RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 ITGB1P05556 798 aa11.27□□□□□ -0.61
CMTM3-209ENST00000565003 CENPBP07199 599 aaPredicted RBP11.27□□□□□ -0.61
CMTM3-209ENST00000565003 DARSP14868 501 aaKnown RBP11.27□□□□□ -0.61
CMTM3-209ENST00000565003 FGFR4P22455 802 aa11.27□□□□□ -0.61
CMTM3-209ENST00000565003 EIF4BP23588 611 aaKnown RBP11.27□□□□□ -0.61
CMTM3-209ENST00000565003 KRT2P35908 639 aa11.27□□□□□ -0.61
CMTM3-209ENST00000565003 FOSBP53539 338 aa11.27□□□□□ -0.61
CMTM3-209ENST00000565003 PSMC5P62195 406 aa11.27□□□□□ -0.61
CMTM3-209ENST00000565003 LEXMQ3ZCV2 418 aa11.27□□□□□ -0.61
CMTM3-209ENST00000565003 PLA2G4FQ68DD2 849 aa11.27□□□□□ -0.61
CMTM3-209ENST00000565003 ANO5Q75V66 913 aa11.27□□□□□ -0.61
CMTM3-209ENST00000565003 KLHL23Q8NBE8 558 aa11.27□□□□□ -0.61
CMTM3-209ENST00000565003 NEK9Q8TD19 979 aa11.27□□□□□ -0.61
CMTM3-209ENST00000565003 NLRP7Q8WX94 980 aa11.27□□□□□ -0.61
CMTM3-209ENST00000565003 P2RX5Q93086 422 aa11.27□□□□□ -0.61
CMTM3-209ENST00000565003 FAM20AQ96MK3 541 aa11.27□□□□□ -0.61
CMTM3-209ENST00000565003 SCLT1Q96NL6 688 aa11.27□□□□□ -0.61
CMTM3-209ENST00000565003 TMEM161AQ9NX61 479 aa11.27□□□□□ -0.61
CMTM3-209ENST00000565003 TBKBP1A7MCY6 615 aa11.26□□□□□ -0.61
CMTM3-209ENST00000565003 DDX11L8A8MPP1 907 aa11.26□□□□□ -0.61
CMTM3-209ENST00000565003 H3BQ06 376 aaPredicted RBP11.26□□□□□ -0.61
CMTM3-209ENST00000565003 TBX3O15119 743 aa11.26□□□□□ -0.61
CMTM3-209ENST00000565003 CSDE1O75534 798 aaKnown RBP11.26□□□□□ -0.61
CMTM3-209ENST00000565003 IL9P15248 144 aa11.26□□□□□ -0.61
CMTM3-209ENST00000565003 GTF2F1P35269 517 aaKnown RBP eCLIP11.26□□□□□ -0.61
CMTM3-209ENST00000565003 IRS1P35568 1242 aa11.26□□□□□ -0.61
CMTM3-209ENST00000565003 QARSP47897 775 aaKnown RBP11.26□□□□□ -0.61
CMTM3-209ENST00000565003 FAM189BP81408 668 aa11.26□□□□□ -0.61
CMTM3-209ENST00000565003 SPIRE1Q08AE8 756 aa11.26□□□□□ -0.61
CMTM3-209ENST00000565003 HYAL1Q12794 435 aa11.26□□□□□ -0.61
CMTM3-209ENST00000565003 NAALADL2Q58DX5 795 aa11.26□□□□□ -0.61
CMTM3-209ENST00000565003 ZNF710Q8N1W2 664 aa11.26□□□□□ -0.61
CMTM3-209ENST00000565003 ZNF579Q8NAF0 562 aaKnown RBP11.26□□□□□ -0.61
CMTM3-209ENST00000565003 SPPL3Q8TCT6 385 aa11.26□□□□□ -0.61
CMTM3-209ENST00000565003 PABPC5Q96DU9 382 aaKnown RBP11.26□□□□□ -0.61
CMTM3-209ENST00000565003 NAP1L4Q99733 375 aaKnown RBP11.26□□□□□ -0.61
CMTM3-209ENST00000565003 ELAC1Q9H777 363 aaKnown RBP11.26□□□□□ -0.61
CMTM3-209ENST00000565003 ATP6V0A4Q9HBG4 840 aa11.26□□□□□ -0.61
CMTM3-209ENST00000565003 CYP26B1Q9NR63 512 aa11.26□□□□□ -0.61
CMTM3-209ENST00000565003 RNF19AQ9NV58 838 aa11.26□□□□□ -0.61
CMTM3-209ENST00000565003 PLXNA4Q9HCM2 1894 aa11.25□□□□□ -0.61
CMTM3-209ENST00000565003 A0A087WZ62 844 aa11.25□□□□□ -0.61
CMTM3-209ENST00000565003 BTBD18B2RXH4 712 aa11.25□□□□□ -0.61
CMTM3-209ENST00000565003 WNT7AO00755 349 aa11.25□□□□□ -0.61
CMTM3-209ENST00000565003 EIF5BO60841 1220 aaKnown RBP11.25□□□□□ -0.61
CMTM3-209ENST00000565003 MAFO75444 373 aaPredicted RBP11.25□□□□□ -0.61
CMTM3-209ENST00000565003 LTBRP36941 435 aa11.25□□□□□ -0.61
CMTM3-209ENST00000565003 NPEPPSP55786 919 aa11.25□□□□□ -0.61
CMTM3-209ENST00000565003 DLX2Q07687 328 aaPredicted RBP11.25□□□□□ -0.61
CMTM3-209ENST00000565003 CTC1Q2NKJ3 1217 aa11.25□□□□□ -0.61
CMTM3-209ENST00000565003 PTCRAQ6ISU1 281 aaPredicted RBP11.25□□□□□ -0.61
CMTM3-209ENST00000565003 EP400NLQ6ZTU2 488 aa11.25□□□□□ -0.61
CMTM3-209ENST00000565003 ADGRD2Q7Z7M1 963 aa11.25□□□□□ -0.61
CMTM3-209ENST00000565003 KSR1Q8IVT5 923 aa11.25□□□□□ -0.61
CMTM3-209ENST00000565003 DIS3L2Q8IYB7 885 aaKnown RBP11.25□□□□□ -0.61
CMTM3-209ENST00000565003 POF1BQ8WVV4 589 aa11.25□□□□□ -0.61
CMTM3-209ENST00000565003 FDXACB1Q9BRP7 624 aaPredicted RBP11.25□□□□□ -0.61
CMTM3-209ENST00000565003 LXNQ9BS40 222 aa11.25□□□□□ -0.61
CMTM3-209ENST00000565003 BRMS1Q9HCU9 246 aa11.25□□□□□ -0.61
CMTM3-209ENST00000565003 CD320Q9NPF0 282 aa11.25□□□□□ -0.61
CMTM3-209ENST00000565003 TYW1Q9NV66 732 aaKnown RBP11.25□□□□□ -0.61
CMTM3-209ENST00000565003 CLDND1Q9NY35 253 aa11.25□□□□□ -0.61
CMTM3-209ENST00000565003 RGL1Q9NZL6 768 aa11.25□□□□□ -0.61
CMTM3-209ENST00000565003 BDP1A6H8Y1 2624 aa11.24□□□□□ -0.61
CMTM3-209ENST00000565003 GRXCR2A6NFK2 248 aa11.24□□□□□ -0.61
CMTM3-209ENST00000565003 LINC01565O15544 149 aa11.24□□□□□ -0.61
CMTM3-209ENST00000565003 MARCH6O60337 910 aa11.24□□□□□ -0.61
CMTM3-209ENST00000565003 TBX10O75333 385 aa11.24□□□□□ -0.61
CMTM3-209ENST00000565003 P4HBP07237 508 aaKnown RBP11.24□□□□□ -0.61
CMTM3-209ENST00000565003 ZSCAN20P17040 1043 aaPredicted RBP11.24□□□□□ -0.61
CMTM3-209ENST00000565003 ATF7P17544 494 aaPredicted RBP11.24□□□□□ -0.61
CMTM3-209ENST00000565003 DNM2P50570 870 aa11.24□□□□□ -0.61
CMTM3-209ENST00000565003 CYP4A11Q02928 519 aa11.24□□□□□ -0.61
CMTM3-209ENST00000565003 CTTNQ14247 550 aaKnown RBP11.24□□□□□ -0.61
CMTM3-209ENST00000565003 EPHA7Q15375 998 aa11.24□□□□□ -0.61
CMTM3-209ENST00000565003 C8orf34Q49A92 452 aa11.24□□□□□ -0.61
CMTM3-209ENST00000565003 CLLU1OSQ5K130 101 aa11.24□□□□□ -0.61
CMTM3-209ENST00000565003 SPOUT1Q5T280 376 aaKnown RBP11.24□□□□□ -0.61
CMTM3-209ENST00000565003 NCAPH2Q6IBW4 605 aa11.24□□□□□ -0.61
CMTM3-209ENST00000565003 LRRC55Q6ZSA7 311 aa11.24□□□□□ -0.61
CMTM3-209ENST00000565003 ZNF410Q86VK4 478 aa11.24□□□□□ -0.61
CMTM3-209ENST00000565003 ECHDC2Q86YB7 292 aa11.24□□□□□ -0.61
CMTM3-209ENST00000565003 RHPN2Q8IUC4 686 aa11.24□□□□□ -0.61
CMTM3-209ENST00000565003 SLFN12Q8IYM2 578 aa11.24□□□□□ -0.61
CMTM3-209ENST00000565003 COLGALT1Q8NBJ5 622 aa11.24□□□□□ -0.61
CMTM3-209ENST00000565003 RNF169Q8NCN4 708 aa11.24□□□□□ -0.61
CMTM3-209ENST00000565003 KHSRPQ92945 711 aaKnown RBP eCLIP11.24□□□□□ -0.61
CMTM3-209ENST00000565003 DYDC2Q96IM9 177 aa11.24□□□□□ -0.61
CMTM3-209ENST00000565003 NLRP4Q96MN2 994 aa11.24□□□□□ -0.61
CMTM3-209ENST00000565003 CASD1Q96PB1 797 aa11.24□□□□□ -0.61
CMTM3-209ENST00000565003 KIF2CQ99661 725 aa11.24□□□□□ -0.61
CMTM3-209ENST00000565003 GCOM2Q9BZD3 368 aaPredicted RBP11.24□□□□□ -0.61
CMTM3-209ENST00000565003 TMEM117Q9H0C3 514 aa11.24□□□□□ -0.61
CMTM3-209ENST00000565003 CWH43Q9H720 699 aa11.24□□□□□ -0.61
CMTM3-209ENST00000565003 BMP2KQ9NSY1 1161 aaPredicted RBP11.24□□□□□ -0.61
CMTM3-209ENST00000565003 RNF216Q9NWF9 866 aaPredicted RBP11.24□□□□□ -0.61
CMTM3-209ENST00000565003 SUCLA2Q9P2R7 463 aaPredicted RBP11.24□□□□□ -0.61
CMTM3-209ENST00000565003 LIMCH1Q9UPQ0 1083 aa11.24□□□□□ -0.61
CMTM3-209ENST00000565003 PCDHGC5Q9Y5F6 944 aa11.24□□□□□ -0.61
CMTM3-209ENST00000565003 A0A0U1RQF3 1178 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms