RNA–Protein interactions for RNA: ENST00000567880.5

TCF4-236, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-236ENST00000567880 HSD3B7Q9H2F3 369 aa11.53□□□□□ -0.56
TCF4-236ENST00000567880 RNPEPQ9H4A4 650 aa11.53□□□□□ -0.56
TCF4-236ENST00000567880 OLFML3Q9NRN5 406 aa11.53□□□□□ -0.56
TCF4-236ENST00000567880 SAMSN1Q9NSI8 373 aaKnown RBP11.53□□□□□ -0.56
TCF4-236ENST00000567880 LARSQ9P2J5 1176 aaKnown RBP11.53□□□□□ -0.56
TCF4-236ENST00000567880 SEL1LQ9UBV2 794 aa11.53□□□□□ -0.56
TCF4-236ENST00000567880 BICDL2A1A5D9 508 aa11.52□□□□□ -0.56
TCF4-236ENST00000567880 K7ENM7 598 aa11.52□□□□□ -0.56
TCF4-236ENST00000567880 ADCY3O60266 1144 aa11.52□□□□□ -0.56
TCF4-236ENST00000567880 PRPF6O94906 941 aaKnown RBP11.52□□□□□ -0.56
TCF4-236ENST00000567880 CCNE1P24864 410 aa11.52□□□□□ -0.56
TCF4-236ENST00000567880 PEX3P56589 373 aa11.52□□□□□ -0.56
TCF4-236ENST00000567880 BEX3Q00994 111 aa11.52□□□□□ -0.56
TCF4-236ENST00000567880 MAP2K1Q02750 393 aaPredicted RBP11.52□□□□□ -0.56
TCF4-236ENST00000567880 CACNB2Q08289 660 aaPredicted RBP11.52□□□□□ -0.56
TCF4-236ENST00000567880 TBC1D8BQ0IIM8 1120 aa11.52□□□□□ -0.56
TCF4-236ENST00000567880 ZC2HC1CQ53FD0 456 aaPredicted RBP11.52□□□□□ -0.56
TCF4-236ENST00000567880 COBLL1Q53SF7 1204 aa11.52□□□□□ -0.56
TCF4-236ENST00000567880 ANKRD40Q6AI12 368 aa11.52□□□□□ -0.56
TCF4-236ENST00000567880 CREBRFQ8IUR6 639 aa11.52□□□□□ -0.56
TCF4-236ENST00000567880 MCPH1Q8NEM0 835 aa11.52□□□□□ -0.56
TCF4-236ENST00000567880 SCFD1Q8WVM8 642 aa11.52□□□□□ -0.56
TCF4-236ENST00000567880 EEF2KMTQ96G04 330 aa11.52□□□□□ -0.56
TCF4-236ENST00000567880 C16orf70Q9BSU1 422 aa11.52□□□□□ -0.56
TCF4-236ENST00000567880 TRIM5Q9C035 493 aa11.52□□□□□ -0.56
TCF4-236ENST00000567880 XPNPEP1Q9NQW7 623 aa11.52□□□□□ -0.56
TCF4-236ENST00000567880 ZNF215Q9UL58 517 aaPredicted RBP11.52□□□□□ -0.56
TCF4-236ENST00000567880 H3BRB1 525 aa11.52□□□□□ -0.57
TCF4-236ENST00000567880 ADCY5O95622 1261 aa11.52□□□□□ -0.57
TCF4-236ENST00000567880 PLS3P13797 630 aa11.52□□□□□ -0.57
TCF4-236ENST00000567880 PRKAR2AP13861 404 aaKnown RBP11.52□□□□□ -0.57
TCF4-236ENST00000567880 C1QTNF8P60827 252 aa11.52□□□□□ -0.57
TCF4-236ENST00000567880 IGBP1P78318 339 aa11.52□□□□□ -0.57
TCF4-236ENST00000567880 TARBP2Q15633 366 aaKnown RBP11.52□□□□□ -0.57
TCF4-236ENST00000567880 KSR1Q8IVT5 923 aa11.52□□□□□ -0.57
TCF4-236ENST00000567880 TRAPPC12Q8WVT3 735 aa11.52□□□□□ -0.57
TCF4-236ENST00000567880 KIFAP3Q92845 792 aa11.52□□□□□ -0.57
TCF4-236ENST00000567880 TMEM143Q96AN5 459 aa11.52□□□□□ -0.57
TCF4-236ENST00000567880 POLR3FQ9H1D9 316 aaPredicted RBP11.52□□□□□ -0.57
TCF4-236ENST00000567880 SEMA6BQ9H3T3 888 aa11.52□□□□□ -0.57
TCF4-236ENST00000567880 TUT1Q9H6E5 874 aaKnown RBP11.52□□□□□ -0.57
TCF4-236ENST00000567880 DHX33Q9H6R0 707 aaKnown RBP11.52□□□□□ -0.57
TCF4-236ENST00000567880 KIAA1522Q9P206 1035 aaPredicted RBP11.52□□□□□ -0.57
TCF4-236ENST00000567880 CCDC169A6NNP5 214 aa11.51□□□□□ -0.57
TCF4-236ENST00000567880 HBP1O60381 514 aa11.51□□□□□ -0.57
TCF4-236ENST00000567880 PPP1R37O75864 691 aa11.51□□□□□ -0.57
TCF4-236ENST00000567880 KIF20AO95235 890 aa11.51□□□□□ -0.57
TCF4-236ENST00000567880 GNRH1P01148 92 aa11.51□□□□□ -0.57
TCF4-236ENST00000567880 CCND3P30281 292 aaPredicted RBP11.51□□□□□ -0.57
TCF4-236ENST00000567880 RFC5P40937 340 aa11.51□□□□□ -0.57
TCF4-236ENST00000567880 CPT1AP50416 773 aa11.51□□□□□ -0.57
TCF4-236ENST00000567880 DMP1Q13316 513 aaPredicted RBP11.51□□□□□ -0.57
TCF4-236ENST00000567880 BRDTQ58F21 947 aaPredicted RBP11.51□□□□□ -0.57
TCF4-236ENST00000567880 CENPPQ6IPU0 288 aa11.51□□□□□ -0.57
TCF4-236ENST00000567880 TTI2Q6NXR4 508 aa11.51□□□□□ -0.57
TCF4-236ENST00000567880 CSGALNACT2Q8N6G5 542 aa11.51□□□□□ -0.57
TCF4-236ENST00000567880 ZBTB10Q96DT7 871 aa11.51□□□□□ -0.57
TCF4-236ENST00000567880 FIZ1Q96SL8 496 aa11.51□□□□□ -0.57
TCF4-236ENST00000567880 CEP89Q96ST8 783 aa11.51□□□□□ -0.57
TCF4-236ENST00000567880 SUGCTQ9HAC7 445 aa11.51□□□□□ -0.57
TCF4-236ENST00000567880 PDLIM7Q9NR12 457 aa11.51□□□□□ -0.57
TCF4-236ENST00000567880 NRBP1Q9UHY1 535 aa11.51□□□□□ -0.57
TCF4-236ENST00000567880 ZBTB42B2RXF5 422 aa11.5□□□□□ -0.57
TCF4-236ENST00000567880 SLC16A4O15374 487 aa11.5□□□□□ -0.57
TCF4-236ENST00000567880 SERPINC1P01008 464 aa11.5□□□□□ -0.57
TCF4-236ENST00000567880 HMGCRP04035 888 aa11.5□□□□□ -0.57
TCF4-236ENST00000567880 MYL3P08590 195 aa11.5□□□□□ -0.57
TCF4-236ENST00000567880 C6orf222P0C671 652 aaPredicted RBP11.5□□□□□ -0.57
TCF4-236ENST00000567880 ARHGEF6Q15052 776 aa11.5□□□□□ -0.57
TCF4-236ENST00000567880 STXBP4Q6ZWJ1 553 aa11.5□□□□□ -0.57
TCF4-236ENST00000567880 EPM2AIP1Q7L775 607 aaPredicted RBP11.5□□□□□ -0.57
TCF4-236ENST00000567880 ZNF720Q7Z2F6 126 aa11.5□□□□□ -0.57
TCF4-236ENST00000567880 PPP1R13LQ8WUF5 828 aa11.5□□□□□ -0.57
TCF4-236ENST00000567880 BSNDQ8WZ55 320 aa11.5□□□□□ -0.57
TCF4-236ENST00000567880 PCMTD1Q96MG8 357 aaPredicted RBP11.5□□□□□ -0.57
TCF4-236ENST00000567880 TSG101Q99816 390 aa11.5□□□□□ -0.57
TCF4-236ENST00000567880 DUSP9Q99956 384 aaKnown RBP11.5□□□□□ -0.57
TCF4-236ENST00000567880 KIFC3Q9BVG8 833 aa11.5□□□□□ -0.57
TCF4-236ENST00000567880 SRRTQ9BXP5 876 aaKnown RBP11.5□□□□□ -0.57
TCF4-236ENST00000567880 Q9Y3F1 56 aa11.5□□□□□ -0.57
TCF4-236ENST00000567880 TRIM17Q9Y577 477 aa11.5□□□□□ -0.57
TCF4-236ENST00000567880 EIF3DO15371 548 aaKnown RBP eCLIP11.5□□□□□ -0.57
TCF4-236ENST00000567880 SEPT4O43236 478 aa11.5□□□□□ -0.57
TCF4-236ENST00000567880 DUSP11O75319 330 aaKnown RBP11.5□□□□□ -0.57
TCF4-236ENST00000567880 PGK1P00558 417 aa11.5□□□□□ -0.57
TCF4-236ENST00000567880 RARBP10826 455 aa11.5□□□□□ -0.57
TCF4-236ENST00000567880 HOXD8P13378 290 aaPredicted RBP11.5□□□□□ -0.57
TCF4-236ENST00000567880 INSRRP14616 1297 aa11.5□□□□□ -0.57
TCF4-236ENST00000567880 SMTNP53814 917 aa11.5□□□□□ -0.57
TCF4-236ENST00000567880 FSCN1Q16658 493 aaKnown RBP11.5□□□□□ -0.57
TCF4-236ENST00000567880 KNOP1Q1ED39 458 aaKnown RBP11.5□□□□□ -0.57
TCF4-236ENST00000567880 SND1Q7KZF4 910 aaKnown RBP eCLIP11.5□□□□□ -0.57
TCF4-236ENST00000567880 LRRC71Q8N4P6 559 aa11.5□□□□□ -0.57
TCF4-236ENST00000567880 IFT74Q96LB3 600 aa11.5□□□□□ -0.57
TCF4-236ENST00000567880 IKZF4Q9H2S9 585 aa11.5□□□□□ -0.57
TCF4-236ENST00000567880 KMT5AQ9NQR1 393 aa11.5□□□□□ -0.57
TCF4-236ENST00000567880 IFNKQ9P0W0 207 aa11.5□□□□□ -0.57
TCF4-236ENST00000567880 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.5□□□□□ -0.57
TCF4-236ENST00000567880 FRMPD3Q5JV73 1810 aa11.49□□□□□ -0.57
TCF4-236ENST00000567880 MYADML2A6NDP7 307 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms