RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 TMEM47Q9BQJ4 181 aa11.19□□□□□ -0.62
CAPN3-216ENST00000567071 EMILIN2Q9BXX0 1053 aa11.19□□□□□ -0.62
CAPN3-216ENST00000567071 CELF4Q9BZC1 486 aaKnown RBP11.19□□□□□ -0.62
CAPN3-216ENST00000567071 ELAC1Q9H777 363 aaKnown RBP11.19□□□□□ -0.62
CAPN3-216ENST00000567071 WDR6Q9NNW5 1121 aaKnown RBP11.19□□□□□ -0.62
CAPN3-216ENST00000567071 LTB4R2Q9NPC1 389 aa11.19□□□□□ -0.62
CAPN3-216ENST00000567071 ERAP1Q9NZ08 941 aa11.19□□□□□ -0.62
CAPN3-216ENST00000567071 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.19□□□□□ -0.62
CAPN3-216ENST00000567071 FARP1Q9Y4F1 1045 aaPredicted RBP11.19□□□□□ -0.62
CAPN3-216ENST00000567071 IRAK3Q9Y616 596 aa11.19□□□□□ -0.62
CAPN3-216ENST00000567071 DOCK5Q9H7D0 1870 aa11.19□□□□□ -0.62
CAPN3-216ENST00000567071 C9IYK1 514 aa11.18□□□□□ -0.62
CAPN3-216ENST00000567071 KLRC2P26717 231 aa11.18□□□□□ -0.62
CAPN3-216ENST00000567071 MARK3P27448 753 aa11.18□□□□□ -0.62
CAPN3-216ENST00000567071 RPS9P46781 194 aaKnown RBP11.18□□□□□ -0.62
CAPN3-216ENST00000567071 POLGP54098 1239 aaPredicted RBP11.18□□□□□ -0.62
CAPN3-216ENST00000567071 KRT76Q01546 638 aa11.18□□□□□ -0.62
CAPN3-216ENST00000567071 PFKPQ01813 784 aa11.18□□□□□ -0.62
CAPN3-216ENST00000567071 BBXQ8WY36 941 aaPredicted RBP11.18□□□□□ -0.62
CAPN3-216ENST00000567071 OSBP2Q969R2 916 aa11.18□□□□□ -0.62
CAPN3-216ENST00000567071 MYADMQ96S97 322 aa11.18□□□□□ -0.62
CAPN3-216ENST00000567071 DDX23Q9BUQ8 820 aaKnown RBP11.18□□□□□ -0.62
CAPN3-216ENST00000567071 ZBP1Q9H171 429 aa11.18□□□□□ -0.62
CAPN3-216ENST00000567071 TOMM22Q9NS69 142 aa11.18□□□□□ -0.62
CAPN3-216ENST00000567071 MAP3K20Q9NYL2 800 aaKnown RBP11.18□□□□□ -0.62
CAPN3-216ENST00000567071 MRPS17Q9Y2R5 130 aaKnown RBP11.18□□□□□ -0.62
CAPN3-216ENST00000567071 SMG1Q96Q15 3661 aaKnown RBP11.17□□□□□ -0.62
CAPN3-216ENST00000567071 GREB1Q4ZG55 1949 aa11.17□□□□□ -0.62
CAPN3-216ENST00000567071 KDM3AQ9Y4C1 1321 aa11.17□□□□□ -0.62
CAPN3-216ENST00000567071 AKAP13Q12802 2813 aa11.17□□□□□ -0.62
CAPN3-216ENST00000567071 TM4SF5O14894 197 aa11.17□□□□□ -0.62
CAPN3-216ENST00000567071 GPR182O15218 404 aa11.17□□□□□ -0.62
CAPN3-216ENST00000567071 DHX16O60231 1041 aaKnown RBP11.17□□□□□ -0.62
CAPN3-216ENST00000567071 MGEA5O60502 916 aa11.17□□□□□ -0.62
CAPN3-216ENST00000567071 ZFYP08048 801 aaPredicted RBP11.17□□□□□ -0.62
CAPN3-216ENST00000567071 CTSAP10619 480 aa11.17□□□□□ -0.62
CAPN3-216ENST00000567071 NOVP48745 357 aa11.17□□□□□ -0.62
CAPN3-216ENST00000567071 METAP2P50579 478 aaKnown RBP eCLIP11.17□□□□□ -0.62
CAPN3-216ENST00000567071 HSD17B4P51659 736 aa11.17□□□□□ -0.62
CAPN3-216ENST00000567071 SLC44A4Q53GD3 710 aa11.17□□□□□ -0.62
CAPN3-216ENST00000567071 STPG1Q5TH74 334 aa11.17□□□□□ -0.62
CAPN3-216ENST00000567071 CMASQ8NFW8 434 aaPredicted RBP11.17□□□□□ -0.62
CAPN3-216ENST00000567071 AUTS2Q8WXX7 1259 aa11.17□□□□□ -0.62
CAPN3-216ENST00000567071 GPKOWQ92917 476 aaPredicted RBP eCLIP11.17□□□□□ -0.62
CAPN3-216ENST00000567071 MAP4K1Q92918 833 aa11.17□□□□□ -0.62
CAPN3-216ENST00000567071 CASD1Q96PB1 797 aa11.17□□□□□ -0.62
CAPN3-216ENST00000567071 RXFP3Q9NSD7 469 aa11.17□□□□□ -0.62
CAPN3-216ENST00000567071 GINS2Q9Y248 185 aa11.17□□□□□ -0.62
CAPN3-216ENST00000567071 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.17□□□□□ -0.62
CAPN3-216ENST00000567071 NUMBLQ9Y6R0 609 aa11.17□□□□□ -0.62
CAPN3-216ENST00000567071 ADAMTS20P59510 1910 aa11.17□□□□□ -0.62
CAPN3-216ENST00000567071 MYH15Q9Y2K3 1946 aa11.17□□□□□ -0.62
CAPN3-216ENST00000567071 MYO18BQ8IUG5 2567 aa11.16□□□□□ -0.62
CAPN3-216ENST00000567071 FIBPO43427 364 aa11.16□□□□□ -0.62
CAPN3-216ENST00000567071 STAM2O75886 525 aa11.16□□□□□ -0.62
CAPN3-216ENST00000567071 LAMP2P13473 410 aa11.16□□□□□ -0.62
CAPN3-216ENST00000567071 TCF7P36402 384 aaPredicted RBP11.16□□□□□ -0.62
CAPN3-216ENST00000567071 NOVA1P51513 510 aaKnown RBP11.16□□□□□ -0.62
CAPN3-216ENST00000567071 GPC5P78333 572 aa11.16□□□□□ -0.62
CAPN3-216ENST00000567071 ZNF252P-AS1Q0IIN9 211 aa11.16□□□□□ -0.62
CAPN3-216ENST00000567071 HTR4Q13639 388 aa11.16□□□□□ -0.62
CAPN3-216ENST00000567071 LRRC55Q6ZSA7 311 aa11.16□□□□□ -0.62
CAPN3-216ENST00000567071 STOX1Q6ZVD7 989 aa11.16□□□□□ -0.62
CAPN3-216ENST00000567071 PDZD3Q86UT5 571 aa11.16□□□□□ -0.62
CAPN3-216ENST00000567071 SKAP1Q86WV1 359 aa11.16□□□□□ -0.62
CAPN3-216ENST00000567071 SMC5Q8IY18 1101 aa11.16□□□□□ -0.62
CAPN3-216ENST00000567071 NME8Q8N427 588 aa11.16□□□□□ -0.62
CAPN3-216ENST00000567071 SAMD3Q8N6K7 520 aa11.16□□□□□ -0.62
CAPN3-216ENST00000567071 GIMAP8Q8ND71 665 aaPredicted RBP11.16□□□□□ -0.62
CAPN3-216ENST00000567071 GATA6Q92908 595 aa11.16□□□□□ -0.62
CAPN3-216ENST00000567071 PHKBQ93100 1093 aa11.16□□□□□ -0.62
CAPN3-216ENST00000567071 CLDN23Q96B33 292 aa11.16□□□□□ -0.62
CAPN3-216ENST00000567071 LSM14BQ9BX40 385 aaKnown RBP11.16□□□□□ -0.62
CAPN3-216ENST00000567071 MRPL9Q9BYD2 267 aaKnown RBP11.16□□□□□ -0.62
CAPN3-216ENST00000567071 UBA5Q9GZZ9 404 aa11.16□□□□□ -0.62
CAPN3-216ENST00000567071 PIDD1Q9HB75 910 aa11.16□□□□□ -0.62
CAPN3-216ENST00000567071 STK39Q9UEW8 545 aa11.16□□□□□ -0.62
CAPN3-216ENST00000567071 MTF2Q9Y483 593 aaPredicted RBP11.16□□□□□ -0.62
CAPN3-216ENST00000567071 LAMA4Q16363 1823 aa11.15□□□□□ -0.62
CAPN3-216ENST00000567071 CCDC195A0A1B0GUA6 201 aa11.15□□□□□ -0.62
CAPN3-216ENST00000567071 NT5C1B-RDH14C9J2C7 533 aa11.15□□□□□ -0.62
CAPN3-216ENST00000567071 ANHXE9PGG2 379 aa11.15□□□□□ -0.62
CAPN3-216ENST00000567071 RNF113AO15541 343 aaKnown RBP11.15□□□□□ -0.62
CAPN3-216ENST00000567071 SPINK2P20155 84 aa11.15□□□□□ -0.62
CAPN3-216ENST00000567071 CNR2P34972 360 aa11.15□□□□□ -0.62
CAPN3-216ENST00000567071 CLCN4P51793 760 aa11.15□□□□□ -0.62
CAPN3-216ENST00000567071 BCAR1P56945 870 aa11.15□□□□□ -0.62
CAPN3-216ENST00000567071 CTDSPL2Q05D32 466 aa11.15□□□□□ -0.62
CAPN3-216ENST00000567071 MARCH8Q5T0T0 291 aa11.15□□□□□ -0.62
CAPN3-216ENST00000567071 CEP68Q76N32 757 aa11.15□□□□□ -0.62
CAPN3-216ENST00000567071 GET4Q7L5D6 327 aaPredicted RBP11.15□□□□□ -0.62
CAPN3-216ENST00000567071 IL31RAQ8NI17 732 aa11.15□□□□□ -0.62
CAPN3-216ENST00000567071 FEZF2Q8TBJ5 459 aa11.15□□□□□ -0.62
CAPN3-216ENST00000567071 SMG7Q92540 1137 aaKnown RBP11.15□□□□□ -0.62
CAPN3-216ENST00000567071 ZFP91Q96JP5 570 aaPredicted RBP11.15□□□□□ -0.62
CAPN3-216ENST00000567071 IER2Q9BTL4 223 aa11.15□□□□□ -0.62
CAPN3-216ENST00000567071 TMEM121BQ9BXQ6 578 aaPredicted RBP11.15□□□□□ -0.62
CAPN3-216ENST00000567071 RHOBTB2Q9BYZ6 727 aa11.15□□□□□ -0.62
CAPN3-216ENST00000567071 SMARCAD1Q9H4L7 1026 aa11.15□□□□□ -0.62
CAPN3-216ENST00000567071 BCAS3Q9H6U6 928 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms