RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 ATP6V0A4Q9HBG4 840 aa20.61■□□□□ 0.89
USB1-213ENST00000566292 KCNMB3Q9NPA1 279 aa20.61■□□□□ 0.89
USB1-213ENST00000566292 RNF19AQ9NV58 838 aa20.61■□□□□ 0.89
USB1-213ENST00000566292 RNF216Q9NWF9 866 aaPredicted RBP20.61■□□□□ 0.89
USB1-213ENST00000566292 EML1O00423 815 aa20.6■□□□□ 0.89
USB1-213ENST00000566292 LINC01565O15544 149 aa20.6■□□□□ 0.89
USB1-213ENST00000566292 DARSP14868 501 aaKnown RBP20.6■□□□□ 0.89
USB1-213ENST00000566292 FGFR4P22455 802 aa20.6■□□□□ 0.89
USB1-213ENST00000566292 ERICH6BQ5W0A0 696 aa20.6■□□□□ 0.89
USB1-213ENST00000566292 ADGRD2Q7Z7M1 963 aa20.6■□□□□ 0.89
USB1-213ENST00000566292 NEK8Q86SG6 692 aa20.6■□□□□ 0.89
USB1-213ENST00000566292 ZNF710Q8N1W2 664 aa20.6■□□□□ 0.89
USB1-213ENST00000566292 C1QTNF1Q9BXJ1 281 aa20.6■□□□□ 0.89
USB1-213ENST00000566292 IGFLR1Q9H665 355 aa20.6■□□□□ 0.89
USB1-213ENST00000566292 TYW1Q9NV66 732 aaKnown RBP20.6■□□□□ 0.89
USB1-213ENST00000566292 ORC3Q9UBD5 711 aaPredicted RBP20.6■□□□□ 0.89
USB1-213ENST00000566292 RAPGEFL1Q9UHV5 662 aa20.6■□□□□ 0.89
USB1-213ENST00000566292 VAV3Q9UKW4 847 aa20.6■□□□□ 0.89
USB1-213ENST00000566292 ARID2Q68CP9 1835 aa20.6■□□□□ 0.89
USB1-213ENST00000566292 IGKV6-21A0A0C4DH24 114 aa20.59■□□□□ 0.89
USB1-213ENST00000566292 TBX10O75333 385 aa20.59■□□□□ 0.89
USB1-213ENST00000566292 LARGE1O95461 756 aa20.59■□□□□ 0.89
USB1-213ENST00000566292 FDPSP14324 419 aaKnown RBP20.59■□□□□ 0.89
USB1-213ENST00000566292 XBP1P17861 261 aa20.59■□□□□ 0.89
USB1-213ENST00000566292 PPP2R5CQ13362 524 aa20.59■□□□□ 0.89
USB1-213ENST00000566292 ANKRD1Q15327 319 aa20.59■□□□□ 0.89
USB1-213ENST00000566292 ME3Q16798 604 aa20.59■□□□□ 0.89
USB1-213ENST00000566292 EARS2Q5JPH6 523 aaKnown RBP20.59■□□□□ 0.89
USB1-213ENST00000566292 SPOUT1Q5T280 376 aaKnown RBP20.59■□□□□ 0.89
USB1-213ENST00000566292 PPP4R3AQ6IN85 833 aa20.59■□□□□ 0.89
USB1-213ENST00000566292 PIK3AP1Q6ZUJ8 805 aa20.59■□□□□ 0.89
USB1-213ENST00000566292 ANO5Q75V66 913 aa20.59■□□□□ 0.89
USB1-213ENST00000566292 GJD3Q8N144 294 aa20.59■□□□□ 0.89
USB1-213ENST00000566292 NECAB1Q8N987 351 aa20.59■□□□□ 0.89
USB1-213ENST00000566292 CWH43Q9H720 699 aa20.59■□□□□ 0.89
USB1-213ENST00000566292 PCDHGC5Q9Y5F6 944 aa20.59■□□□□ 0.89
USB1-213ENST00000566292 C5orf42Q9H799 3197 aa20.59■□□□□ 0.89
USB1-213ENST00000566292 FAM205CA6NFA0 338 aa20.58■□□□□ 0.89
USB1-213ENST00000566292 DDX11L8A8MPP1 907 aa20.58■□□□□ 0.89
USB1-213ENST00000566292 CSDE1O75534 798 aaKnown RBP20.58■□□□□ 0.89
USB1-213ENST00000566292 ZSCAN20P17040 1043 aaPredicted RBP20.58■□□□□ 0.89
USB1-213ENST00000566292 PSMC5P62195 406 aa20.58■□□□□ 0.89
USB1-213ENST00000566292 ADAM15Q13444 863 aa20.58■□□□□ 0.89
USB1-213ENST00000566292 CLUL1Q15846 466 aa20.58■□□□□ 0.89
USB1-213ENST00000566292 ECHDC2Q86YB7 292 aa20.58■□□□□ 0.89
USB1-213ENST00000566292 COLGALT1Q8NBJ5 622 aa20.58■□□□□ 0.89
USB1-213ENST00000566292 NLRP7Q8WX94 980 aa20.58■□□□□ 0.89
USB1-213ENST00000566292 HAS1Q92839 578 aa20.58■□□□□ 0.89
USB1-213ENST00000566292 FAM20AQ96MK3 541 aa20.58■□□□□ 0.89
USB1-213ENST00000566292 SCLT1Q96NL6 688 aa20.58■□□□□ 0.89
USB1-213ENST00000566292 CASD1Q96PB1 797 aa20.58■□□□□ 0.89
USB1-213ENST00000566292 PCDHB12Q9Y5F1 795 aa20.58■□□□□ 0.89
USB1-213ENST00000566292 CCNT1O60563 726 aaKnown RBP20.57■□□□□ 0.88
USB1-213ENST00000566292 GCFC2P16383 781 aaKnown RBP20.57■□□□□ 0.88
USB1-213ENST00000566292 PLA2G4FQ68DD2 849 aa20.57■□□□□ 0.88
USB1-213ENST00000566292 LRRC55Q6ZSA7 311 aa20.57■□□□□ 0.88
USB1-213ENST00000566292 TMEM117Q9H0C3 514 aa20.57■□□□□ 0.88
USB1-213ENST00000566292 AAASQ9NRG9 546 aa20.57■□□□□ 0.88
USB1-213ENST00000566292 WRAP73Q9P2S5 460 aaPredicted RBP20.57■□□□□ 0.88
USB1-213ENST00000566292 A0A087WZ62 844 aa20.56■□□□□ 0.88
USB1-213ENST00000566292 PI4K2BG5E9Z4 385 aa20.56■□□□□ 0.88
USB1-213ENST00000566292 MAFO75444 373 aaPredicted RBP20.56■□□□□ 0.88
USB1-213ENST00000566292 FGF18O76093 207 aa20.56■□□□□ 0.88
USB1-213ENST00000566292 SSTR3P32745 418 aaPredicted RBP20.56■□□□□ 0.88
USB1-213ENST00000566292 UBE3AQ05086 875 aa20.56■□□□□ 0.88
USB1-213ENST00000566292 NR5A1Q13285 461 aa20.56■□□□□ 0.88
USB1-213ENST00000566292 POTEDQ86YR6 584 aa20.56■□□□□ 0.88
USB1-213ENST00000566292 TNFRSF25Q93038 417 aa20.56■□□□□ 0.88
USB1-213ENST00000566292 GTF3C6Q969F1 213 aa20.56■□□□□ 0.88
USB1-213ENST00000566292 FDXACB1Q9BRP7 624 aaPredicted RBP20.56■□□□□ 0.88
USB1-213ENST00000566292 C11orf16Q9NQ32 467 aa20.56■□□□□ 0.88
USB1-213ENST00000566292 FAM50BQ9Y247 325 aa20.56■□□□□ 0.88
USB1-213ENST00000566292 TBX3O15119 743 aa20.55■□□□□ 0.88
USB1-213ENST00000566292 MBTPS2O43462 519 aa20.55■□□□□ 0.88
USB1-213ENST00000566292 ATF7P17544 494 aaPredicted RBP20.55■□□□□ 0.88
USB1-213ENST00000566292 QARSP47897 775 aaKnown RBP20.55■□□□□ 0.88
USB1-213ENST00000566292 NPEPPSP55786 919 aa20.55■□□□□ 0.88
USB1-213ENST00000566292 ZP2Q05996 745 aa20.55■□□□□ 0.88
USB1-213ENST00000566292 CLLU1OSQ5K130 101 aa20.55■□□□□ 0.88
USB1-213ENST00000566292 RBM23Q86U06 439 aaKnown RBP20.55■□□□□ 0.88
USB1-213ENST00000566292 ZNF598Q86UK7 904 aaKnown RBP20.55■□□□□ 0.88
USB1-213ENST00000566292 THNSL1Q8IYQ7 743 aa20.55■□□□□ 0.88
USB1-213ENST00000566292 EFHBQ8N7U6 833 aa20.55■□□□□ 0.88
USB1-213ENST00000566292 ZNF579Q8NAF0 562 aaKnown RBP20.55■□□□□ 0.88
USB1-213ENST00000566292 NSUN7Q8NE18 718 aaKnown RBP20.55■□□□□ 0.88
USB1-213ENST00000566292 WASF1Q92558 559 aa20.55■□□□□ 0.88
USB1-213ENST00000566292 PPP2R3CQ969Q6 453 aa20.55■□□□□ 0.88
USB1-213ENST00000566292 GCOM2Q9BZD3 368 aaPredicted RBP20.55■□□□□ 0.88
USB1-213ENST00000566292 CYP26B1Q9NR63 512 aa20.55■□□□□ 0.88
USB1-213ENST00000566292 SUCLA2Q9P2R7 463 aaPredicted RBP20.55■□□□□ 0.88
USB1-213ENST00000566292 A0A0U1RQF3 1178 aa20.54■□□□□ 0.88
USB1-213ENST00000566292 HOXA2O43364 376 aa20.54■□□□□ 0.88
USB1-213ENST00000566292 SEC24BO95487 1268 aa20.54■□□□□ 0.88
USB1-213ENST00000566292 P4HBP07237 508 aaKnown RBP20.54■□□□□ 0.88
USB1-213ENST00000566292 LAG3P18627 525 aa20.54■□□□□ 0.88
USB1-213ENST00000566292 KRT2P35908 639 aa20.54■□□□□ 0.88
USB1-213ENST00000566292 NRIP1P48552 1158 aa20.54■□□□□ 0.88
USB1-213ENST00000566292 DNM2P50570 870 aa20.54■□□□□ 0.88
USB1-213ENST00000566292 ERVFC1P60507 584 aa20.54■□□□□ 0.88
USB1-213ENST00000566292 CDC42EP1Q00587 391 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms