RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 RASSF8Q8NHQ8 419 aa14.01□□□□□ -0.17
SF3B3-206ENST00000565990 WNT8BQ93098 351 aa14.01□□□□□ -0.17
SF3B3-206ENST00000565990 DHX58Q96C10 678 aa14.01□□□□□ -0.17
SF3B3-206ENST00000565990 TNMDQ9H2S6 317 aa14.01□□□□□ -0.17
SF3B3-206ENST00000565990 SERTAD1Q9UHV2 236 aa14.01□□□□□ -0.17
SF3B3-206ENST00000565990 MYMKA6NI61 221 aa14□□□□□ -0.17
SF3B3-206ENST00000565990 KIAA0355O15063 1070 aa14□□□□□ -0.17
SF3B3-206ENST00000565990 CAND2O75155 1236 aa14□□□□□ -0.17
SF3B3-206ENST00000565990 LIG1P18858 919 aa14□□□□□ -0.17
SF3B3-206ENST00000565990 TMOD1P28289 359 aa14□□□□□ -0.17
SF3B3-206ENST00000565990 DNM2P50570 870 aa14□□□□□ -0.17
SF3B3-206ENST00000565990 POLGP54098 1239 aaPredicted RBP14□□□□□ -0.17
SF3B3-206ENST00000565990 CDC42EP1Q00587 391 aa14□□□□□ -0.17
SF3B3-206ENST00000565990 MDM2Q00987 491 aaPredicted RBP14□□□□□ -0.17
SF3B3-206ENST00000565990 POU5F1BQ06416 359 aa14□□□□□ -0.17
SF3B3-206ENST00000565990 DRP2Q13474 957 aa14□□□□□ -0.17
SF3B3-206ENST00000565990 GIT2Q14161 759 aa14□□□□□ -0.17
SF3B3-206ENST00000565990 EMC2Q15006 297 aa14□□□□□ -0.17
SF3B3-206ENST00000565990 KRBA2Q6ZNG9 492 aa14□□□□□ -0.17
SF3B3-206ENST00000565990 DNAJB3Q8WWF6 145 aa14□□□□□ -0.17
SF3B3-206ENST00000565990 TCP11Q8WWU5 503 aa14□□□□□ -0.17
SF3B3-206ENST00000565990 PAGE5Q96GU1 130 aa14□□□□□ -0.17
SF3B3-206ENST00000565990 C7orf25Q9BPX7 421 aa14□□□□□ -0.17
SF3B3-206ENST00000565990 NTPCRQ9BSD7 190 aaKnown RBP14□□□□□ -0.17
SF3B3-206ENST00000565990 HTATIP2Q9BUP3 242 aa14□□□□□ -0.17
SF3B3-206ENST00000565990 RUSC1Q9BVN2 902 aa14□□□□□ -0.17
SF3B3-206ENST00000565990 LRRC27Q9C0I9 530 aa14□□□□□ -0.17
SF3B3-206ENST00000565990 SUGCTQ9HAC7 445 aa14□□□□□ -0.17
SF3B3-206ENST00000565990 ATP6V0A4Q9HBG4 840 aa14□□□□□ -0.17
SF3B3-206ENST00000565990 TBX21Q9UL17 535 aa14□□□□□ -0.17
SF3B3-206ENST00000565990 ATP11BQ9Y2G3 1177 aa14□□□□□ -0.17
SF3B3-206ENST00000565990 ZKSCAN5Q9Y2L8 839 aa14□□□□□ -0.17
SF3B3-206ENST00000565990 SYCE3A1L190 88 aa13.99□□□□□ -0.17
SF3B3-206ENST00000565990 PITPNM1O00562 1244 aa13.99□□□□□ -0.17
SF3B3-206ENST00000565990 GPR32O75388 356 aa13.99□□□□□ -0.17
SF3B3-206ENST00000565990 NR1I2O75469 434 aa13.99□□□□□ -0.17
SF3B3-206ENST00000565990 CLTBP09497 229 aa13.99□□□□□ -0.17
SF3B3-206ENST00000565990 AMPD3Q01432 767 aa13.99□□□□□ -0.17
SF3B3-206ENST00000565990 MAPK7Q13164 816 aa13.99□□□□□ -0.17
SF3B3-206ENST00000565990 TRAF7Q6Q0C0 670 aa13.99□□□□□ -0.17
SF3B3-206ENST00000565990 METTL13Q8N6R0 699 aa13.99□□□□□ -0.17
SF3B3-206ENST00000565990 CAGE1Q8TC20 777 aa13.99□□□□□ -0.17
SF3B3-206ENST00000565990 PRPF31Q8WWY3 499 aaKnown RBP13.99□□□□□ -0.17
SF3B3-206ENST00000565990 TMEM143Q96AN5 459 aa13.99□□□□□ -0.17
SF3B3-206ENST00000565990 DNAJC19Q96DA6 116 aa13.99□□□□□ -0.17
SF3B3-206ENST00000565990 NOC4LQ9BVI4 516 aaKnown RBP13.99□□□□□ -0.17
SF3B3-206ENST00000565990 C17orf75Q9HAS0 396 aa13.99□□□□□ -0.17
SF3B3-206ENST00000565990 SUCLA2Q9P2R7 463 aaPredicted RBP13.99□□□□□ -0.17
SF3B3-206ENST00000565990 NOD1Q9Y239 953 aa13.99□□□□□ -0.17
SF3B3-206ENST00000565990 FRMD3A2A2Y4 597 aa13.98□□□□□ -0.17
SF3B3-206ENST00000565990 TRIM43BA6NCK2 446 aa13.98□□□□□ -0.17
SF3B3-206ENST00000565990 CHRNA1P02708 482 aa13.98□□□□□ -0.17
SF3B3-206ENST00000565990 MYL1P05976 194 aa13.98□□□□□ -0.17
SF3B3-206ENST00000565990 TPM3P06753 285 aa13.98□□□□□ -0.17
SF3B3-206ENST00000565990 CKBP12277 381 aa13.98□□□□□ -0.17
SF3B3-206ENST00000565990 CLCN3P51790 818 aa13.98□□□□□ -0.17
SF3B3-206ENST00000565990 ZNF131P52739 623 aa13.98□□□□□ -0.17
SF3B3-206ENST00000565990 MGAT3Q09327 533 aa13.98□□□□□ -0.17
SF3B3-206ENST00000565990 BFSP2Q13515 415 aa13.98□□□□□ -0.17
SF3B3-206ENST00000565990 MXD4Q14582 209 aaPredicted RBP13.98□□□□□ -0.17
SF3B3-206ENST00000565990 KANK3Q6NY19 840 aa13.98□□□□□ -0.17
SF3B3-206ENST00000565990 RSPH3Q86UC2 560 aa13.98□□□□□ -0.17
SF3B3-206ENST00000565990 GPBP1Q86WP2 473 aa13.98□□□□□ -0.17
SF3B3-206ENST00000565990 CEP57L1Q8IYX8 460 aa13.98□□□□□ -0.17
SF3B3-206ENST00000565990 DAW1Q8N136 415 aa13.98□□□□□ -0.17
SF3B3-206ENST00000565990 LRRC71Q8N4P6 559 aa13.98□□□□□ -0.17
SF3B3-206ENST00000565990 DDX12PQ92771 950 aa13.98□□□□□ -0.17
SF3B3-206ENST00000565990 TRIM43Q96BQ3 446 aaPredicted RBP13.98□□□□□ -0.17
SF3B3-206ENST00000565990 CCDC43Q96MW1 224 aaKnown RBP13.98□□□□□ -0.17
SF3B3-206ENST00000565990 TRIM9Q9C026 710 aa13.98□□□□□ -0.17
SF3B3-206ENST00000565990 ADAMTS10Q9H324 1103 aa13.98□□□□□ -0.17
SF3B3-206ENST00000565990 BMP2KQ9NSY1 1161 aaPredicted RBP13.98□□□□□ -0.17
SF3B3-206ENST00000565990 TMEM39AQ9NV64 488 aa13.98□□□□□ -0.17
SF3B3-206ENST00000565990 KCNG1Q9UIX4 513 aa13.98□□□□□ -0.17
SF3B3-206ENST00000565990 ODF2LQ9ULJ1 636 aa13.98□□□□□ -0.17
SF3B3-206ENST00000565990 SIP14410 1827 aa13.97□□□□□ -0.17
SF3B3-206ENST00000565990 NPHP3-ACAD11A0A0J9YXS1 232 aa13.97□□□□□ -0.17
SF3B3-206ENST00000565990 USO1O60763 962 aaKnown RBP13.97□□□□□ -0.17
SF3B3-206ENST00000565990 HIP1RO75146 1068 aa13.97□□□□□ -0.17
SF3B3-206ENST00000565990 TIMP1P01033 207 aa13.97□□□□□ -0.17
SF3B3-206ENST00000565990 SSBP05455 408 aaKnown RBP eCLIP13.97□□□□□ -0.17
SF3B3-206ENST00000565990 THPOP40225 353 aa13.97□□□□□ -0.17
SF3B3-206ENST00000565990 LAMTOR4Q0VGL1 99 aa13.97□□□□□ -0.17
SF3B3-206ENST00000565990 DHX8Q14562 1220 aaKnown RBP13.97□□□□□ -0.17
SF3B3-206ENST00000565990 ZNF618Q5T7W0 954 aa13.97□□□□□ -0.17
SF3B3-206ENST00000565990 IFNLR1Q8IU57 520 aaPredicted RBP13.97□□□□□ -0.17
SF3B3-206ENST00000565990 CCDC155Q8N6L0 562 aa13.97□□□□□ -0.17
SF3B3-206ENST00000565990 CNNM3Q8NE01 707 aa13.97□□□□□ -0.17
SF3B3-206ENST00000565990 PSPC1Q8WXF1 523 aaKnown RBP13.97□□□□□ -0.17
SF3B3-206ENST00000565990 STAMQ92783 540 aa13.97□□□□□ -0.17
SF3B3-206ENST00000565990 KIFAP3Q92845 792 aa13.97□□□□□ -0.17
SF3B3-206ENST00000565990 KCNN1Q92952 543 aa13.97□□□□□ -0.17
SF3B3-206ENST00000565990 NAP1L5Q96NT1 182 aaPredicted RBP13.97□□□□□ -0.17
SF3B3-206ENST00000565990 CELF4Q9BZC1 486 aaKnown RBP13.97□□□□□ -0.17
SF3B3-206ENST00000565990 PVALEFA0A1B0GWK0 134 aa13.96□□□□□ -0.17
SF3B3-206ENST00000565990 EVI5O60447 810 aa13.96□□□□□ -0.17
SF3B3-206ENST00000565990 IQCF3P0C7M6 154 aa13.96□□□□□ -0.17
SF3B3-206ENST00000565990 GLRA2P23416 452 aa13.96□□□□□ -0.17
SF3B3-206ENST00000565990 ITGB8P26012 769 aa13.96□□□□□ -0.17
SF3B3-206ENST00000565990 GPC3P51654 580 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms