RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 TMC7Q7Z402 723 aa14.5□□□□□ -0.09
RNF40-208ENST00000565995 ZNF598Q86UK7 904 aaKnown RBP14.5□□□□□ -0.09
RNF40-208ENST00000565995 SLC39A11Q8N1S5 342 aa14.5□□□□□ -0.09
RNF40-208ENST00000565995 LRRC43Q8N309 656 aa14.5□□□□□ -0.09
RNF40-208ENST00000565995 ADAMTS10Q9H324 1103 aa14.5□□□□□ -0.09
RNF40-208ENST00000565995 USTQ9Y2C2 406 aa14.5□□□□□ -0.09
RNF40-208ENST00000565995 IRAK3Q9Y616 596 aa14.5□□□□□ -0.09
RNF40-208ENST00000565995 A0A0U1RQF3 1178 aa14.49□□□□□ -0.09
RNF40-208ENST00000565995 FAM86B1E9PN63 330 aa14.49□□□□□ -0.09
RNF40-208ENST00000565995 IPO5O00410 1097 aaKnown RBP14.49□□□□□ -0.09
RNF40-208ENST00000565995 BACH1O14867 736 aa14.49□□□□□ -0.09
RNF40-208ENST00000565995 MAGEB2O15479 319 aa14.49□□□□□ -0.09
RNF40-208ENST00000565995 CLASP2O75122 1294 aaKnown RBP14.49□□□□□ -0.09
RNF40-208ENST00000565995 FAM86B2P0C5J1 330 aa14.49□□□□□ -0.09
RNF40-208ENST00000565995 EIF4BP23588 611 aaKnown RBP14.49□□□□□ -0.09
RNF40-208ENST00000565995 NAPAP54920 295 aa14.49□□□□□ -0.09
RNF40-208ENST00000565995 NECTIN1Q15223 517 aa14.49□□□□□ -0.09
RNF40-208ENST00000565995 ASTLQ6HA08 431 aaPredicted RBP14.49□□□□□ -0.09
RNF40-208ENST00000565995 ZNF746Q6NUN9 644 aaPredicted RBP14.49□□□□□ -0.09
RNF40-208ENST00000565995 ZBTB33Q86T24 672 aa14.49□□□□□ -0.09
RNF40-208ENST00000565995 ECHDC2Q86YB7 292 aa14.49□□□□□ -0.09
RNF40-208ENST00000565995 PLCD3Q8N3E9 789 aa14.49□□□□□ -0.09
RNF40-208ENST00000565995 RSPH1Q8WYR4 309 aa14.49□□□□□ -0.09
RNF40-208ENST00000565995 PGBD1Q96JS3 809 aa14.49□□□□□ -0.09
RNF40-208ENST00000565995 APOL5Q9BWW9 433 aa14.49□□□□□ -0.09
RNF40-208ENST00000565995 TBC1D22BQ9NU19 505 aa14.49□□□□□ -0.09
RNF40-208ENST00000565995 RBM28Q9NW13 759 aaKnown RBP14.49□□□□□ -0.09
RNF40-208ENST00000565995 CEP131Q9UPN4 1083 aa14.49□□□□□ -0.09
RNF40-208ENST00000565995 SMCO2A6NFE2 343 aa14.48□□□□□ -0.09
RNF40-208ENST00000565995 VTNP04004 478 aa14.48□□□□□ -0.09
RNF40-208ENST00000565995 ZSCAN20P17040 1043 aaPredicted RBP14.48□□□□□ -0.09
RNF40-208ENST00000565995 IBSPP21815 317 aaPredicted RBP14.48□□□□□ -0.09
RNF40-208ENST00000565995 ADCY7P51828 1080 aa14.48□□□□□ -0.09
RNF40-208ENST00000565995 CLLU1OSQ5K130 101 aa14.48□□□□□ -0.09
RNF40-208ENST00000565995 KIAA1841Q6NSI8 718 aa14.48□□□□□ -0.09
RNF40-208ENST00000565995 SMAP1Q8IYB5 467 aaPredicted RBP14.48□□□□□ -0.09
RNF40-208ENST00000565995 LSG1Q9H089 658 aaKnown RBP14.48□□□□□ -0.09
RNF40-208ENST00000565995 BARHL2Q9NY43 387 aa14.48□□□□□ -0.09
RNF40-208ENST00000565995 CDH22Q9UJ99 828 aa14.48□□□□□ -0.09
RNF40-208ENST00000565995 MIA3Q5JRA6 1907 aa14.47□□□□□ -0.09
RNF40-208ENST00000565995 DNAH14Q0VDD8 3507 aa14.47□□□□□ -0.09
RNF40-208ENST00000565995 CARNS1A5YM72 827 aa14.47□□□□□ -0.09
RNF40-208ENST00000565995 SLC27A2O14975 620 aa14.47□□□□□ -0.09
RNF40-208ENST00000565995 ZNF76P36508 570 aa14.47□□□□□ -0.09
RNF40-208ENST00000565995 NLRP11P59045 1033 aaKnown RBP14.47□□□□□ -0.09
RNF40-208ENST00000565995 GIT2Q14161 759 aa14.47□□□□□ -0.09
RNF40-208ENST00000565995 APOA5Q6Q788 366 aa14.47□□□□□ -0.09
RNF40-208ENST00000565995 ERMP1Q7Z2K6 904 aa14.47□□□□□ -0.09
RNF40-208ENST00000565995 PLA2G4DQ86XP0 818 aa14.47□□□□□ -0.09
RNF40-208ENST00000565995 ABI1Q8IZP0 508 aa14.47□□□□□ -0.09
RNF40-208ENST00000565995 TRAIPQ9BWF2 469 aa14.47□□□□□ -0.09
RNF40-208ENST00000565995 DZANK1Q9NVP4 752 aa14.47□□□□□ -0.09
RNF40-208ENST00000565995 PCDHA10Q9Y5I2 948 aa14.47□□□□□ -0.09
RNF40-208ENST00000565995 DOCK6Q96HP0 2047 aa14.47□□□□□ -0.09
RNF40-208ENST00000565995 DDX39AO00148 427 aaKnown RBP14.46□□□□□ -0.09
RNF40-208ENST00000565995 CXCL14O95715 111 aa14.46□□□□□ -0.09
RNF40-208ENST00000565995 SP100P23497 879 aaPredicted RBP14.46□□□□□ -0.09
RNF40-208ENST00000565995 PBX3P40426 434 aa14.46□□□□□ -0.09
RNF40-208ENST00000565995 POLGP54098 1239 aaPredicted RBP14.46□□□□□ -0.09
RNF40-208ENST00000565995 BMS1Q14692 1282 aaKnown RBP14.46□□□□□ -0.09
RNF40-208ENST00000565995 ATAT1Q5SQI0 421 aa14.46□□□□□ -0.09
RNF40-208ENST00000565995 MCTP2Q6DN12 878 aa14.46□□□□□ -0.09
RNF40-208ENST00000565995 EFCAB12Q6NXP0 572 aa14.46□□□□□ -0.09
RNF40-208ENST00000565995 MICU3Q86XE3 530 aa14.46□□□□□ -0.09
RNF40-208ENST00000565995 METTL13Q8N6R0 699 aa14.46□□□□□ -0.09
RNF40-208ENST00000565995 SLC22A17Q8WUG5 538 aa14.46□□□□□ -0.09
RNF40-208ENST00000565995 CCDC136Q96JN2 1154 aa14.46□□□□□ -0.09
RNF40-208ENST00000565995 FAM167AQ96KS9 214 aa14.46□□□□□ -0.09
RNF40-208ENST00000565995 MRPL9Q9BYD2 267 aaKnown RBP14.46□□□□□ -0.09
RNF40-208ENST00000565995 ZBP1Q9H171 429 aa14.46□□□□□ -0.09
RNF40-208ENST00000565995 TSHZ2Q9NRE2 1034 aa14.46□□□□□ -0.09
RNF40-208ENST00000565995 PPP4R2Q9NY27 417 aa14.46□□□□□ -0.09
RNF40-208ENST00000565995 LIMD1Q9UGP4 676 aa14.46□□□□□ -0.09
RNF40-208ENST00000565995 V9GY48 417 aaPredicted RBP14.46□□□□□ -0.09
RNF40-208ENST00000565995 EP300Q09472 2414 aaPredicted RBP14.45□□□□□ -0.1
RNF40-208ENST00000565995 PSAPP07602 524 aa14.45□□□□□ -0.1
RNF40-208ENST00000565995 TMOD1P28289 359 aa14.45□□□□□ -0.1
RNF40-208ENST00000565995 ALDH7A1P49419 539 aaKnown RBP14.45□□□□□ -0.1
RNF40-208ENST00000565995 GPC3P51654 580 aa14.45□□□□□ -0.1
RNF40-208ENST00000565995 BCAR1P56945 870 aa14.45□□□□□ -0.1
RNF40-208ENST00000565995 SETQ01105 290 aaPredicted RBP14.45□□□□□ -0.1
RNF40-208ENST00000565995 EXOSC10Q01780 885 aaKnown RBP14.45□□□□□ -0.1
RNF40-208ENST00000565995 CREB3L3Q68CJ9 461 aa14.45□□□□□ -0.1
RNF40-208ENST00000565995 SYNE3Q6ZMZ3 975 aa14.45□□□□□ -0.1
RNF40-208ENST00000565995 DDX53Q86TM3 631 aaKnown RBP14.45□□□□□ -0.1
RNF40-208ENST00000565995 RAB11FIP4Q86YS3 637 aa14.45□□□□□ -0.1
RNF40-208ENST00000565995 MAP7D2Q96T17 732 aa14.45□□□□□ -0.1
RNF40-208ENST00000565995 PPP1R16BQ96T49 567 aa14.45□□□□□ -0.1
RNF40-208ENST00000565995 ZNF577Q9BSK1 485 aa14.45□□□□□ -0.1
RNF40-208ENST00000565995 LRRC2Q9BYS8 371 aa14.45□□□□□ -0.1
RNF40-208ENST00000565995 SMOC2Q9H3U7 446 aa14.45□□□□□ -0.1
RNF40-208ENST00000565995 CHST12Q9NRB3 414 aa14.45□□□□□ -0.1
RNF40-208ENST00000565995 DACT1Q9NYF0 836 aa14.45□□□□□ -0.1
RNF40-208ENST00000565995 ARID2Q68CP9 1835 aa14.45□□□□□ -0.1
RNF40-208ENST00000565995 CACNA1IQ9P0X4 2223 aa14.45□□□□□ -0.1
RNF40-208ENST00000565995 MYH15Q9Y2K3 1946 aa14.45□□□□□ -0.1
RNF40-208ENST00000565995 ESYT2A0FGR8 921 aa14.44□□□□□ -0.1
RNF40-208ENST00000565995 CTSAP10619 480 aa14.44□□□□□ -0.1
RNF40-208ENST00000565995 DARSP14868 501 aaKnown RBP14.44□□□□□ -0.1
RNF40-208ENST00000565995 CIITAP33076 1130 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms