RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 NEK8Q86SG6 692 aa21.27■■□□□ 1
SPSB3-210ENST00000568416 OXER1Q8TDS5 423 aa21.27■■□□□ 1
SPSB3-210ENST00000568416 CWH43Q9H720 699 aa21.27■■□□□ 1
SPSB3-210ENST00000568416 KCNMB3Q9NPA1 279 aa21.27■■□□□ 1
SPSB3-210ENST00000568416 AAASQ9NRG9 546 aa21.27■■□□□ 1
SPSB3-210ENST00000568416 RNF19AQ9NV58 838 aa21.27■■□□□ 1
SPSB3-210ENST00000568416 TYW1Q9NV66 732 aaKnown RBP21.27■■□□□ 1
SPSB3-210ENST00000568416 HCSTQ9UBK5 93 aa21.27■■□□□ 1
SPSB3-210ENST00000568416 EML1O00423 815 aa21.26■□□□□ 0.99
SPSB3-210ENST00000568416 LINC01565O15544 149 aa21.26■□□□□ 0.99
SPSB3-210ENST00000568416 TBX10O75333 385 aa21.26■□□□□ 0.99
SPSB3-210ENST00000568416 GCFC2P16383 781 aaKnown RBP21.26■□□□□ 0.99
SPSB3-210ENST00000568416 ZSCAN20P17040 1043 aaPredicted RBP21.26■□□□□ 0.99
SPSB3-210ENST00000568416 ADGRD2Q7Z7M1 963 aa21.26■□□□□ 0.99
SPSB3-210ENST00000568416 FAM20AQ96MK3 541 aa21.26■□□□□ 0.99
SPSB3-210ENST00000568416 IGFLR1Q9H665 355 aa21.26■□□□□ 0.99
SPSB3-210ENST00000568416 VAV3Q9UKW4 847 aa21.26■□□□□ 0.99
SPSB3-210ENST00000568416 FAM50BQ9Y247 325 aa21.26■□□□□ 0.99
SPSB3-210ENST00000568416 PCDHB12Q9Y5F1 795 aa21.26■□□□□ 0.99
SPSB3-210ENST00000568416 PI4K2BG5E9Z4 385 aa21.25■□□□□ 0.99
SPSB3-210ENST00000568416 PSMC5P62195 406 aa21.25■□□□□ 0.99
SPSB3-210ENST00000568416 UBE3AQ05086 875 aa21.25■□□□□ 0.99
SPSB3-210ENST00000568416 PPP2R5CQ13362 524 aa21.25■□□□□ 0.99
SPSB3-210ENST00000568416 SPOUT1Q5T280 376 aaKnown RBP21.25■□□□□ 0.99
SPSB3-210ENST00000568416 ECHDC2Q86YB7 292 aa21.25■□□□□ 0.99
SPSB3-210ENST00000568416 COLGALT1Q8NBJ5 622 aa21.25■□□□□ 0.99
SPSB3-210ENST00000568416 NLRP7Q8WX94 980 aa21.25■□□□□ 0.99
SPSB3-210ENST00000568416 PPP2R3CQ969Q6 453 aa21.25■□□□□ 0.99
SPSB3-210ENST00000568416 CASD1Q96PB1 797 aa21.25■□□□□ 0.99
SPSB3-210ENST00000568416 SH2D3AQ9BRG2 576 aa21.25■□□□□ 0.99
SPSB3-210ENST00000568416 TMEM117Q9H0C3 514 aa21.25■□□□□ 0.99
SPSB3-210ENST00000568416 ORC3Q9UBD5 711 aaPredicted RBP21.25■□□□□ 0.99
SPSB3-210ENST00000568416 PRKAG3Q9UGI9 489 aa21.25■□□□□ 0.99
SPSB3-210ENST00000568416 MYH9P35579 1960 aaKnown RBP21.25■□□□□ 0.99
SPSB3-210ENST00000568416 DDX11L8A8MPP1 907 aa21.24■□□□□ 0.99
SPSB3-210ENST00000568416 HOXA2O43364 376 aa21.24■□□□□ 0.99
SPSB3-210ENST00000568416 MAFO75444 373 aaPredicted RBP21.24■□□□□ 0.99
SPSB3-210ENST00000568416 FDPSP14324 419 aaKnown RBP21.24■□□□□ 0.99
SPSB3-210ENST00000568416 FGFR4P22455 802 aa21.24■□□□□ 0.99
SPSB3-210ENST00000568416 CDC42EP1Q00587 391 aa21.24■□□□□ 0.99
SPSB3-210ENST00000568416 EARS2Q5JPH6 523 aaKnown RBP21.24■□□□□ 0.99
SPSB3-210ENST00000568416 PIK3AP1Q6ZUJ8 805 aa21.24■□□□□ 0.99
SPSB3-210ENST00000568416 ANO5Q75V66 913 aa21.24■□□□□ 0.99
SPSB3-210ENST00000568416 WASF1Q92558 559 aa21.24■□□□□ 0.99
SPSB3-210ENST00000568416 SCLT1Q96NL6 688 aa21.24■□□□□ 0.99
SPSB3-210ENST00000568416 NAP1L4Q99733 375 aaKnown RBP21.24■□□□□ 0.99
SPSB3-210ENST00000568416 RAPGEFL1Q9UHV5 662 aa21.24■□□□□ 0.99
SPSB3-210ENST00000568416 EVPLQ92817 2033 aa21.24■□□□□ 0.99
SPSB3-210ENST00000568416 TBX3O15119 743 aa21.23■□□□□ 0.99
SPSB3-210ENST00000568416 MBTPS2O43462 519 aa21.23■□□□□ 0.99
SPSB3-210ENST00000568416 FGF18O76093 207 aa21.23■□□□□ 0.99
SPSB3-210ENST00000568416 LARGE1O95461 756 aa21.23■□□□□ 0.99
SPSB3-210ENST00000568416 LAG3P18627 525 aa21.23■□□□□ 0.99
SPSB3-210ENST00000568416 SSTR3P32745 418 aaPredicted RBP21.23■□□□□ 0.99
SPSB3-210ENST00000568416 ZP2Q05996 745 aa21.23■□□□□ 0.99
SPSB3-210ENST00000568416 SMAD2Q15796 467 aaKnown RBP21.23■□□□□ 0.99
SPSB3-210ENST00000568416 CLUL1Q15846 466 aa21.23■□□□□ 0.99
SPSB3-210ENST00000568416 ME3Q16798 604 aa21.23■□□□□ 0.99
SPSB3-210ENST00000568416 CSPP1Q1MSJ5 1256 aa21.23■□□□□ 0.99
SPSB3-210ENST00000568416 LRRC55Q6ZSA7 311 aa21.23■□□□□ 0.99
SPSB3-210ENST00000568416 EFHBQ8N7U6 833 aa21.23■□□□□ 0.99
SPSB3-210ENST00000568416 HAS1Q92839 578 aa21.23■□□□□ 0.99
SPSB3-210ENST00000568416 LRFN3Q9BTN0 628 aa21.23■□□□□ 0.99
SPSB3-210ENST00000568416 GCOM2Q9BZD3 368 aaPredicted RBP21.23■□□□□ 0.99
SPSB3-210ENST00000568416 C11orf16Q9NQ32 467 aa21.23■□□□□ 0.99
SPSB3-210ENST00000568416 PCDHGC5Q9Y5F6 944 aa21.23■□□□□ 0.99
SPSB3-210ENST00000568416 FNDC1Q4ZHG4 1894 aaPredicted RBP21.22■□□□□ 0.99
SPSB3-210ENST00000568416 A0A087WZ62 844 aa21.22■□□□□ 0.99
SPSB3-210ENST00000568416 A0A0U1RQF3 1178 aa21.22■□□□□ 0.99
SPSB3-210ENST00000568416 C19orf67A6NJJ6 358 aa21.22■□□□□ 0.99
SPSB3-210ENST00000568416 CCNT1O60563 726 aaKnown RBP21.22■□□□□ 0.99
SPSB3-210ENST00000568416 QARSP47897 775 aaKnown RBP21.22■□□□□ 0.99
SPSB3-210ENST00000568416 NRIP1P48552 1158 aa21.22■□□□□ 0.99
SPSB3-210ENST00000568416 DNM2P50570 870 aa21.22■□□□□ 0.99
SPSB3-210ENST00000568416 PLA2G4FQ68DD2 849 aa21.22■□□□□ 0.99
SPSB3-210ENST00000568416 ZNF598Q86UK7 904 aaKnown RBP21.22■□□□□ 0.99
SPSB3-210ENST00000568416 ZNF410Q86VK4 478 aa21.22■□□□□ 0.99
SPSB3-210ENST00000568416 THNSL1Q8IYQ7 743 aa21.22■□□□□ 0.99
SPSB3-210ENST00000568416 NECAB1Q8N987 351 aa21.22■□□□□ 0.99
SPSB3-210ENST00000568416 TNFRSF25Q93038 417 aa21.22■□□□□ 0.99
SPSB3-210ENST00000568416 GTF3C6Q969F1 213 aa21.22■□□□□ 0.99
SPSB3-210ENST00000568416 MSLNLQ96KJ4 702 aa21.22■□□□□ 0.99
SPSB3-210ENST00000568416 FDXACB1Q9BRP7 624 aaPredicted RBP21.22■□□□□ 0.99
SPSB3-210ENST00000568416 TLR9Q9NR96 1032 aa21.22■□□□□ 0.99
SPSB3-210ENST00000568416 SUCLA2Q9P2R7 463 aaPredicted RBP21.22■□□□□ 0.99
SPSB3-210ENST00000568416 WRAP73Q9P2S5 460 aaPredicted RBP21.22■□□□□ 0.99
SPSB3-210ENST00000568416 CD207Q9UJ71 328 aa21.22■□□□□ 0.99
SPSB3-210ENST00000568416 WDR81Q562E7 1941 aa21.21■□□□□ 0.99
SPSB3-210ENST00000568416 FAM205CA6NFA0 338 aa21.21■□□□□ 0.99
SPSB3-210ENST00000568416 DKC1O60832 514 aaKnown RBP eCLIP21.21■□□□□ 0.99
SPSB3-210ENST00000568416 GPR37L1O60883 481 aa21.21■□□□□ 0.99
SPSB3-210ENST00000568416 CSDE1O75534 798 aaKnown RBP21.21■□□□□ 0.99
SPSB3-210ENST00000568416 ATF7P17544 494 aaPredicted RBP21.21■□□□□ 0.99
SPSB3-210ENST00000568416 NDUFV1P49821 464 aa21.21■□□□□ 0.99
SPSB3-210ENST00000568416 SMAD4Q13485 552 aaKnown RBP21.21■□□□□ 0.99
SPSB3-210ENST00000568416 TMEM31Q5JXX7 168 aa21.21■□□□□ 0.99
SPSB3-210ENST00000568416 CLLU1OSQ5K130 101 aa21.21■□□□□ 0.99
SPSB3-210ENST00000568416 POTEDQ86YR6 584 aa21.21■□□□□ 0.99
SPSB3-210ENST00000568416 ADHFE1Q8IWW8 467 aa21.21■□□□□ 0.99
SPSB3-210ENST00000568416 LRRC43Q8N309 656 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms