RNA–Protein interactions for RNA: ENST00000572845.1

TVP23B-205, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 483 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-205ENST00000572845 DLG3Q92796 817 aa4.49□□□□□ -1.69
TVP23B-205ENST00000572845 PKNOX2Q96KN3 472 aa4.49□□□□□ -1.69
TVP23B-205ENST00000572845 TCF25Q9BQ70 676 aa4.49□□□□□ -1.69
TVP23B-205ENST00000572845 DHRS4Q9BTZ2 278 aa4.49□□□□□ -1.69
TVP23B-205ENST00000572845 CELF4Q9BZC1 486 aaKnown RBP4.49□□□□□ -1.69
TVP23B-205ENST00000572845 CCDC113Q9H0I3 377 aa4.49□□□□□ -1.69
TVP23B-205ENST00000572845 B3GALT1Q9Y5Z6 326 aa4.49□□□□□ -1.69
TVP23B-205ENST00000572845 SLC12A8A0AV02 714 aa4.48□□□□□ -1.69
TVP23B-205ENST00000572845 E9PSI1 815 aa4.48□□□□□ -1.69
TVP23B-205ENST00000572845 SEC23AQ15436 765 aa4.48□□□□□ -1.69
TVP23B-205ENST00000572845 ELAVL1Q15717 326 aaKnown RBP4.48□□□□□ -1.69
TVP23B-205ENST00000572845 CCDC142Q17RM4 750 aa4.48□□□□□ -1.69
TVP23B-205ENST00000572845 MTERF2Q49AM1 385 aa4.48□□□□□ -1.69
TVP23B-205ENST00000572845 RABL3Q5HYI8 236 aa4.48□□□□□ -1.69
TVP23B-205ENST00000572845 FAM209AQ5JX71 171 aa4.48□□□□□ -1.69
TVP23B-205ENST00000572845 Q6ZRM9 215 aa4.48□□□□□ -1.69
TVP23B-205ENST00000572845 GAREM2Q75VX8 874 aa4.48□□□□□ -1.69
TVP23B-205ENST00000572845 MRGPREQ86SM8 312 aa4.48□□□□□ -1.69
TVP23B-205ENST00000572845 CKAP2LQ8IYA6 745 aa4.48□□□□□ -1.69
TVP23B-205ENST00000572845 MAGEB10Q96LZ2 347 aaPredicted RBP4.48□□□□□ -1.69
TVP23B-205ENST00000572845 FOXB1Q99853 325 aa4.48□□□□□ -1.69
TVP23B-205ENST00000572845 BCCIPQ9P287 314 aaKnown RBP eCLIP4.48□□□□□ -1.69
TVP23B-205ENST00000572845 PACSIN3Q9UKS6 424 aa4.48□□□□□ -1.69
TVP23B-205ENST00000572845 DENND2AQ9ULE3 1009 aa4.48□□□□□ -1.69
TVP23B-205ENST00000572845 MSRB2Q9Y3D2 182 aa4.48□□□□□ -1.69
TVP23B-205ENST00000572845 KCNK3O14649 394 aa4.47□□□□□ -1.69
TVP23B-205ENST00000572845 RPS6KA4O75676 772 aa4.47□□□□□ -1.69
TVP23B-205ENST00000572845 IPO13O94829 963 aaKnown RBP4.47□□□□□ -1.69
TVP23B-205ENST00000572845 LMO1P25800 156 aa4.47□□□□□ -1.69
TVP23B-205ENST00000572845 BPIFB4P59827 614 aa4.47□□□□□ -1.69
TVP23B-205ENST00000572845 ALDH6A1Q02252 535 aaKnown RBP4.47□□□□□ -1.69
TVP23B-205ENST00000572845 COL10A1Q03692 680 aa4.47□□□□□ -1.69
TVP23B-205ENST00000572845 SSRP1Q08945 709 aaKnown RBP4.47□□□□□ -1.69
TVP23B-205ENST00000572845 FSTL1Q12841 308 aa4.47□□□□□ -1.69
TVP23B-205ENST00000572845 SAFB2Q14151 953 aaKnown RBP eCLIP4.47□□□□□ -1.69
TVP23B-205ENST00000572845 PTPAQ15257 358 aa4.47□□□□□ -1.69
TVP23B-205ENST00000572845 DGKDQ16760 1214 aa4.47□□□□□ -1.69
TVP23B-205ENST00000572845 LY6G5CQ5SRR4 150 aa4.47□□□□□ -1.69
TVP23B-205ENST00000572845 SPATC1Q76KD6 591 aa4.47□□□□□ -1.69
TVP23B-205ENST00000572845 BCL6BQ8N143 479 aaPredicted RBP4.47□□□□□ -1.69
TVP23B-205ENST00000572845 ZNF276Q8N554 614 aa4.47□□□□□ -1.69
TVP23B-205ENST00000572845 FZD1Q9UP38 647 aa4.47□□□□□ -1.69
TVP23B-205ENST00000572845 UBE2QL1A1L167 161 aa4.46□□□□□ -1.7
TVP23B-205ENST00000572845 MAFGO15525 162 aa4.46□□□□□ -1.7
TVP23B-205ENST00000572845 DAPK3O43293 454 aa4.46□□□□□ -1.7
TVP23B-205ENST00000572845 NUDT3O95989 172 aa4.46□□□□□ -1.7
TVP23B-205ENST00000572845 LMNAP02545 664 aaKnown RBP4.46□□□□□ -1.7
TVP23B-205ENST00000572845 ROM1Q03395 351 aa4.46□□□□□ -1.7
TVP23B-205ENST00000572845 TAP1Q03518 808 aa4.46□□□□□ -1.7
TVP23B-205ENST00000572845 TCIRG1Q13488 830 aa4.46□□□□□ -1.7
TVP23B-205ENST00000572845 TMEM132BQ14DG7 1078 aa4.46□□□□□ -1.7
TVP23B-205ENST00000572845 FKBP15Q5T1M5 1219 aa4.46□□□□□ -1.7
TVP23B-205ENST00000572845 CC2D1AQ6P1N0 951 aaPredicted RBP4.46□□□□□ -1.7
TVP23B-205ENST00000572845 HTR3DQ70Z44 454 aa4.46□□□□□ -1.7
TVP23B-205ENST00000572845 TICAM2Q86XR7 235 aa4.46□□□□□ -1.7
TVP23B-205ENST00000572845 CISD2Q8N5K1 135 aaKnown RBP4.46□□□□□ -1.7
TVP23B-205ENST00000572845 ANKRD53Q8N9V6 530 aa4.46□□□□□ -1.7
TVP23B-205ENST00000572845 THAP3Q8WTV1 239 aaPredicted RBP4.46□□□□□ -1.7
TVP23B-205ENST00000572845 RPL10LQ96L21 214 aaKnown RBP4.46□□□□□ -1.7
TVP23B-205ENST00000572845 GPHA2Q96T91 129 aa4.46□□□□□ -1.7
TVP23B-205ENST00000572845 MNTQ99583 582 aa4.46□□□□□ -1.7
TVP23B-205ENST00000572845 IL23AQ9NPF7 189 aa4.46□□□□□ -1.7
TVP23B-205ENST00000572845 RCAN3Q9UKA8 241 aa4.46□□□□□ -1.7
TVP23B-205ENST00000572845 RBM8AQ9Y5S9 174 aaKnown RBP4.46□□□□□ -1.7
TVP23B-205ENST00000572845 CCDC163A0A0D9SF12 145 aa4.45□□□□□ -1.7
TVP23B-205ENST00000572845 C2orf78A6NCI8 922 aa4.45□□□□□ -1.7
TVP23B-205ENST00000572845 RASSF10A6NK89 507 aa4.45□□□□□ -1.7
TVP23B-205ENST00000572845 STK10O94804 968 aaKnown RBP4.45□□□□□ -1.7
TVP23B-205ENST00000572845 JUNP05412 331 aaKnown RBP4.45□□□□□ -1.7
TVP23B-205ENST00000572845 ITGB1P05556 798 aa4.45□□□□□ -1.7
TVP23B-205ENST00000572845 VSIG10L2P0DP72 767 aa4.45□□□□□ -1.7
TVP23B-205ENST00000572845 FNTBP49356 437 aa4.45□□□□□ -1.7
TVP23B-205ENST00000572845 ATXN1P54253 815 aaKnown RBP4.45□□□□□ -1.7
TVP23B-205ENST00000572845 ARHGAP44Q17R89 818 aa4.45□□□□□ -1.7
TVP23B-205ENST00000572845 NBPF6Q5VWK0 638 aa4.45□□□□□ -1.7
TVP23B-205ENST00000572845 MBNL2Q5VZF2 373 aaKnown RBP4.45□□□□□ -1.7
TVP23B-205ENST00000572845 CERS3Q8IU89 383 aa4.45□□□□□ -1.7
TVP23B-205ENST00000572845 C2orf69Q8N8R5 385 aa4.45□□□□□ -1.7
TVP23B-205ENST00000572845 PLA2G15Q8NCC3 412 aa4.45□□□□□ -1.7
TVP23B-205ENST00000572845 NBPF4Q96M43 638 aa4.45□□□□□ -1.7
TVP23B-205ENST00000572845 RIOX1Q9H6W3 641 aa4.45□□□□□ -1.7
TVP23B-205ENST00000572845 KCMF1Q9P0J7 381 aa4.45□□□□□ -1.7
TVP23B-205ENST00000572845 TRPS1Q9UHF7 1281 aa4.45□□□□□ -1.7
TVP23B-205ENST00000572845 SYNPO2Q9UMS6 1093 aa4.45□□□□□ -1.7
TVP23B-205ENST00000572845 MRPS23Q9Y3D9 190 aaKnown RBP4.45□□□□□ -1.7
TVP23B-205ENST00000572845 RECQL4O94761 1208 aa4.44□□□□□ -1.7
TVP23B-205ENST00000572845 ABHD16AO95870 558 aa4.44□□□□□ -1.7
TVP23B-205ENST00000572845 PROZP22891 400 aa4.44□□□□□ -1.7
TVP23B-205ENST00000572845 RABGGTBP53611 331 aa4.44□□□□□ -1.7
TVP23B-205ENST00000572845 MRPS21P82921 87 aaKnown RBP4.44□□□□□ -1.7
TVP23B-205ENST00000572845 CATSPEREQ5SY80 951 aa4.44□□□□□ -1.7
TVP23B-205ENST00000572845 FOXB2Q5VYV0 432 aa4.44□□□□□ -1.7
TVP23B-205ENST00000572845 NAIF1Q69YI7 327 aaPredicted RBP4.44□□□□□ -1.7
TVP23B-205ENST00000572845 KRT40Q6A162 431 aa4.44□□□□□ -1.7
TVP23B-205ENST00000572845 RHOUQ7L0Q8 258 aa4.44□□□□□ -1.7
TVP23B-205ENST00000572845 OVCH1Q7RTY7 1134 aa4.44□□□□□ -1.7
TVP23B-205ENST00000572845 NME9Q86XW9 330 aa4.44□□□□□ -1.7
TVP23B-205ENST00000572845 MDGA1Q8NFP4 955 aa4.44□□□□□ -1.7
TVP23B-205ENST00000572845 ATXN2LQ8WWM7 1075 aaKnown RBP4.44□□□□□ -1.7
TVP23B-205ENST00000572845 ERCC4Q92889 916 aaPredicted RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms