RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 WDR87Q6ZQQ6 2873 aa13.67□□□□□ -0.22
CAPN3-220ENST00000569827 TMEM150BA6NC51 233 aa13.67□□□□□ -0.22
CAPN3-220ENST00000569827 ZNF862O60290 1169 aa13.67□□□□□ -0.22
CAPN3-220ENST00000569827 ATF7P17544 494 aaPredicted RBP13.67□□□□□ -0.22
CAPN3-220ENST00000569827 METAP2P50579 478 aaKnown RBP eCLIP13.67□□□□□ -0.22
CAPN3-220ENST00000569827 FAM189BP81408 668 aa13.67□□□□□ -0.22
CAPN3-220ENST00000569827 DRP2Q13474 957 aa13.67□□□□□ -0.22
CAPN3-220ENST00000569827 PTPN21Q16825 1174 aa13.67□□□□□ -0.22
CAPN3-220ENST00000569827 PFKFB3Q16875 520 aaPredicted RBP13.67□□□□□ -0.22
CAPN3-220ENST00000569827 DHX32Q7L7V1 743 aaKnown RBP13.67□□□□□ -0.22
CAPN3-220ENST00000569827 ECHDC2Q86YB7 292 aa13.67□□□□□ -0.22
CAPN3-220ENST00000569827 LRRC43Q8N309 656 aa13.67□□□□□ -0.22
CAPN3-220ENST00000569827 C12orf76Q8N812 135 aaPredicted RBP13.67□□□□□ -0.22
CAPN3-220ENST00000569827 HELQQ8TDG4 1101 aa13.67□□□□□ -0.22
CAPN3-220ENST00000569827 PHKBQ93100 1093 aa13.67□□□□□ -0.22
CAPN3-220ENST00000569827 ZNF558Q96NG5 402 aa13.67□□□□□ -0.22
CAPN3-220ENST00000569827 SCLT1Q96NL6 688 aa13.67□□□□□ -0.22
CAPN3-220ENST00000569827 SH2D3AQ9BRG2 576 aa13.67□□□□□ -0.22
CAPN3-220ENST00000569827 ADAMTS10Q9H324 1103 aa13.67□□□□□ -0.22
CAPN3-220ENST00000569827 POMKQ9H5K3 350 aa13.67□□□□□ -0.22
CAPN3-220ENST00000569827 DOCK8Q8NF50 2099 aa13.67□□□□□ -0.22
CAPN3-220ENST00000569827 C2CD4DB7Z1M9 353 aa13.66□□□□□ -0.22
CAPN3-220ENST00000569827 ASGR2P07307 311 aa13.66□□□□□ -0.22
CAPN3-220ENST00000569827 PSAPP07602 524 aa13.66□□□□□ -0.22
CAPN3-220ENST00000569827 CYP3A4P08684 503 aa13.66□□□□□ -0.22
CAPN3-220ENST00000569827 PRKCEQ02156 737 aa13.66□□□□□ -0.22
CAPN3-220ENST00000569827 PKN1Q16512 942 aa13.66□□□□□ -0.22
CAPN3-220ENST00000569827 RNF20Q5VTR2 975 aa13.66□□□□□ -0.22
CAPN3-220ENST00000569827 ZNF746Q6NUN9 644 aaPredicted RBP13.66□□□□□ -0.22
CAPN3-220ENST00000569827 TMC7Q7Z402 723 aa13.66□□□□□ -0.22
CAPN3-220ENST00000569827 TMEM173Q86WV6 379 aaPredicted RBP13.66□□□□□ -0.22
CAPN3-220ENST00000569827 ABI1Q8IZP0 508 aa13.66□□□□□ -0.22
CAPN3-220ENST00000569827 REXO1Q8N1G1 1221 aaKnown RBP13.66□□□□□ -0.22
CAPN3-220ENST00000569827 LINC01465Q8N7H1 131 aa13.66□□□□□ -0.22
CAPN3-220ENST00000569827 LPPQ93052 612 aa13.66□□□□□ -0.22
CAPN3-220ENST00000569827 LENG9Q96B70 501 aa13.66□□□□□ -0.22
CAPN3-220ENST00000569827 MAP7D2Q96T17 732 aa13.66□□□□□ -0.22
CAPN3-220ENST00000569827 CDCA3Q99618 268 aaPredicted RBP13.66□□□□□ -0.22
CAPN3-220ENST00000569827 HCFC2Q9Y5Z7 792 aa13.66□□□□□ -0.22
CAPN3-220ENST00000569827 H0Y858 1186 aa13.65□□□□□ -0.22
CAPN3-220ENST00000569827 hCG_1984214I3L0E3 225 aa13.65□□□□□ -0.22
CAPN3-220ENST00000569827 EDIL3O43854 480 aa13.65□□□□□ -0.22
CAPN3-220ENST00000569827 OATP04181 439 aa13.65□□□□□ -0.22
CAPN3-220ENST00000569827 ZSCAN20P17040 1043 aaPredicted RBP13.65□□□□□ -0.22
CAPN3-220ENST00000569827 AVPR2P30518 371 aa13.65□□□□□ -0.22
CAPN3-220ENST00000569827 GPC3P51654 580 aa13.65□□□□□ -0.22
CAPN3-220ENST00000569827 FGD1P98174 961 aa13.65□□□□□ -0.22
CAPN3-220ENST00000569827 SETQ01105 290 aaPredicted RBP13.65□□□□□ -0.22
CAPN3-220ENST00000569827 PLCB3Q01970 1234 aa13.65□□□□□ -0.22
CAPN3-220ENST00000569827 ODR4Q5SWX8 454 aa13.65□□□□□ -0.22
CAPN3-220ENST00000569827 RARS2Q5T160 578 aaKnown RBP13.65□□□□□ -0.22
CAPN3-220ENST00000569827 Q6ZUG5 572 aa13.65□□□□□ -0.22
CAPN3-220ENST00000569827 SLC39A11Q8N1S5 342 aa13.65□□□□□ -0.22
CAPN3-220ENST00000569827 ZNF713Q8N859 430 aaPredicted RBP13.65□□□□□ -0.22
CAPN3-220ENST00000569827 KREMEN2Q8NCW0 462 aa13.65□□□□□ -0.22
CAPN3-220ENST00000569827 ELAC1Q9H777 363 aaKnown RBP13.65□□□□□ -0.22
CAPN3-220ENST00000569827 SPG21Q9NZD8 308 aa13.65□□□□□ -0.22
CAPN3-220ENST00000569827 PUF60Q9UHX1 559 aaKnown RBP13.65□□□□□ -0.22
CAPN3-220ENST00000569827 PCDHA10Q9Y5I2 948 aa13.65□□□□□ -0.22
CAPN3-220ENST00000569827 MTCL1Q9Y4B5 1905 aaKnown RBP13.64□□□□□ -0.23
CAPN3-220ENST00000569827 C2orf71A6NGG8 1288 aa13.64□□□□□ -0.23
CAPN3-220ENST00000569827 MEIS3P2A8K0S8 358 aa13.64□□□□□ -0.23
CAPN3-220ENST00000569827 GFRA3O60609 400 aa13.64□□□□□ -0.23
CAPN3-220ENST00000569827 CLASP2O75122 1294 aaKnown RBP13.64□□□□□ -0.23
CAPN3-220ENST00000569827 BRD1O95696 1058 aa13.64□□□□□ -0.23
CAPN3-220ENST00000569827 SRGAP2BP0DMP2 458 aa13.64□□□□□ -0.23
CAPN3-220ENST00000569827 EIF4BP23588 611 aaKnown RBP13.64□□□□□ -0.23
CAPN3-220ENST00000569827 MTERF2Q49AM1 385 aa13.64□□□□□ -0.23
CAPN3-220ENST00000569827 TMEM184AQ6ZMB5 413 aa13.64□□□□□ -0.23
CAPN3-220ENST00000569827 SMAP1Q8IYB5 467 aaPredicted RBP13.64□□□□□ -0.23
CAPN3-220ENST00000569827 BCL7CQ8WUZ0 217 aaPredicted RBP13.64□□□□□ -0.23
CAPN3-220ENST00000569827 NLRP7Q8WX94 980 aa13.64□□□□□ -0.23
CAPN3-220ENST00000569827 ATOH1Q92858 354 aaPredicted RBP13.64□□□□□ -0.23
CAPN3-220ENST00000569827 BRF1Q92994 677 aa13.64□□□□□ -0.23
CAPN3-220ENST00000569827 ZMYND12Q9H0C1 365 aa13.64□□□□□ -0.23
CAPN3-220ENST00000569827 UNC45AQ9H3U1 944 aa13.64□□□□□ -0.23
CAPN3-220ENST00000569827 C6orf50Q9HD87 102 aa13.64□□□□□ -0.23
CAPN3-220ENST00000569827 DISC1Q9NRI5 854 aa13.64□□□□□ -0.23
CAPN3-220ENST00000569827 TBC1D22BQ9NU19 505 aa13.64□□□□□ -0.23
CAPN3-220ENST00000569827 VPS54Q9P1Q0 977 aa13.64□□□□□ -0.23
CAPN3-220ENST00000569827 LZTS1Q9Y250 596 aa13.64□□□□□ -0.23
CAPN3-220ENST00000569827 DCHS1Q96JQ0 3298 aa13.64□□□□□ -0.23
CAPN3-220ENST00000569827 WDR64B1ANS9 1081 aa13.63□□□□□ -0.23
CAPN3-220ENST00000569827 MSH4O15457 936 aa13.63□□□□□ -0.23
CAPN3-220ENST00000569827 ZC3H11AO75152 810 aaKnown RBP eCLIP13.63□□□□□ -0.23
CAPN3-220ENST00000569827 EPCAMP16422 314 aa13.63□□□□□ -0.23
CAPN3-220ENST00000569827 BCAR1P56945 870 aa13.63□□□□□ -0.23
CAPN3-220ENST00000569827 KRT17Q04695 432 aa13.63□□□□□ -0.23
CAPN3-220ENST00000569827 SMC1AQ14683 1233 aaKnown RBP13.63□□□□□ -0.23
CAPN3-220ENST00000569827 PDE12Q6L8Q7 609 aaKnown RBP13.63□□□□□ -0.23
CAPN3-220ENST00000569827 ZNF598Q86UK7 904 aaKnown RBP13.63□□□□□ -0.23
CAPN3-220ENST00000569827 GBP3Q9H0R5 595 aa13.63□□□□□ -0.23
CAPN3-220ENST00000569827 GLT8D2Q9H1C3 349 aa13.63□□□□□ -0.23
CAPN3-220ENST00000569827 NGRNQ9NPE2 291 aaKnown RBP13.63□□□□□ -0.23
CAPN3-220ENST00000569827 SEPT9Q9UHD8 586 aaPredicted RBP13.63□□□□□ -0.23
CAPN3-220ENST00000569827 CEP131Q9UPN4 1083 aa13.63□□□□□ -0.23
CAPN3-220ENST00000569827 INPP5FQ9Y2H2 1132 aa13.63□□□□□ -0.23
CAPN3-220ENST00000569827 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.62□□□□□ -0.23
CAPN3-220ENST00000569827 ESYT2A0FGR8 921 aa13.62□□□□□ -0.23
CAPN3-220ENST00000569827 MAGEB2O15479 319 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms