RNA–Protein interactions for RNA: ENST00000569124.1

SCAMP2-210, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 4

Gene SCAMP2, Length 538 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-210ENST00000569124 RILPL1Q5EBL4 403 aa17.41■□□□□ 0.38
SCAMP2-210ENST00000569124 SPOUT1Q5T280 376 aaKnown RBP17.41■□□□□ 0.38
SCAMP2-210ENST00000569124 TBCKQ8TEA7 893 aa17.41■□□□□ 0.38
SCAMP2-210ENST00000569124 EDAQ92838 391 aa17.41■□□□□ 0.38
SCAMP2-210ENST00000569124 NAP1L4Q99733 375 aaKnown RBP17.41■□□□□ 0.38
SCAMP2-210ENST00000569124 RNF216Q9NWF9 866 aaPredicted RBP17.41■□□□□ 0.38
SCAMP2-210ENST00000569124 FSD2A1L4K1 749 aa17.4■□□□□ 0.38
SCAMP2-210ENST00000569124 ADAMTS3O15072 1205 aa17.4■□□□□ 0.38
SCAMP2-210ENST00000569124 TRAPPC10P48553 1259 aa17.4■□□□□ 0.38
SCAMP2-210ENST00000569124 SARSP49591 514 aaKnown RBP17.4■□□□□ 0.38
SCAMP2-210ENST00000569124 GATMP50440 423 aa17.4■□□□□ 0.38
SCAMP2-210ENST00000569124 SLC26A2P50443 739 aa17.4■□□□□ 0.38
SCAMP2-210ENST00000569124 NFX1Q12986 1120 aaKnown RBP17.4■□□□□ 0.38
SCAMP2-210ENST00000569124 INF2Q27J81 1249 aa17.4■□□□□ 0.38
SCAMP2-210ENST00000569124 MTHFD1LQ6UB35 978 aa17.4■□□□□ 0.38
SCAMP2-210ENST00000569124 NEK8Q86SG6 692 aa17.4■□□□□ 0.38
SCAMP2-210ENST00000569124 RBM23Q86U06 439 aaKnown RBP17.4■□□□□ 0.38
SCAMP2-210ENST00000569124 NME8Q8N427 588 aa17.4■□□□□ 0.38
SCAMP2-210ENST00000569124 AAASQ9NRG9 546 aa17.4■□□□□ 0.38
SCAMP2-210ENST00000569124 CLEC1BQ9P126 229 aa17.4■□□□□ 0.38
SCAMP2-210ENST00000569124 BARX2Q9UMQ3 279 aaPredicted RBP17.4■□□□□ 0.38
SCAMP2-210ENST00000569124 GINS2Q9Y248 185 aa17.4■□□□□ 0.38
SCAMP2-210ENST00000569124 PCDHB7Q9Y5E2 793 aa17.4■□□□□ 0.38
SCAMP2-210ENST00000569124 PCDHB12Q9Y5F1 795 aa17.4■□□□□ 0.38
SCAMP2-210ENST00000569124 GLP2RO95838 553 aa17.39■□□□□ 0.37
SCAMP2-210ENST00000569124 ZNF76P36508 570 aa17.39■□□□□ 0.37
SCAMP2-210ENST00000569124 SREBF1P36956 1147 aa17.39■□□□□ 0.37
SCAMP2-210ENST00000569124 USP11P51784 963 aa17.39■□□□□ 0.37
SCAMP2-210ENST00000569124 UBE3AQ05086 875 aa17.39■□□□□ 0.37
SCAMP2-210ENST00000569124 TMEM266Q2M3C6 531 aa17.39■□□□□ 0.37
SCAMP2-210ENST00000569124 ODR4Q5SWX8 454 aa17.39■□□□□ 0.37
SCAMP2-210ENST00000569124 FAM160B1Q5W0V3 765 aa17.39■□□□□ 0.37
SCAMP2-210ENST00000569124 FAM43BQ6ZT52 329 aaPredicted RBP17.39■□□□□ 0.37
SCAMP2-210ENST00000569124 ZNF396Q96N95 335 aaPredicted RBP17.39■□□□□ 0.37
SCAMP2-210ENST00000569124 TMX1Q9H3N1 280 aa17.39■□□□□ 0.37
SCAMP2-210ENST00000569124 TLR9Q9NR96 1032 aa17.39■□□□□ 0.37
SCAMP2-210ENST00000569124 C1orf112Q9NSG2 853 aa17.39■□□□□ 0.37
SCAMP2-210ENST00000569124 ZDHHC9Q9Y397 364 aa17.39■□□□□ 0.37
SCAMP2-210ENST00000569124 USP15Q9Y4E8 981 aaPredicted RBP17.39■□□□□ 0.37
SCAMP2-210ENST00000569124 COL1A2P08123 1366 aa17.39■□□□□ 0.37
SCAMP2-210ENST00000569124 TCHHQ07283 1943 aa17.39■□□□□ 0.37
SCAMP2-210ENST00000569124 DENND3A2RUS2 1198 aa17.38■□□□□ 0.37
SCAMP2-210ENST00000569124 TMEM221A6NGB7 291 aa17.38■□□□□ 0.37
SCAMP2-210ENST00000569124 LOC730098B7Z3J9 87 aa17.38■□□□□ 0.37
SCAMP2-210ENST00000569124 M0R296 226 aa17.38■□□□□ 0.37
SCAMP2-210ENST00000569124 BACH1O14867 736 aa17.38■□□□□ 0.37
SCAMP2-210ENST00000569124 RPS6KA5O75582 802 aa17.38■□□□□ 0.37
SCAMP2-210ENST00000569124 ARP10275 920 aa17.38■□□□□ 0.37
SCAMP2-210ENST00000569124 ATP2B1P20020 1258 aa17.38■□□□□ 0.37
SCAMP2-210ENST00000569124 LETM2Q2VYF4 491 aa17.38■□□□□ 0.37
SCAMP2-210ENST00000569124 CEP55Q53EZ4 464 aa17.38■□□□□ 0.37
SCAMP2-210ENST00000569124 EARS2Q5JPH6 523 aaKnown RBP17.38■□□□□ 0.37
SCAMP2-210ENST00000569124 SUGP1Q8IWZ8 645 aaKnown RBP17.38■□□□□ 0.37
SCAMP2-210ENST00000569124 CYP2W1Q8TAV3 490 aa17.38■□□□□ 0.37
SCAMP2-210ENST00000569124 MICAL1Q8TDZ2 1067 aa17.38■□□□□ 0.37
SCAMP2-210ENST00000569124 TLE6Q9H808 572 aa17.38■□□□□ 0.37
SCAMP2-210ENST00000569124 AGO4Q9HCK5 861 aaKnown RBP17.38■□□□□ 0.37
SCAMP2-210ENST00000569124 ERVK-5Q9HDB9 667 aa17.38■□□□□ 0.37
SCAMP2-210ENST00000569124 PCDHGC5Q9Y5F6 944 aa17.38■□□□□ 0.37
SCAMP2-210ENST00000569124 CACNA1HO95180 2353 aa17.37■□□□□ 0.37
SCAMP2-210ENST00000569124 FAM205CA6NFA0 338 aa17.37■□□□□ 0.37
SCAMP2-210ENST00000569124 TBKBP1A7MCY6 615 aa17.37■□□□□ 0.37
SCAMP2-210ENST00000569124 DDX39AO00148 427 aaKnown RBP17.37■□□□□ 0.37
SCAMP2-210ENST00000569124 HBP1O60381 514 aa17.37■□□□□ 0.37
SCAMP2-210ENST00000569124 SRGAP2BP0DMP2 458 aa17.37■□□□□ 0.37
SCAMP2-210ENST00000569124 GCFC2P16383 781 aaKnown RBP17.37■□□□□ 0.37
SCAMP2-210ENST00000569124 KLRC1P26715 233 aa17.37■□□□□ 0.37
SCAMP2-210ENST00000569124 ITGB3BPQ13352 177 aaPredicted RBP17.37■□□□□ 0.37
SCAMP2-210ENST00000569124 TTC38Q5R3I4 469 aa17.37■□□□□ 0.37
SCAMP2-210ENST00000569124 ATL3Q6DD88 541 aa17.37■□□□□ 0.37
SCAMP2-210ENST00000569124 TRIM67Q6ZTA4 783 aa17.37■□□□□ 0.37
SCAMP2-210ENST00000569124 BMP8AQ7Z5Y6 402 aa17.37■□□□□ 0.37
SCAMP2-210ENST00000569124 THNSL1Q8IYQ7 743 aa17.37■□□□□ 0.37
SCAMP2-210ENST00000569124 ATP8B4Q8TF62 1192 aa17.37■□□□□ 0.37
SCAMP2-210ENST00000569124 PBXIP1Q96AQ6 731 aa17.37■□□□□ 0.37
SCAMP2-210ENST00000569124 PHF7Q9BWX1 381 aaPredicted RBP17.37■□□□□ 0.37
SCAMP2-210ENST00000569124 DENND4AQ7Z401 1863 aa17.37■□□□□ 0.37
SCAMP2-210ENST00000569124 MGEA5O60502 916 aa17.36■□□□□ 0.37
SCAMP2-210ENST00000569124 CCNT1O60563 726 aaKnown RBP17.36■□□□□ 0.37
SCAMP2-210ENST00000569124 ATG7O95352 703 aa17.36■□□□□ 0.37
SCAMP2-210ENST00000569124 CYP3A4P08684 503 aa17.36■□□□□ 0.37
SCAMP2-210ENST00000569124 FOXD4L6Q3SYB3 417 aaPredicted RBP17.36■□□□□ 0.37
SCAMP2-210ENST00000569124 FOXD4L3Q6VB84 417 aaPredicted RBP17.36■□□□□ 0.37
SCAMP2-210ENST00000569124 CDCA3Q99618 268 aaPredicted RBP17.36■□□□□ 0.37
SCAMP2-210ENST00000569124 PRRX2Q99811 253 aa17.36■□□□□ 0.37
SCAMP2-210ENST00000569124 ADAM2Q99965 735 aa17.36■□□□□ 0.37
SCAMP2-210ENST00000569124 CFAP45Q9UL16 551 aa17.36■□□□□ 0.37
SCAMP2-210ENST00000569124 CEP131Q9UPN4 1083 aa17.36■□□□□ 0.37
SCAMP2-210ENST00000569124 NOC2LQ9Y3T9 749 aaKnown RBP17.36■□□□□ 0.37
SCAMP2-210ENST00000569124 PLXNA3P51805 1871 aa17.35■□□□□ 0.37
SCAMP2-210ENST00000569124 IGKV6D-21A0A0A0MT36 114 aa17.35■□□□□ 0.37
SCAMP2-210ENST00000569124 GPR182O15218 404 aa17.35■□□□□ 0.37
SCAMP2-210ENST00000569124 FGF18O76093 207 aa17.35■□□□□ 0.37
SCAMP2-210ENST00000569124 BMP15O95972 392 aa17.35■□□□□ 0.37
SCAMP2-210ENST00000569124 NCLP19338 710 aaKnown RBP17.35■□□□□ 0.37
SCAMP2-210ENST00000569124 PTPN5P54829 565 aa17.35■□□□□ 0.37
SCAMP2-210ENST00000569124 KRT85P78386 507 aa17.35■□□□□ 0.37
SCAMP2-210ENST00000569124 ZXDAP98168 799 aa17.35■□□□□ 0.37
SCAMP2-210ENST00000569124 ORC2Q13416 577 aaPredicted RBP17.35■□□□□ 0.37
SCAMP2-210ENST00000569124 CBX2Q14781 532 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms