RNA–Protein interactions for RNA: ENST00000572723.1

PRPF8-206, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-206ENST00000572723 AIFM3Q96NN9 605 aa13.19□□□□□ -0.3
PRPF8-206ENST00000572723 TMEM117Q9H0C3 514 aa13.19□□□□□ -0.3
PRPF8-206ENST00000572723 SLKQ9H2G2 1235 aaPredicted RBP13.19□□□□□ -0.3
PRPF8-206ENST00000572723 ARIH1Q9Y4X5 557 aaPredicted RBP13.19□□□□□ -0.3
PRPF8-206ENST00000572723 IGKV6-21A0A0C4DH24 114 aa13.18□□□□□ -0.3
PRPF8-206ENST00000572723 MBTPS2O43462 519 aa13.18□□□□□ -0.3
PRPF8-206ENST00000572723 PFKFB2O60825 505 aa13.18□□□□□ -0.3
PRPF8-206ENST00000572723 STBD1O95210 358 aa13.18□□□□□ -0.3
PRPF8-206ENST00000572723 EOMESO95936 686 aa13.18□□□□□ -0.3
PRPF8-206ENST00000572723 IRS1P35568 1242 aa13.18□□□□□ -0.3
PRPF8-206ENST00000572723 DNM2P50570 870 aa13.18□□□□□ -0.3
PRPF8-206ENST00000572723 ANAPC15P60006 121 aa13.18□□□□□ -0.3
PRPF8-206ENST00000572723 ZP2Q05996 745 aa13.18□□□□□ -0.3
PRPF8-206ENST00000572723 SCRN1Q12765 414 aa13.18□□□□□ -0.3
PRPF8-206ENST00000572723 PPP4R3AQ6IN85 833 aa13.18□□□□□ -0.3
PRPF8-206ENST00000572723 PPP4R3CPQ6ZMV5 832 aa13.18□□□□□ -0.3
PRPF8-206ENST00000572723 COLGALT1Q8NBJ5 622 aa13.18□□□□□ -0.3
PRPF8-206ENST00000572723 MICAL1Q8TDZ2 1067 aa13.18□□□□□ -0.3
PRPF8-206ENST00000572723 FAM20AQ96MK3 541 aa13.18□□□□□ -0.3
PRPF8-206ENST00000572723 CEP89Q96ST8 783 aa13.18□□□□□ -0.3
PRPF8-206ENST00000572723 PHF20Q9BVI0 1012 aa13.18□□□□□ -0.3
PRPF8-206ENST00000572723 GCOM2Q9BZD3 368 aaPredicted RBP13.18□□□□□ -0.3
PRPF8-206ENST00000572723 CWH43Q9H720 699 aa13.18□□□□□ -0.3
PRPF8-206ENST00000572723 CHST12Q9NRB3 414 aa13.18□□□□□ -0.3
PRPF8-206ENST00000572723 DDX25Q9UHL0 483 aaKnown RBP13.18□□□□□ -0.3
PRPF8-206ENST00000572723 RAPGEFL1Q9UHV5 662 aa13.18□□□□□ -0.3
PRPF8-206ENST00000572723 PUF60Q9UHX1 559 aaKnown RBP13.18□□□□□ -0.3
PRPF8-206ENST00000572723 CD207Q9UJ71 328 aa13.18□□□□□ -0.3
PRPF8-206ENST00000572723 KCNJ14Q9UNX9 436 aa13.18□□□□□ -0.3
PRPF8-206ENST00000572723 LZTS1Q9Y250 596 aa13.18□□□□□ -0.3
PRPF8-206ENST00000572723 PLXNA4Q9HCM2 1894 aa13.17□□□□□ -0.3
PRPF8-206ENST00000572723 A0A0U1RQF3 1178 aa13.17□□□□□ -0.3
PRPF8-206ENST00000572723 CCDC194A0A1B0GVG4 234 aa13.17□□□□□ -0.3
PRPF8-206ENST00000572723 FSD2A1L4K1 749 aa13.17□□□□□ -0.3
PRPF8-206ENST00000572723 DDX11L8A8MPP1 907 aa13.17□□□□□ -0.3
PRPF8-206ENST00000572723 LINC01565O15544 149 aa13.17□□□□□ -0.3
PRPF8-206ENST00000572723 DKC1O60832 514 aaKnown RBP eCLIP13.17□□□□□ -0.3
PRPF8-206ENST00000572723 FGF18O76093 207 aa13.17□□□□□ -0.3
PRPF8-206ENST00000572723 EYA4O95677 639 aa13.17□□□□□ -0.3
PRPF8-206ENST00000572723 FGFR1P11362 822 aa13.17□□□□□ -0.3
PRPF8-206ENST00000572723 GCFC2P16383 781 aaKnown RBP13.17□□□□□ -0.3
PRPF8-206ENST00000572723 LAG3P18627 525 aa13.17□□□□□ -0.3
PRPF8-206ENST00000572723 NRIP1P48552 1158 aa13.17□□□□□ -0.3
PRPF8-206ENST00000572723 NDUFV1P49821 464 aa13.17□□□□□ -0.3
PRPF8-206ENST00000572723 PSMC5P62195 406 aa13.17□□□□□ -0.3
PRPF8-206ENST00000572723 PLCB3Q01970 1234 aa13.17□□□□□ -0.3
PRPF8-206ENST00000572723 SMAD4Q13485 552 aaKnown RBP13.17□□□□□ -0.3
PRPF8-206ENST00000572723 ANKRD1Q15327 319 aa13.17□□□□□ -0.3
PRPF8-206ENST00000572723 INF2Q27J81 1249 aa13.17□□□□□ -0.3
PRPF8-206ENST00000572723 LETM2Q2VYF4 491 aa13.17□□□□□ -0.3
PRPF8-206ENST00000572723 MTERF2Q49AM1 385 aa13.17□□□□□ -0.3
PRPF8-206ENST00000572723 ECHDC2Q86YB7 292 aa13.17□□□□□ -0.3
PRPF8-206ENST00000572723 THNSL1Q8IYQ7 743 aa13.17□□□□□ -0.3
PRPF8-206ENST00000572723 NLRP7Q8WX94 980 aa13.17□□□□□ -0.3
PRPF8-206ENST00000572723 MSLNLQ96KJ4 702 aa13.17□□□□□ -0.3
PRPF8-206ENST00000572723 CASD1Q96PB1 797 aa13.17□□□□□ -0.3
PRPF8-206ENST00000572723 POP1Q99575 1024 aaKnown RBP13.17□□□□□ -0.3
PRPF8-206ENST00000572723 CDCA3Q99618 268 aaPredicted RBP13.17□□□□□ -0.3
PRPF8-206ENST00000572723 NAP1L4Q99733 375 aaKnown RBP13.17□□□□□ -0.3
PRPF8-206ENST00000572723 JPH2Q9BR39 696 aaPredicted RBP13.17□□□□□ -0.3
PRPF8-206ENST00000572723 INO80BQ9C086 356 aaPredicted RBP13.17□□□□□ -0.3
PRPF8-206ENST00000572723 TLE6Q9H808 572 aa13.17□□□□□ -0.3
PRPF8-206ENST00000572723 C11orf16Q9NQ32 467 aa13.17□□□□□ -0.3
PRPF8-206ENST00000572723 TLR9Q9NR96 1032 aa13.17□□□□□ -0.3
PRPF8-206ENST00000572723 DACT1Q9NYF0 836 aa13.17□□□□□ -0.3
PRPF8-206ENST00000572723 STK36Q9NRP7 1315 aa13.16□□□□□ -0.3
PRPF8-206ENST00000572723 TBX3O15119 743 aa13.16□□□□□ -0.3
PRPF8-206ENST00000572723 TBX10O75333 385 aa13.16□□□□□ -0.3
PRPF8-206ENST00000572723 CSPG5O95196 566 aa13.16□□□□□ -0.3
PRPF8-206ENST00000572723 QARSP47897 775 aaKnown RBP13.16□□□□□ -0.3
PRPF8-206ENST00000572723 ERVFC1P60507 584 aa13.16□□□□□ -0.3
PRPF8-206ENST00000572723 COASYQ13057 564 aa13.16□□□□□ -0.3
PRPF8-206ENST00000572723 PPP2R5CQ13362 524 aa13.16□□□□□ -0.3
PRPF8-206ENST00000572723 CLUL1Q15846 466 aa13.16□□□□□ -0.3
PRPF8-206ENST00000572723 LRRC55Q6ZSA7 311 aa13.16□□□□□ -0.3
PRPF8-206ENST00000572723 ADGRD2Q7Z7M1 963 aa13.16□□□□□ -0.3
PRPF8-206ENST00000572723 NEK8Q86SG6 692 aa13.16□□□□□ -0.3
PRPF8-206ENST00000572723 RBM23Q86U06 439 aaKnown RBP13.16□□□□□ -0.3
PRPF8-206ENST00000572723 EXOC8Q8IYI6 725 aa13.16□□□□□ -0.3
PRPF8-206ENST00000572723 ABI1Q8IZP0 508 aa13.16□□□□□ -0.3
PRPF8-206ENST00000572723 WASF1Q92558 559 aa13.16□□□□□ -0.3
PRPF8-206ENST00000572723 ZNF668Q96K58 619 aaPredicted RBP13.16□□□□□ -0.3
PRPF8-206ENST00000572723 SCLT1Q96NL6 688 aa13.16□□□□□ -0.3
PRPF8-206ENST00000572723 TRAIPQ9BWF2 469 aa13.16□□□□□ -0.3
PRPF8-206ENST00000572723 KCNMB3Q9NPA1 279 aa13.16□□□□□ -0.3
PRPF8-206ENST00000572723 RNF19AQ9NV58 838 aa13.16□□□□□ -0.3
PRPF8-206ENST00000572723 PPP4R2Q9NY27 417 aa13.16□□□□□ -0.3
PRPF8-206ENST00000572723 CLEC1BQ9P126 229 aa13.16□□□□□ -0.3
PRPF8-206ENST00000572723 SEPT9Q9UHD8 586 aaPredicted RBP13.16□□□□□ -0.3
PRPF8-206ENST00000572723 TPCN1Q9ULQ1 816 aa13.16□□□□□ -0.3
PRPF8-206ENST00000572723 A0A087WZ62 844 aa13.15□□□□□ -0.3
PRPF8-206ENST00000572723 PRR33A8MZF0 331 aa13.15□□□□□ -0.3
PRPF8-206ENST00000572723 EML1O00423 815 aa13.15□□□□□ -0.3
PRPF8-206ENST00000572723 FSCN2O14926 492 aa13.15□□□□□ -0.3
PRPF8-206ENST00000572723 DCXO43602 365 aa13.15□□□□□ -0.3
PRPF8-206ENST00000572723 SLC37A4O43826 429 aa13.15□□□□□ -0.3
PRPF8-206ENST00000572723 MAFO75444 373 aaPredicted RBP13.15□□□□□ -0.3
PRPF8-206ENST00000572723 P4HBP07237 508 aaKnown RBP13.15□□□□□ -0.3
PRPF8-206ENST00000572723 KRT17Q04695 432 aa13.15□□□□□ -0.3
PRPF8-206ENST00000572723 DRP2Q13474 957 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms