RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 GJD3Q8N144 294 aa26.74■■□□□ 1.87
RAB40C-209ENST00000565511 RDM1Q8NG50 284 aa26.74■■□□□ 1.87
RAB40C-209ENST00000565511 SLKQ9H2G2 1235 aaPredicted RBP26.74■■□□□ 1.87
RAB40C-209ENST00000565511 TYW1Q9NV66 732 aaKnown RBP26.74■■□□□ 1.87
RAB40C-209ENST00000565511 TMEM161AQ9NX61 479 aa26.74■■□□□ 1.87
RAB40C-209ENST00000565511 DARSP14868 501 aaKnown RBP26.73■■□□□ 1.87
RAB40C-209ENST00000565511 EIF4BP23588 611 aaKnown RBP26.73■■□□□ 1.87
RAB40C-209ENST00000565511 AK2P54819 239 aa26.73■■□□□ 1.87
RAB40C-209ENST00000565511 TBC1D8BQ0IIM8 1120 aa26.73■■□□□ 1.87
RAB40C-209ENST00000565511 ODR4Q5SWX8 454 aa26.73■■□□□ 1.87
RAB40C-209ENST00000565511 LRRC55Q6ZSA7 311 aa26.73■■□□□ 1.87
RAB40C-209ENST00000565511 COLGALT1Q8NBJ5 622 aa26.73■■□□□ 1.87
RAB40C-209ENST00000565511 LRFN3Q9BTN0 628 aa26.73■■□□□ 1.87
RAB40C-209ENST00000565511 C1QTNF1Q9BXJ1 281 aa26.73■■□□□ 1.87
RAB40C-209ENST00000565511 NIFKQ9BYG3 293 aaKnown RBP26.73■■□□□ 1.87
RAB40C-209ENST00000565511 ATP6V0A4Q9HBG4 840 aa26.73■■□□□ 1.87
RAB40C-209ENST00000565511 ZP2Q05996 745 aa26.72■■□□□ 1.87
RAB40C-209ENST00000565511 ADAM15Q13444 863 aa26.72■■□□□ 1.87
RAB40C-209ENST00000565511 PLA2G4FQ68DD2 849 aa26.72■■□□□ 1.87
RAB40C-209ENST00000565511 FAM177A1Q8N128 213 aaPredicted RBP26.72■■□□□ 1.87
RAB40C-209ENST00000565511 NECAB1Q8N987 351 aa26.72■■□□□ 1.87
RAB40C-209ENST00000565511 CASD1Q96PB1 797 aa26.72■■□□□ 1.87
RAB40C-209ENST00000565511 KCNMB3Q9NPA1 279 aa26.72■■□□□ 1.87
RAB40C-209ENST00000565511 PPP4R2Q9NY27 417 aa26.72■■□□□ 1.87
RAB40C-209ENST00000565511 WRAP73Q9P2S5 460 aaPredicted RBP26.72■■□□□ 1.87
RAB40C-209ENST00000565511 IGKV6-21A0A0C4DH24 114 aa26.71■■□□□ 1.87
RAB40C-209ENST00000565511 GLP2RO95838 553 aa26.71■■□□□ 1.87
RAB40C-209ENST00000565511 FDPSP14324 419 aaKnown RBP26.71■■□□□ 1.87
RAB40C-209ENST00000565511 ATF7P17544 494 aaPredicted RBP26.71■■□□□ 1.87
RAB40C-209ENST00000565511 TMOD1P28289 359 aa26.71■■□□□ 1.87
RAB40C-209ENST00000565511 RBM10P98175 930 aaKnown RBP26.71■■□□□ 1.87
RAB40C-209ENST00000565511 PUS10Q3MIT2 529 aaKnown RBP26.71■■□□□ 1.87
RAB40C-209ENST00000565511 XKR3Q5GH77 459 aa26.71■■□□□ 1.87
RAB40C-209ENST00000565511 SPOUT1Q5T280 376 aaKnown RBP26.71■■□□□ 1.87
RAB40C-209ENST00000565511 ANO5Q75V66 913 aa26.71■■□□□ 1.87
RAB40C-209ENST00000565511 ECHDC2Q86YB7 292 aa26.71■■□□□ 1.87
RAB40C-209ENST00000565511 ELAC1Q9H777 363 aaKnown RBP26.71■■□□□ 1.87
RAB40C-209ENST00000565511 ARID2Q68CP9 1835 aa26.71■■□□□ 1.87
RAB40C-209ENST00000565511 PI4K2BG5E9Z4 385 aa26.7■■□□□ 1.86
RAB40C-209ENST00000565511 MBTPS2O43462 519 aa26.7■■□□□ 1.86
RAB40C-209ENST00000565511 SSTR3P32745 418 aaPredicted RBP26.7■■□□□ 1.86
RAB40C-209ENST00000565511 PBX3P40426 434 aa26.7■■□□□ 1.86
RAB40C-209ENST00000565511 NRIP1P48552 1158 aa26.7■■□□□ 1.86
RAB40C-209ENST00000565511 CLLU1OSQ5K130 101 aa26.7■■□□□ 1.86
RAB40C-209ENST00000565511 PIK3AP1Q6ZUJ8 805 aa26.7■■□□□ 1.86
RAB40C-209ENST00000565511 RBM23Q86U06 439 aaKnown RBP26.7■■□□□ 1.86
RAB40C-209ENST00000565511 ZNF579Q8NAF0 562 aaKnown RBP26.7■■□□□ 1.86
RAB40C-209ENST00000565511 NLRP7Q8WX94 980 aa26.7■■□□□ 1.86
RAB40C-209ENST00000565511 HAS1Q92839 578 aa26.7■■□□□ 1.86
RAB40C-209ENST00000565511 CLEC1BQ9P126 229 aa26.7■■□□□ 1.86
RAB40C-209ENST00000565511 CCDC194A0A1B0GVG4 234 aa26.69■■□□□ 1.86
RAB40C-209ENST00000565511 NCK2O43639 380 aa26.69■■□□□ 1.86
RAB40C-209ENST00000565511 CDKL5O76039 1030 aa26.69■■□□□ 1.86
RAB40C-209ENST00000565511 FGF18O76093 207 aa26.69■■□□□ 1.86
RAB40C-209ENST00000565511 ERVFC1P60507 584 aa26.69■■□□□ 1.86
RAB40C-209ENST00000565511 FAM43BQ6ZT52 329 aaPredicted RBP26.69■■□□□ 1.86
RAB40C-209ENST00000565511 NEK8Q86SG6 692 aa26.69■■□□□ 1.86
RAB40C-209ENST00000565511 ZNF598Q86UK7 904 aaKnown RBP26.69■■□□□ 1.86
RAB40C-209ENST00000565511 VN1R2Q8NFZ6 395 aa26.69■■□□□ 1.86
RAB40C-209ENST00000565511 MSLNLQ96KJ4 702 aa26.69■■□□□ 1.86
RAB40C-209ENST00000565511 SCLT1Q96NL6 688 aa26.69■■□□□ 1.86
RAB40C-209ENST00000565511 TMEM117Q9H0C3 514 aa26.69■■□□□ 1.86
RAB40C-209ENST00000565511 ORC3Q9UBD5 711 aaPredicted RBP26.69■■□□□ 1.86
RAB40C-209ENST00000565511 C19orf67A6NJJ6 358 aa26.68■■□□□ 1.86
RAB40C-209ENST00000565511 DDX11L8A8MPP1 907 aa26.68■■□□□ 1.86
RAB40C-209ENST00000565511 NPEPPSP55786 919 aa26.68■■□□□ 1.86
RAB40C-209ENST00000565511 ANAPC15P60006 121 aa26.68■■□□□ 1.86
RAB40C-209ENST00000565511 NR5A1Q13285 461 aa26.68■■□□□ 1.86
RAB40C-209ENST00000565511 PPP2R5CQ13362 524 aa26.68■■□□□ 1.86
RAB40C-209ENST00000565511 ME3Q16798 604 aa26.68■■□□□ 1.86
RAB40C-209ENST00000565511 POTEDQ86YR6 584 aa26.68■■□□□ 1.86
RAB40C-209ENST00000565511 KSR1Q8IVT5 923 aa26.68■■□□□ 1.86
RAB40C-209ENST00000565511 EFHBQ8N7U6 833 aa26.68■■□□□ 1.86
RAB40C-209ENST00000565511 TNFRSF25Q93038 417 aa26.68■■□□□ 1.86
RAB40C-209ENST00000565511 PCDHB12Q9Y5F1 795 aa26.68■■□□□ 1.86
RAB40C-209ENST00000565511 A0A087WZ62 844 aa26.67■■□□□ 1.86
RAB40C-209ENST00000565511 FSCN2O14926 492 aa26.67■■□□□ 1.86
RAB40C-209ENST00000565511 ST3GAL1Q11201 340 aa26.67■■□□□ 1.86
RAB40C-209ENST00000565511 SMAD2Q15796 467 aaKnown RBP26.67■■□□□ 1.86
RAB40C-209ENST00000565511 PPP4R3AQ6IN85 833 aa26.67■■□□□ 1.86
RAB40C-209ENST00000565511 THNSL1Q8IYQ7 743 aa26.67■■□□□ 1.86
RAB40C-209ENST00000565511 RNF169Q8NCN4 708 aa26.67■■□□□ 1.86
RAB40C-209ENST00000565511 FDXACB1Q9BRP7 624 aaPredicted RBP26.67■■□□□ 1.86
RAB40C-209ENST00000565511 CD207Q9UJ71 328 aa26.67■■□□□ 1.86
RAB40C-209ENST00000565511 BARX2Q9UMQ3 279 aaPredicted RBP26.67■■□□□ 1.86
RAB40C-209ENST00000565511 PER2O15055 1255 aa26.66■■□□□ 1.86
RAB40C-209ENST00000565511 CCNT1O60563 726 aaKnown RBP26.66■■□□□ 1.86
RAB40C-209ENST00000565511 NDUFV1P49821 464 aa26.66■■□□□ 1.86
RAB40C-209ENST00000565511 PSMC5P62195 406 aa26.66■■□□□ 1.86
RAB40C-209ENST00000565511 SMAD4Q13485 552 aaKnown RBP26.66■■□□□ 1.86
RAB40C-209ENST00000565511 TMEM31Q5JXX7 168 aa26.66■■□□□ 1.86
RAB40C-209ENST00000565511 TLR9Q9NR96 1032 aa26.66■■□□□ 1.86
RAB40C-209ENST00000565511 WNT7AO00755 349 aa26.65■■□□□ 1.86
RAB40C-209ENST00000565511 MAFO75444 373 aaPredicted RBP26.65■■□□□ 1.86
RAB40C-209ENST00000565511 SEC24BO95487 1268 aa26.65■■□□□ 1.86
RAB40C-209ENST00000565511 ZSCAN20P17040 1043 aaPredicted RBP26.65■■□□□ 1.86
RAB40C-209ENST00000565511 LAG3P18627 525 aa26.65■■□□□ 1.86
RAB40C-209ENST00000565511 SPIRE1Q08AE8 756 aa26.65■■□□□ 1.86
RAB40C-209ENST00000565511 ADHFE1Q8IWW8 467 aa26.65■■□□□ 1.86
RAB40C-209ENST00000565511 HELQQ8TDG4 1101 aa26.65■■□□□ 1.86
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