□□□□□ -1.63
ERCC4-204	ENST00000573018	COL4A3	Q01955	1670 aa		4.88	□□□□□ -1.63
ERCC4-204	ENST00000573018	ADCY3	O60266	1144 aa		4.87	□□□□□ -1.63
ERCC4-204	ENST00000573018	IPO13	O94829	963 aa	Known RBP	4.87	□□□□□ -1.63
ERCC4-204	ENST00000573018	HK1	P19367	917 aa		4.87	□□□□□ -1.63
ERCC4-204	ENST00000573018	SDHA	P31040	664 aa		4.87	□□□□□ -1.63
ERCC4-204	ENST00000573018	CLK3	P49761	638 aa	Known RBP	4.87	□□□□□ -1.63
ERCC4-204	ENST00000573018	RGS3	P49796	1198 aa		4.87	□□□□□ -1.63
ERCC4-204	ENST00000573018	MFSD5	Q6N075	450 aa		4.87	□□□□□ -1.63
ERCC4-204	ENST00000573018	CXorf67	Q86X51	503 aa	Predicted RBP	4.87	□□□□□ -1.63
ERCC4-204	ENST00000573018	MDGA1	Q8NFP4	955 aa		4.87	□□□□□ -1.63
ERCC4-204	ENST00000573018	OR5AN1	Q8NGI8	311 aa		4.87	□□□□□ -1.63
ERCC4-204	ENST00000573018	DLG3	Q92796	817 aa		4.87	□□□□□ -1.63
ERCC4-204	ENST00000573018	FOXRED1	Q96CU9	486 aa	Predicted RBP	4.87	□□□□□ -1.63
ERCC4-204	ENST00000573018	TOR3A	Q9H497	397 aa		4.87	□□□□□ -1.63
ERCC4-204	ENST00000573018	CYP4F11	Q9HBI6	524 aa		4.87	□□□□□ -1.63
ERCC4-204	ENST00000573018	PFDN2	Q9UHV9	154 aa		4.87	□□□□□ -1.63
ERCC4-204	ENST00000573018	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.86	□□□□□ -1.63
ERCC4-204	ENST00000573018	LPXN	O60711	386 aa		4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms