RNA–Protein interactions for RNA: ENST00000568945.2

MKRN3-204, Transcript of makorin ring finger protein 3, human

TSL 4

Gene MKRN3, Length 2,740 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MKRN3-204	ENST00000568945		A0A1B0GVC2	190 aa		10.85	□□□□□ -0.67
MKRN3-204	ENST00000568945	HOXB1	P14653	301 aa	Predicted RBP	10.85	□□□□□ -0.67
MKRN3-204	ENST00000568945	FGFR4	P22455	802 aa		10.85	□□□□□ -0.67
MKRN3-204	ENST00000568945	TRIM23	P36406	574 aa		10.85	□□□□□ -0.67
MKRN3-204	ENST00000568945	DGKG	P49619	791 aa		10.85	□□□□□ -0.67
MKRN3-204	ENST00000568945	TRPC3	Q13507	836 aa		10.85	□□□□□ -0.67
MKRN3-204	ENST00000568945	CEP55	Q53EZ4	464 aa		10.85	□□□□□ -0.67
MKRN3-204	ENST00000568945	CWC27	Q6UX04	472 aa	Known RBP	10.85	□□□□□ -0.67
MKRN3-204	ENST00000568945	DIS3L	Q8TF46	1054 aa	Known RBP	10.85	□□□□□ -0.67
MKRN3-204	ENST00000568945	BAP1	Q92560	729 aa		10.85	□□□□□ -0.67
MKRN3-204	ENST00000568945	TBCB	Q99426	244 aa		10.85	□□□□□ -0.67
MKRN3-204	ENST00000568945	C8orf4	Q9NR00	106 aa		10.85	□□□□□ -0.67
MKRN3-204	ENST00000568945	SIRPG	Q9P1W8	387 aa		10.85	□□□□□ -0.67
MKRN3-204	ENST00000568945	PHTF1	Q9UMS5	762 aa		10.85	□□□□□ -0.67
MKRN3-204	ENST00000568945	PCDHB3	Q9Y5E6	796 aa		10.85	□□□□□ -0.67
MKRN3-204	ENST00000568945	PCDHB12	Q9Y5F1	795 aa		10.85	□□□□□ -0.67
MKRN3-204	ENST00000568945	ZNF536	O15090	1300 aa		10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	CTAGE9	A4FU28	777 aa		10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	ST8SIA5	O15466	376 aa		10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	FGF18	O76093	207 aa		10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	GOSR1	O95249	250 aa		10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	HSPA6	P17066	643 aa		10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	AXL	P30530	894 aa		10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	HNF4A	P41235	474 aa		10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	ABCG1	P45844	678 aa		10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	CUL2	Q13617	745 aa		10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	TRAPPC3L	Q5T215	181 aa		10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	MIS18BP1	Q6P0N0	1132 aa		10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	OLFM4	Q6UX06	510 aa		10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	STRA8	Q7Z7C7	330 aa		10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	FAM83A	Q86UY5	434 aa		10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	NKAIN4	Q8IVV8	208 aa		10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	ZNF654	Q8IZM8	581 aa		10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	ZNF845	Q96IR2	970 aa	Predicted RBP	10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	CHCHD6	Q9BRQ6	235 aa		10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	CCSER1	Q9C0I3	900 aa		10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	SH2B1	Q9NRF2	756 aa	Predicted RBP	10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	TRPM5	Q9NZQ8	1165 aa		10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	FNIP2	Q9P278	1114 aa		10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	AMACR	Q9UHK6	382 aa		10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	TELO2	Q9Y4R8	837 aa		10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	KTN1	Q86UP2	1357 aa	Known RBP	10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	LOC102724428	A0A0B4J2F2	783 aa		10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	CHURC1-FNTB	B4DL54	471 aa		10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	EYA2	O00167	538 aa		10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	ARHGAP33	O14559	1287 aa		10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	POLR2D	O15514	142 aa	Known RBP	10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	DKC1	O60832	514 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	POLR3D	P05423	398 aa	Predicted RBP	10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	IL32	P24001	234 aa		10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	STAT1	P42224	750 aa		10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	CLCN4	P51793	760 aa		10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	SIK1	P57059	783 aa		10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	ZNF280A	P59817	542 aa	Predicted RBP	10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	POLR2G	P62487	172 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	EIF4G2	P78344	907 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	TFAP4	Q01664	338 aa		10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	GSTM4	Q03013	218 aa		10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	RAB12	Q6IQ22	244 aa		10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	ANKRD35	Q8N283	1001 aa		10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	TRIM55	Q9BYV6	548 aa		10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	MIS18A	Q9NYP9	233 aa		10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	DPP7	Q9UHL4	492 aa		10.84	□□□□□ -0.67
MKRN3-204	ENST00000568945	ABHD14A-ACY1	A0A1B0GW23	586 aa		10.83	□□□□□ -0.68
MKRN3-204	ENST00000568945	CCDC162P	A2VCL2	907 aa		10.83	□□□□□ -0.68
MKRN3-204	ENST00000568945	MICAL2	O94851	1124 aa		10.83	□□□□□ -0.68
MKRN3-204	ENST00000568945	CAP1	Q01518	475 aa		10.83	□□□□□ -0.68
MKRN3-204	ENST00000568945	C5orf22	Q49AR2	442 aa		10.83	□□□□□ -0.68
MKRN3-204	ENST00000568945	TMEM132E	Q6IEE7	984 aa		10.83	□□□□□ -0.68
MKRN3-204	ENST00000568945	TTBK2	Q6IQ55	1244 aa		10.83	□□□□□ -0.68
MKRN3-204	ENST00000568945	NOSTRIN	Q8IVI9	506 aa		10.83	□□□□□ -0.68
MKRN3-204	ENST00000568945	CCDC33	Q8N5R6	958 aa		10.83	□□□□□ -0.68
MKRN3-204	ENST00000568945	CAMKK1	Q8N5S9	505 aa		10.83	□□□□□ -0.68
MKRN3-204	ENST00000568945	ZNF653	Q96CK0	615 aa		10.83	□□□□□ -0.68
MKRN3-204	ENST00000568945	CABS1	Q96KC9	395 aa		10.83	□□□□□ -0.68
MKRN3-204	ENST00000568945	RUNDC3B	Q96NL0	473 aa		10.83	□□□□□ -0.68
MKRN3-204	ENST00000568945	ASB2	Q96Q27	587 aa		10.83	□□□□□ -0.68
MKRN3-204	ENST00000568945	AIFM2	Q9BRQ8	373 aa		10.83	□□□□□ -0.68
MKRN3-204	ENST00000568945	WDR6	Q9NNW5	1121 aa	Known RBP	10.83	□□□□□ -0.68
MKRN3-204	ENST00000568945	GLRX2	Q9NS18	164 aa		10.83	□□□□□ -0.68
MKRN3-204	ENST00000568945	EHD3	Q9NZN3	535 aa		10.83	□□□□□ -0.68
MKRN3-204	ENST00000568945	BAG5	Q9UL15	447 aa		10.83	□□□□□ -0.68
MKRN3-204	ENST00000568945	TMCO1	Q9UM00	188 aa		10.83	□□□□□ -0.68
MKRN3-204	ENST00000568945	GPR52	Q9Y2T5	361 aa		10.83	□□□□□ -0.68
MKRN3-204	ENST00000568945	PCDHGB5	Q9Y5G0	923 aa		10.83	□□□□□ -0.68
MKRN3-204	ENST00000568945	TNFRSF10A	O00220	468 aa		10.83	□□□□□ -0.68
MKRN3-204	ENST00000568945	CTNND1	O60716	968 aa	Known RBP	10.83	□□□□□ -0.68
MKRN3-204	ENST00000568945	TSPAN9	O75954	239 aa		10.83	□□□□□ -0.68
MKRN3-204	ENST00000568945	ACTN1	P12814	892 aa		10.83	□□□□□ -0.68
MKRN3-204	ENST00000568945	TKTL1	P51854	596 aa		10.83	□□□□□ -0.68
MKRN3-204	ENST00000568945	OLR1	P78380	273 aa		10.83	□□□□□ -0.68
MKRN3-204	ENST00000568945	ITGB3BP	Q13352	177 aa	Predicted RBP	10.83	□□□□□ -0.68
MKRN3-204	ENST00000568945	CUL1	Q13616	776 aa		10.83	□□□□□ -0.68
MKRN3-204	ENST00000568945	MXD4	Q14582	209 aa	Predicted RBP	10.83	□□□□□ -0.68
MKRN3-204	ENST00000568945	ERCC6L	Q2NKX8	1250 aa		10.83	□□□□□ -0.68
MKRN3-204	ENST00000568945	KRTCAP3	Q53RY4	240 aa		10.83	□□□□□ -0.68
MKRN3-204	ENST00000568945	RETSAT	Q6NUM9	610 aa		10.83	□□□□□ -0.68
MKRN3-204	ENST00000568945	DENND1A	Q8TEH3	1009 aa		10.83	□□□□□ -0.68
MKRN3-204	ENST00000568945	VPS39	Q96JC1	886 aa		10.83	□□□□□ -0.68
MKRN3-204	ENST00000568945	MPHOSPH8	Q99549	860 aa		10.83	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms