RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 PIGOQ8TEQ8 1089 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 ATRIPQ8WXE1 791 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 TATDN2Q93075 761 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 KLRG1Q96E93 195 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 TRERF1Q96PN7 1200 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 PDCD2LQ9BRP1 358 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 LACRTQ9GZZ8 138 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 RPAP3Q9H6T3 665 aaPredicted RBP5.91□□□□□ -1.46
SF3B3-213ENST00000569687 RAVER2Q9HCJ3 691 aaKnown RBP5.91□□□□□ -1.46
SF3B3-213ENST00000569687 PICK1Q9NRD5 415 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 ANKEF1Q9NU02 776 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 OGFRQ9NZT2 677 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 WRAP73Q9P2S5 460 aaPredicted RBP5.91□□□□□ -1.46
SF3B3-213ENST00000569687 DDX41Q9UJV9 622 aaKnown RBP5.91□□□□□ -1.46
SF3B3-213ENST00000569687 PNMA3Q9UL41 463 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 PCDHA13Q9Y5I0 950 aa5.91□□□□□ -1.46
SF3B3-213ENST00000569687 ANO9A1A5B4 782 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 ARHGEF35A5YM69 484 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 LRRC53A6NM62 1247 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 BTNL10A8MVZ5 291 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 RSPH10B2B2RC85 870 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 POTEB2H3BUK9 544 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 ZNF263O14978 683 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 ZBTB39O15060 712 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 MAPK13O15264 365 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 PMM2O15305 246 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 AKR1B10O60218 316 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 GRIN3BO60391 1043 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 TLR2O60603 784 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 DKC1O60832 514 aaKnown RBP eCLIP5.9□□□□□ -1.46
SF3B3-213ENST00000569687 AKAP3O75969 853 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 DDNO94850 711 aaPredicted RBP5.9□□□□□ -1.46
SF3B3-213ENST00000569687 RSPH10BP0C881 870 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 EPB41P11171 864 aaKnown RBP5.9□□□□□ -1.46
SF3B3-213ENST00000569687 XRCC5P13010 732 aaKnown RBP5.9□□□□□ -1.46
SF3B3-213ENST00000569687 PON1P27169 355 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 PSMC2P35998 433 aaKnown RBP5.9□□□□□ -1.46
SF3B3-213ENST00000569687 PRKCIP41743 596 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 GCGRP47871 477 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 JAK3P52333 1124 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 HIRAP54198 1017 aaPredicted RBP5.9□□□□□ -1.46
SF3B3-213ENST00000569687 USP46P62068 366 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 KRT76Q01546 638 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 GUCA2AQ02747 115 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 ENPEPQ07075 957 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 RAD51AP2Q09MP3 1159 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 MTMR2Q13614 643 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 PGM5Q15124 567 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 PPP2R5AQ15172 486 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 ELF2Q15723 593 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 GPR162Q16538 588 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 SLC9C1Q4G0N8 1177 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 ARSIQ5FYB1 569 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 MUM1L1Q5H9M0 696 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 ANGEL2Q5VTE6 544 aaKnown RBP5.9□□□□□ -1.46
SF3B3-213ENST00000569687 SFMBT2Q5VUG0 894 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 ZNF746Q6NUN9 644 aaPredicted RBP5.9□□□□□ -1.46
SF3B3-213ENST00000569687 FBXO38Q6PIJ6 1188 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 GBP6Q6ZN66 633 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 RNF207Q6ZRF8 634 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 CACNA2D4Q7Z3S7 1137 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 IRF2BP2Q7Z5L9 587 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 KIAA1328Q86T90 577 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 FAM178BQ8IXR5 827 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 CPXCR1Q8N123 301 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 DAW1Q8N136 415 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 IL31RAQ8NI17 732 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 TRPM4Q8TD43 1214 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 SMCR8Q8TEV9 937 aaPredicted RBP5.9□□□□□ -1.46
SF3B3-213ENST00000569687 HNRNPLLQ8WVV9 542 aaKnown RBP5.9□□□□□ -1.46
SF3B3-213ENST00000569687 GOLGA1Q92805 767 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 KCNN1Q92952 543 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 HLA-CQ95604 372 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 SLC35C1Q96A29 364 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 JAKMIP2Q96AA8 810 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 VTI1AQ96AJ9 217 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 GPRASP2Q96D09 838 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 RPGRIP1Q96KN7 1286 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 DCBLD2Q96PD2 775 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 IWS1Q96ST2 819 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 RMDN3Q96TC7 470 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 LXNQ9BS40 222 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 NTPCRQ9BSD7 190 aaKnown RBP5.9□□□□□ -1.46
SF3B3-213ENST00000569687 TANGO6Q9C0B7 1094 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 GANQ9H2C0 597 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 ZHX3Q9H4I2 956 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 TMEM206Q9H813 350 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 PXMP2Q9NR77 195 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 FAM207AQ9NSI2 230 aaPredicted RBP5.9□□□□□ -1.46
SF3B3-213ENST00000569687 KCNG1Q9UIX4 513 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 METRNQ9UJH8 293 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 RAB21Q9UL25 225 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 USP20Q9Y2K6 914 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 AFG3L2Q9Y4W6 797 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 CTDP1Q9Y5B0 961 aaPredicted RBP5.9□□□□□ -1.46
SF3B3-213ENST00000569687 ZHX2Q9Y6X8 837 aa5.9□□□□□ -1.46
SF3B3-213ENST00000569687 ASTN1O14525 1302 aa5.9□□□□□ -1.47
SF3B3-213ENST00000569687 ATP8B3O60423 1300 aa5.9□□□□□ -1.47
SF3B3-213ENST00000569687 ASTN2O75129 1339 aaPredicted RBP5.9□□□□□ -1.47
SF3B3-213ENST00000569687 ZC3H4Q9UPT8 1303 aaKnown RBP5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms