RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 CREBRFQ8IUR6 639 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 ANKRD18AQ8IVF6 992 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 CCDC33Q8N5R6 958 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 ZNF610Q8N9Z0 462 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 DNAJB8Q8NHS0 232 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 NPLOC4Q8TAT6 608 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 CXorf38Q8TB03 319 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 RIN2Q8WYP3 895 aaPredicted RBP3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 ASPNQ9BXN1 380 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 SLC26A6Q9BXS9 759 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 ZDHHC5Q9C0B5 715 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 NUP62CLQ9H1M0 184 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 TMEM60Q9H2L4 133 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 MKNK2Q9HBH9 465 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 AGO4Q9HCK5 861 aaKnown RBP3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 CEP131Q9UPN4 1083 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 CRYL1Q9Y2S2 319 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 ST14Q9Y5Y6 855 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 DDX3XO00571 662 aaKnown RBP eCLIP3.94□□□□□ -1.782e-17■■■□□ 16.5
HERPUD1-211ENST00000566550 LRIG2O94898 1065 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 PRAMEF1O95521 474 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 CD4P01730 458 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 ALDH2P05091 517 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 TMEM253P0C7T8 217 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 HSD3B1P14060 373 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 PDE6AP16499 860 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 PDCP20941 246 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 PTX3P26022 381 aaPredicted RBP3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 ETV3P41162 512 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 TECP42680 631 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 CTSWP56202 376 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 JAM2P57087 298 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 CCT2P78371 535 aaKnown RBP3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 SMAD3P84022 425 aaKnown RBP3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 PPFIA1Q13136 1202 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 KCNAB2Q13303 367 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 TAF5Q15542 800 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 SMAD2Q15796 467 aaKnown RBP3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 CCDC96Q2M329 555 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 HSF5Q4G112 596 aaPredicted RBP3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 CT83Q5H943 113 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 FAM209BQ5JX69 171 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 AGAP9Q5VTM2 703 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 LETMD1Q6P1Q0 360 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 CCDC62Q6P9F0 684 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 MPZL3Q6UWV2 235 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 C1orf122Q6ZSJ8 110 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 LCNL1Q6ZST4 164 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 DAAM2Q86T65 1068 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 SAPCD2Q86UD0 394 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 THEMISQ8N1K5 641 aaPredicted RBP3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 PLD6Q8N2A8 252 aaKnown RBP3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 TTC30BQ8N4P2 665 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 RCBTB1Q8NDN9 531 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 PANK1Q8TE04 598 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 RNF141Q8WVD5 230 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 RTF1Q92541 710 aaKnown RBP3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 COPS5Q92905 334 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 TBC1D20Q96BZ9 403 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 C1GALT1C1Q96EU7 318 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 PPM1MQ96MI6 270 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 SEC62Q99442 399 aaKnown RBP3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 ISCA1Q9BUE6 129 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 ANO3Q9BYT9 981 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 RSPH9Q9H1X1 276 aaPredicted RBP3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 LGR6Q9HBX8 967 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 C1GALT1Q9NS00 363 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 CHST7Q9NS84 486 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 GPATCH2Q9NW75 528 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 BTG4Q9NY30 223 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 IFT80Q9P2H3 777 aaPredicted RBP3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 MSRAQ9UJ68 235 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 TUBD1Q9UJT1 453 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 SLC45A1Q9Y2W3 748 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 SPO11Q9Y5K1 396 aa3.94□□□□□ -1.78
HERPUD1-211ENST00000566550 POM121BA6NF01 834 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 EIF3FO00303 357 aaPredicted RBP3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 ARNTLO00327 626 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 SCDO00767 359 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 AURKAO14965 403 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 SIGLEC6O43699 453 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 MYO1BO43795 1136 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 ENPP1P22413 925 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 CNTFP26441 200 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 STT3AP46977 705 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 PHC1P78364 1004 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 GRM1Q13255 1194 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 ALDH1L2Q3SY69 923 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 SPECC1Q5M775 1068 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 DACT2Q5SW24 774 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 FKBP15Q5T1M5 1219 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 C1QTNF12Q5T7M4 302 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 VPS53Q5VIR6 699 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 IZUMO3Q5VZ72 239 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 CPZQ66K79 652 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 SWSAP1Q6NVH7 229 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 MZT2BQ6NZ67 158 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 LMBR1LQ6UX01 489 aa3.93□□□□□ -1.78
HERPUD1-211ENST00000566550 SEZ6L2Q6UXD5 910 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms