RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 VPS54Q9P1Q0 977 aa8.45□□□□□ -1.06
NUP88-205ENST00000572809 YBX2Q9Y2T7 364 aaKnown RBP8.45□□□□□ -1.06
NUP88-205ENST00000572809 PCDHA11Q9Y5I1 949 aa8.45□□□□□ -1.06
NUP88-205ENST00000572809 NFASCO94856 1347 aa8.45□□□□□ -1.06
NUP88-205ENST00000572809 DOCK5Q9H7D0 1870 aa8.45□□□□□ -1.06
NUP88-205ENST00000572809 SCN5AQ14524 2016 aa8.44□□□□□ -1.06
NUP88-205ENST00000572809 ABHD14A-ACY1A0A1B0GW23 586 aa8.44□□□□□ -1.06
NUP88-205ENST00000572809 RRN3P2A6NIE6 340 aa8.44□□□□□ -1.06
NUP88-205ENST00000572809 FAM86B1E9PN63 330 aa8.44□□□□□ -1.06
NUP88-205ENST00000572809 CAND2O75155 1236 aa8.44□□□□□ -1.06
NUP88-205ENST00000572809 LGR5O75473 907 aa8.44□□□□□ -1.06
NUP88-205ENST00000572809 DEXIO95424 95 aa8.44□□□□□ -1.06
NUP88-205ENST00000572809 FAM86B2P0C5J1 330 aa8.44□□□□□ -1.06
NUP88-205ENST00000572809 BMP2P12643 396 aa8.44□□□□□ -1.06
NUP88-205ENST00000572809 MYOGP15173 224 aa8.44□□□□□ -1.06
NUP88-205ENST00000572809 FOSL2P15408 326 aa8.44□□□□□ -1.06
NUP88-205ENST00000572809 MARK3P27448 753 aa8.44□□□□□ -1.06
NUP88-205ENST00000572809 STAT5BP51692 787 aa8.44□□□□□ -1.06
NUP88-205ENST00000572809 ACTR2P61160 394 aa8.44□□□□□ -1.06
NUP88-205ENST00000572809 PPFIA1Q13136 1202 aa8.44□□□□□ -1.06
NUP88-205ENST00000572809 ITGB3BPQ13352 177 aaPredicted RBP8.44□□□□□ -1.06
NUP88-205ENST00000572809 MBTPS1Q14703 1052 aa8.44□□□□□ -1.06
NUP88-205ENST00000572809 PLPPR4Q7Z2D5 763 aa8.44□□□□□ -1.06
NUP88-205ENST00000572809 DBF4BQ8NFT6 615 aa8.44□□□□□ -1.06
NUP88-205ENST00000572809 RASGRP4Q8TDF6 673 aa8.44□□□□□ -1.06
NUP88-205ENST00000572809 LMBR1Q8WVP7 490 aa8.44□□□□□ -1.06
NUP88-205ENST00000572809 CRYGNQ8WXF5 182 aa8.44□□□□□ -1.06
NUP88-205ENST00000572809 PCYT2Q99447 389 aa8.44□□□□□ -1.06
NUP88-205ENST00000572809 SLKQ9H2G2 1235 aaPredicted RBP8.44□□□□□ -1.06
NUP88-205ENST00000572809 TBC1D22BQ9NU19 505 aa8.44□□□□□ -1.06
NUP88-205ENST00000572809 EMSYQ7Z589 1322 aa8.44□□□□□ -1.06
NUP88-205ENST00000572809 IGLV3-22A0A075B6J6 115 aa8.43□□□□□ -1.06
NUP88-205ENST00000572809 DDX39AO00148 427 aaKnown RBP8.43□□□□□ -1.06
NUP88-205ENST00000572809 IPO5O00410 1097 aaKnown RBP8.43□□□□□ -1.06
NUP88-205ENST00000572809 DHX15O43143 795 aaKnown RBP8.43□□□□□ -1.06
NUP88-205ENST00000572809 EFCAB14O75071 495 aa8.43□□□□□ -1.06
NUP88-205ENST00000572809 INSRRP14616 1297 aa8.43□□□□□ -1.06
NUP88-205ENST00000572809 CIITAP33076 1130 aa8.43□□□□□ -1.06
NUP88-205ENST00000572809 USP11P51784 963 aa8.43□□□□□ -1.06
NUP88-205ENST00000572809 WDR5P61964 334 aaKnown RBP8.43□□□□□ -1.06
NUP88-205ENST00000572809 KCNA1Q09470 495 aa8.43□□□□□ -1.06
NUP88-205ENST00000572809 SCRN1Q12765 414 aa8.43□□□□□ -1.06
NUP88-205ENST00000572809 ANKRD1Q15327 319 aa8.43□□□□□ -1.06
NUP88-205ENST00000572809 GRIK4Q16099 956 aa8.43□□□□□ -1.06
NUP88-205ENST00000572809 TCTN1Q2MV58 587 aa8.43□□□□□ -1.06
NUP88-205ENST00000572809 PRR16Q569H4 304 aa8.43□□□□□ -1.06
NUP88-205ENST00000572809 FAM26DQ5JW98 314 aa8.43□□□□□ -1.06
NUP88-205ENST00000572809 MARCH8Q5T0T0 291 aa8.43□□□□□ -1.06
NUP88-205ENST00000572809 ABHD15Q6UXT9 468 aa8.43□□□□□ -1.06
NUP88-205ENST00000572809 RSPH3Q86UC2 560 aa8.43□□□□□ -1.06
NUP88-205ENST00000572809 HERC6Q8IVU3 1022 aa8.43□□□□□ -1.06
NUP88-205ENST00000572809 PLPP7Q8NBV4 271 aa8.43□□□□□ -1.06
NUP88-205ENST00000572809 MAFAQ8NHW3 353 aaPredicted RBP8.43□□□□□ -1.06
NUP88-205ENST00000572809 UIMC1Q96RL1 719 aa8.43□□□□□ -1.06
NUP88-205ENST00000572809 GAS2L1Q99501 681 aaPredicted RBP8.43□□□□□ -1.06
NUP88-205ENST00000572809 ZNF577Q9BSK1 485 aa8.43□□□□□ -1.06
NUP88-205ENST00000572809 PRDM12Q9H4Q4 367 aa8.43□□□□□ -1.06
NUP88-205ENST00000572809 TPCN1Q9ULQ1 816 aa8.43□□□□□ -1.06
NUP88-205ENST00000572809 PCDHA4Q9UN74 947 aa8.43□□□□□ -1.06
NUP88-205ENST00000572809 IGKV6D-21A0A0A0MT36 114 aa8.42□□□□□ -1.06
NUP88-205ENST00000572809 BACH1O14867 736 aa8.42□□□□□ -1.06
NUP88-205ENST00000572809 EDIL3O43854 480 aa8.42□□□□□ -1.06
NUP88-205ENST00000572809 PFKFB2O60825 505 aa8.42□□□□□ -1.06
NUP88-205ENST00000572809 CDKL5O76039 1030 aa8.42□□□□□ -1.06
NUP88-205ENST00000572809 CCNE2O96020 404 aa8.42□□□□□ -1.06
NUP88-205ENST00000572809 CA3P07451 260 aa8.42□□□□□ -1.06
NUP88-205ENST00000572809 CTSHP09668 335 aa8.42□□□□□ -1.06
NUP88-205ENST00000572809 SLC26A2P50443 739 aa8.42□□□□□ -1.06
NUP88-205ENST00000572809 AK2P54819 239 aa8.42□□□□□ -1.06
NUP88-205ENST00000572809 IGBP1P78318 339 aa8.42□□□□□ -1.06
NUP88-205ENST00000572809 SETQ01105 290 aaPredicted RBP8.42□□□□□ -1.06
NUP88-205ENST00000572809 PLCB4Q15147 1175 aa8.42□□□□□ -1.06
NUP88-205ENST00000572809 EML3Q32P44 896 aa8.42□□□□□ -1.06
NUP88-205ENST00000572809 PLEKHG4Q58EX7 1191 aa8.42□□□□□ -1.06
NUP88-205ENST00000572809 FAM160B1Q5W0V3 765 aa8.42□□□□□ -1.06
NUP88-205ENST00000572809 GALNT17Q6IS24 598 aa8.42□□□□□ -1.06
NUP88-205ENST00000572809 SWSAP1Q6NVH7 229 aa8.42□□□□□ -1.06
NUP88-205ENST00000572809 MIS18BP1Q6P0N0 1132 aa8.42□□□□□ -1.06
NUP88-205ENST00000572809 TAF2Q6P1X5 1199 aa8.42□□□□□ -1.06
NUP88-205ENST00000572809 RUFY4Q6ZNE9 571 aa8.42□□□□□ -1.06
NUP88-205ENST00000572809 RPAINQ86UA6 219 aa8.42□□□□□ -1.06
NUP88-205ENST00000572809 BLIDQ8IZY5 108 aa8.42□□□□□ -1.06
NUP88-205ENST00000572809 DEPDC4Q8N2C3 294 aa8.42□□□□□ -1.06
NUP88-205ENST00000572809 DNAJB3Q8WWF6 145 aa8.42□□□□□ -1.06
NUP88-205ENST00000572809 SEPT8Q92599 483 aa8.42□□□□□ -1.06
NUP88-205ENST00000572809 CDK15Q96Q40 435 aa8.42□□□□□ -1.06
NUP88-205ENST00000572809 C22orf23Q9BZE7 217 aa8.42□□□□□ -1.06
NUP88-205ENST00000572809 OSBPL7Q9BZF2 842 aa8.42□□□□□ -1.06
NUP88-205ENST00000572809 ZNF302Q9NR11 478 aa8.42□□□□□ -1.06
NUP88-205ENST00000572809 TUBE1Q9UJT0 475 aa8.42□□□□□ -1.06
NUP88-205ENST00000572809 TET1Q8NFU7 2136 aa8.42□□□□□ -1.06
NUP88-205ENST00000572809 MBLAC1A4D2B0 266 aaPredicted RBP8.41□□□□□ -1.06
NUP88-205ENST00000572809 RBAK-RBAKDNI3L0D1 243 aa8.41□□□□□ -1.06
NUP88-205ENST00000572809 HBP1O60381 514 aa8.41□□□□□ -1.06
NUP88-205ENST00000572809 UPP2O95045 317 aa8.41□□□□□ -1.06
NUP88-205ENST00000572809 GJB5O95377 273 aa8.41□□□□□ -1.06
NUP88-205ENST00000572809 CHRNA1P02708 482 aa8.41□□□□□ -1.06
NUP88-205ENST00000572809 AMHP03971 560 aa8.41□□□□□ -1.06
NUP88-205ENST00000572809 RPLP2P05387 115 aaKnown RBP8.41□□□□□ -1.06
NUP88-205ENST00000572809 XBP1P17861 261 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms