RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 XKR9Q5GH70 373 aa18.61■□□□□ 0.57
CLN6-208ENST00000567060 MARCH8Q5T0T0 291 aa18.61■□□□□ 0.57
CLN6-208ENST00000567060 POTEGQ6S5H5 508 aa18.61■□□□□ 0.57
CLN6-208ENST00000567060 CCDC73Q6ZRK6 1079 aa18.61■□□□□ 0.57
CLN6-208ENST00000567060 RASSF8Q8NHQ8 419 aa18.61■□□□□ 0.57
CLN6-208ENST00000567060 SCLYQ96I15 445 aa18.61■□□□□ 0.57
CLN6-208ENST00000567060 CEP89Q96ST8 783 aa18.61■□□□□ 0.57
CLN6-208ENST00000567060 DHX33Q9H6R0 707 aaKnown RBP18.61■□□□□ 0.57
CLN6-208ENST00000567060 DDX19AQ9NUU7 478 aaKnown RBP18.61■□□□□ 0.57
CLN6-208ENST00000567060 KCND2Q9NZV8 630 aa18.61■□□□□ 0.57
CLN6-208ENST00000567060 PCDHA11Q9Y5I1 949 aa18.61■□□□□ 0.57
CLN6-208ENST00000567060 SLC4A7Q9Y6M7 1214 aa18.61■□□□□ 0.57
CLN6-208ENST00000567060 PRRC2BQ5JSZ5 2229 aaKnown RBP18.61■□□□□ 0.57
CLN6-208ENST00000567060 IGKV6-21A0A0C4DH24 114 aa18.6■□□□□ 0.57
CLN6-208ENST00000567060 PP2D1A8MPX8 630 aa18.6■□□□□ 0.57
CLN6-208ENST00000567060 RFXAPO00287 272 aa18.6■□□□□ 0.57
CLN6-208ENST00000567060 TREHO43280 583 aa18.6■□□□□ 0.57
CLN6-208ENST00000567060 MAFO75444 373 aaPredicted RBP18.6■□□□□ 0.57
CLN6-208ENST00000567060 C22orf31O95567 290 aa18.6■□□□□ 0.57
CLN6-208ENST00000567060 CMA1P23946 247 aa18.6■□□□□ 0.57
CLN6-208ENST00000567060 CDC25AP30304 524 aa18.6■□□□□ 0.57
CLN6-208ENST00000567060 DNM2P50570 870 aa18.6■□□□□ 0.57
CLN6-208ENST00000567060 MTERF2Q49AM1 385 aa18.6■□□□□ 0.57
CLN6-208ENST00000567060 PPP2R2DQ66LE6 453 aa18.6■□□□□ 0.57
CLN6-208ENST00000567060 CLIC6Q96NY7 704 aa18.6■□□□□ 0.57
CLN6-208ENST00000567060 CTAGE1Q96RT6 745 aa18.6■□□□□ 0.57
CLN6-208ENST00000567060 TIPINQ9BVW5 301 aa18.6■□□□□ 0.57
CLN6-208ENST00000567060 CUEDC2Q9H467 287 aa18.6■□□□□ 0.57
CLN6-208ENST00000567060 ARID2Q68CP9 1835 aa18.59■□□□□ 0.57
CLN6-208ENST00000567060 CYP2C9P11712 490 aa18.59■□□□□ 0.57
CLN6-208ENST00000567060 POU3F3P20264 500 aaPredicted RBP18.59■□□□□ 0.57
CLN6-208ENST00000567060 KCNQ1P51787 676 aa18.59■□□□□ 0.57
CLN6-208ENST00000567060 POLGP54098 1239 aaPredicted RBP18.59■□□□□ 0.57
CLN6-208ENST00000567060 IGBP1P78318 339 aa18.59■□□□□ 0.57
CLN6-208ENST00000567060 GRB10Q13322 594 aa18.59■□□□□ 0.57
CLN6-208ENST00000567060 RESP18Q5W5W9 173 aa18.59■□□□□ 0.57
CLN6-208ENST00000567060 RPUSD2Q8IZ73 545 aaKnown RBP18.59■□□□□ 0.57
CLN6-208ENST00000567060 MICALL1Q8N3F8 863 aa18.59■□□□□ 0.57
CLN6-208ENST00000567060 TMEM87AQ8NBN3 555 aa18.59■□□□□ 0.57
CLN6-208ENST00000567060 MCPH1Q8NEM0 835 aa18.59■□□□□ 0.57
CLN6-208ENST00000567060 TCP11Q8WWU5 503 aa18.59■□□□□ 0.57
CLN6-208ENST00000567060 FAM122AQ96E09 287 aa18.59■□□□□ 0.57
CLN6-208ENST00000567060 EPSTI1Q96J88 318 aa18.59■□□□□ 0.57
CLN6-208ENST00000567060 PNMA5Q96PV4 448 aa18.59■□□□□ 0.57
CLN6-208ENST00000567060 MAP7D2Q96T17 732 aa18.59■□□□□ 0.57
CLN6-208ENST00000567060 ARHGEF35A5YM69 484 aa18.58■□□□□ 0.56
CLN6-208ENST00000567060 ATP2A2P16615 1042 aaKnown RBP18.58■□□□□ 0.56
CLN6-208ENST00000567060 HIC1Q14526 733 aa18.58■□□□□ 0.56
CLN6-208ENST00000567060 ECM1Q16610 540 aa18.58■□□□□ 0.56
CLN6-208ENST00000567060 SHC4Q6S5L8 630 aa18.58■□□□□ 0.56
CLN6-208ENST00000567060 LINC01465Q8N7H1 131 aa18.58■□□□□ 0.56
CLN6-208ENST00000567060 PIGOQ8TEQ8 1089 aa18.58■□□□□ 0.56
CLN6-208ENST00000567060 TSPYL2Q9H2G4 693 aaPredicted RBP18.58■□□□□ 0.56
CLN6-208ENST00000567060 MAGEF1Q9HAY2 307 aa18.58■□□□□ 0.56
CLN6-208ENST00000567060 ATP6V0A4Q9HBG4 840 aa18.58■□□□□ 0.56
CLN6-208ENST00000567060 USP25Q9UHP3 1055 aa18.58■□□□□ 0.56
CLN6-208ENST00000567060 MTCH2Q9Y6C9 303 aa18.58■□□□□ 0.56
CLN6-208ENST00000567060 FAM237AA0A1B0GTK4 181 aa18.57■□□□□ 0.56
CLN6-208ENST00000567060 GOLGA6L4A6NEF3 574 aa18.57■□□□□ 0.56
CLN6-208ENST00000567060 EPOPA6NHQ4 379 aa18.57■□□□□ 0.56
CLN6-208ENST00000567060 M0QZ92 97 aa18.57■□□□□ 0.56
CLN6-208ENST00000567060 ASAP2O43150 1006 aa18.57■□□□□ 0.56
CLN6-208ENST00000567060 PLCG1P19174 1290 aa18.57■□□□□ 0.56
CLN6-208ENST00000567060 RFC2P35250 354 aa18.57■□□□□ 0.56
CLN6-208ENST00000567060 ZNF200P98182 395 aaPredicted RBP18.57■□□□□ 0.56
CLN6-208ENST00000567060 KARSQ15046 597 aaKnown RBP18.57■□□□□ 0.56
CLN6-208ENST00000567060 TRIM71Q2Q1W2 868 aaKnown RBP18.57■□□□□ 0.56
CLN6-208ENST00000567060 IER5Q5VY09 327 aa18.57■□□□□ 0.56
CLN6-208ENST00000567060 RRAGBQ5VZM2 374 aa18.57■□□□□ 0.56
CLN6-208ENST00000567060 PLA2G4FQ68DD2 849 aa18.57■□□□□ 0.56
CLN6-208ENST00000567060 EFCAB12Q6NXP0 572 aa18.57■□□□□ 0.56
CLN6-208ENST00000567060 TRMT1LQ7Z2T5 733 aaKnown RBP18.57■□□□□ 0.56
CLN6-208ENST00000567060 SYT2Q8N9I0 419 aaPredicted RBP18.57■□□□□ 0.56
CLN6-208ENST00000567060 IQUBQ8NA54 791 aa18.57■□□□□ 0.56
CLN6-208ENST00000567060 GBP4Q96PP9 640 aa18.57■□□□□ 0.56
CLN6-208ENST00000567060 MTRQ99707 1265 aa18.57■□□□□ 0.56
CLN6-208ENST00000567060 LRRC27Q9C0I9 530 aa18.57■□□□□ 0.56
CLN6-208ENST00000567060 BHMT2Q9H2M3 363 aa18.57■□□□□ 0.56
CLN6-208ENST00000567060 KCNG1Q9UIX4 513 aa18.57■□□□□ 0.56
CLN6-208ENST00000567060 SQORQ9Y6N5 450 aa18.57■□□□□ 0.56
CLN6-208ENST00000567060 EVPLQ92817 2033 aa18.56■□□□□ 0.56
CLN6-208ENST00000567060 ZBBXA8MT70 800 aa18.56■□□□□ 0.56
CLN6-208ENST00000567060 SELPP16109 830 aa18.56■□□□□ 0.56
CLN6-208ENST00000567060 CYP11B2P19099 503 aa18.56■□□□□ 0.56
CLN6-208ENST00000567060 NPEPPSP55786 919 aa18.56■□□□□ 0.56
CLN6-208ENST00000567060 EMC2Q15006 297 aa18.56■□□□□ 0.56
CLN6-208ENST00000567060 ZRSR1Q15695 479 aaKnown RBP18.56■□□□□ 0.56
CLN6-208ENST00000567060 FAM26DQ5JW98 314 aa18.56■□□□□ 0.56
CLN6-208ENST00000567060 SPECC1Q5M775 1068 aa18.56■□□□□ 0.56
CLN6-208ENST00000567060 PADI6Q6TGC4 694 aa18.56■□□□□ 0.56
CLN6-208ENST00000567060 TRAPPC12Q8WVT3 735 aa18.56■□□□□ 0.56
CLN6-208ENST00000567060 LARP4BQ92615 738 aaKnown RBP18.56■□□□□ 0.56
CLN6-208ENST00000567060 C1QTNF1Q9BXJ1 281 aa18.56■□□□□ 0.56
CLN6-208ENST00000567060 EPHX3Q9H6B9 360 aa18.56■□□□□ 0.56
CLN6-208ENST00000567060 CERS4Q9HA82 394 aa18.56■□□□□ 0.56
CLN6-208ENST00000567060 E9PMD0 336 aa18.55■□□□□ 0.56
CLN6-208ENST00000567060 ARHGEF15O94989 841 aa18.55■□□□□ 0.56
CLN6-208ENST00000567060 CA3P07451 260 aa18.55■□□□□ 0.56
CLN6-208ENST00000567060 CKBP12277 381 aa18.55■□□□□ 0.56
CLN6-208ENST00000567060 HOXD11P31277 338 aaPredicted RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms