RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 ANO6Q4KMQ2 910 aa12.29□□□□□ -0.44
SF3B3-205ENST00000564899 CCDC65Q8IXS2 484 aa12.29□□□□□ -0.44
SF3B3-205ENST00000564899 ATP8B4Q8TF62 1192 aa12.29□□□□□ -0.44
SF3B3-205ENST00000564899 DNAJC25Q9H1X3 360 aa12.29□□□□□ -0.44
SF3B3-205ENST00000564899 CYP26B1Q9NR63 512 aa12.29□□□□□ -0.44
SF3B3-205ENST00000564899 ERAP1Q9NZ08 941 aa12.29□□□□□ -0.44
SF3B3-205ENST00000564899 ZNF215Q9UL58 517 aaPredicted RBP12.29□□□□□ -0.44
SF3B3-205ENST00000564899 FRMD3A2A2Y4 597 aa12.28□□□□□ -0.44
SF3B3-205ENST00000564899 FAM13AO94988 1023 aa12.28□□□□□ -0.44
SF3B3-205ENST00000564899 CLTBP09497 229 aa12.28□□□□□ -0.44
SF3B3-205ENST00000564899 BMP6P22004 513 aa12.28□□□□□ -0.44
SF3B3-205ENST00000564899 COASYQ13057 564 aa12.28□□□□□ -0.44
SF3B3-205ENST00000564899 FSCN1Q16658 493 aaKnown RBP12.28□□□□□ -0.44
SF3B3-205ENST00000564899 ZNF658Q5TYW1 1059 aaPredicted RBP12.28□□□□□ -0.44
SF3B3-205ENST00000564899 C1orf53Q5VUE5 145 aa12.28□□□□□ -0.44
SF3B3-205ENST00000564899 C11orf57Q6ZUT1 292 aaPredicted RBP12.28□□□□□ -0.44
SF3B3-205ENST00000564899 C16orf59Q7L2K0 433 aa12.28□□□□□ -0.44
SF3B3-205ENST00000564899 GAS2L3Q86XJ1 694 aa12.28□□□□□ -0.44
SF3B3-205ENST00000564899 BBXQ8WY36 941 aaPredicted RBP12.28□□□□□ -0.44
SF3B3-205ENST00000564899 NECAB3Q96P71 396 aaPredicted RBP12.28□□□□□ -0.44
SF3B3-205ENST00000564899 TIPINQ9BVW5 301 aa12.28□□□□□ -0.44
SF3B3-205ENST00000564899 NIFKQ9BYG3 293 aaKnown RBP12.28□□□□□ -0.44
SF3B3-205ENST00000564899 ZHX3Q9H4I2 956 aa12.28□□□□□ -0.44
SF3B3-205ENST00000564899 ZNF576Q9H609 170 aa12.28□□□□□ -0.44
SF3B3-205ENST00000564899 SPC25Q9HBM1 224 aa12.28□□□□□ -0.44
SF3B3-205ENST00000564899 PANK4Q9NVE7 773 aa12.28□□□□□ -0.44
SF3B3-205ENST00000564899 PHF24Q9UPV7 400 aa12.28□□□□□ -0.44
SF3B3-205ENST00000564899 TRPC6Q9Y210 931 aa12.28□□□□□ -0.44
SF3B3-205ENST00000564899 PPME1Q9Y570 386 aa12.28□□□□□ -0.44
SF3B3-205ENST00000564899 TMEM265A0A087WTH1 108 aa12.27□□□□□ -0.45
SF3B3-205ENST00000564899 A0A1W2PQ45 241 aaPredicted RBP12.27□□□□□ -0.45
SF3B3-205ENST00000564899 A0A1W2PQY0 241 aa12.27□□□□□ -0.45
SF3B3-205ENST00000564899 KIAA0355O15063 1070 aa12.27□□□□□ -0.45
SF3B3-205ENST00000564899 HIP1RO75146 1068 aa12.27□□□□□ -0.45
SF3B3-205ENST00000564899 DGAT1O75907 488 aa12.27□□□□□ -0.45
SF3B3-205ENST00000564899 C6orf222P0C671 652 aaPredicted RBP12.27□□□□□ -0.45
SF3B3-205ENST00000564899 POLGP54098 1239 aaPredicted RBP12.27□□□□□ -0.45
SF3B3-205ENST00000564899 GJA9P57773 515 aa12.27□□□□□ -0.45
SF3B3-205ENST00000564899 BEX3Q00994 111 aa12.27□□□□□ -0.45
SF3B3-205ENST00000564899 FAAP100Q0VG06 881 aa12.27□□□□□ -0.45
SF3B3-205ENST00000564899 GSE1Q14687 1217 aa12.27□□□□□ -0.45
SF3B3-205ENST00000564899 HERC4Q5GLZ8 1057 aaPredicted RBP12.27□□□□□ -0.45
SF3B3-205ENST00000564899 MAEAQ7L5Y9 396 aa12.27□□□□□ -0.45
SF3B3-205ENST00000564899 SMYD4Q8IYR2 804 aaPredicted RBP12.27□□□□□ -0.45
SF3B3-205ENST00000564899 MLKLQ8NB16 471 aa12.27□□□□□ -0.45
SF3B3-205ENST00000564899 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.27□□□□□ -0.45
SF3B3-205ENST00000564899 C16orf70Q9BSU1 422 aa12.27□□□□□ -0.45
SF3B3-205ENST00000564899 GTPBP4Q9BZE4 634 aaKnown RBP12.27□□□□□ -0.45
SF3B3-205ENST00000564899 NAT10Q9H0A0 1025 aaKnown RBP12.27□□□□□ -0.45
SF3B3-205ENST00000564899 UPF3AQ9H1J1 476 aaKnown RBP12.27□□□□□ -0.45
SF3B3-205ENST00000564899 PRDM12Q9H4Q4 367 aa12.27□□□□□ -0.45
SF3B3-205ENST00000564899 ATP6V0A4Q9HBG4 840 aa12.27□□□□□ -0.45
SF3B3-205ENST00000564899 XPNPEP3Q9NQH7 507 aa12.27□□□□□ -0.45
SF3B3-205ENST00000564899 DACH1Q9UI36 760 aa12.27□□□□□ -0.45
SF3B3-205ENST00000564899 ODF2LQ9ULJ1 636 aa12.27□□□□□ -0.45
SF3B3-205ENST00000564899 GDAQ9Y2T3 454 aa12.27□□□□□ -0.45
SF3B3-205ENST00000564899 COL4A3BPQ9Y5P4 624 aa12.27□□□□□ -0.45
SF3B3-205ENST00000564899 SYNRGQ9UMZ2 1314 aa12.27□□□□□ -0.45
SF3B3-205ENST00000564899 MYADML2A6NDP7 307 aa12.26□□□□□ -0.45
SF3B3-205ENST00000564899 RSPH10B2B2RC85 870 aa12.26□□□□□ -0.45
SF3B3-205ENST00000564899 H3BRB1 525 aa12.26□□□□□ -0.45
SF3B3-205ENST00000564899 HBP1O60381 514 aa12.26□□□□□ -0.45
SF3B3-205ENST00000564899 CAVIN2O95810 425 aa12.26□□□□□ -0.45
SF3B3-205ENST00000564899 F2P00734 622 aa12.26□□□□□ -0.45
SF3B3-205ENST00000564899 MYL3P08590 195 aa12.26□□□□□ -0.45
SF3B3-205ENST00000564899 RSPH10BP0C881 870 aa12.26□□□□□ -0.45
SF3B3-205ENST00000564899 RAG1P15918 1043 aa12.26□□□□□ -0.45
SF3B3-205ENST00000564899 GAP43P17677 238 aa12.26□□□□□ -0.45
SF3B3-205ENST00000564899 RFC5P40937 340 aa12.26□□□□□ -0.45
SF3B3-205ENST00000564899 FPGSQ05932 587 aa12.26□□□□□ -0.45
SF3B3-205ENST00000564899 EHHADHQ08426 723 aa12.26□□□□□ -0.45
SF3B3-205ENST00000564899 MAPK7Q13164 816 aa12.26□□□□□ -0.45
SF3B3-205ENST00000564899 EMC2Q15006 297 aa12.26□□□□□ -0.45
SF3B3-205ENST00000564899 TARBP2Q15633 366 aaKnown RBP12.26□□□□□ -0.45
SF3B3-205ENST00000564899 CCDC85BQ15834 202 aaPredicted RBP12.26□□□□□ -0.45
SF3B3-205ENST00000564899 FAM26FQ5R3K3 315 aa12.26□□□□□ -0.45
SF3B3-205ENST00000564899 FAM102BQ5T8I3 360 aa12.26□□□□□ -0.45
SF3B3-205ENST00000564899 SFR1Q86XK3 245 aa12.26□□□□□ -0.45
SF3B3-205ENST00000564899 RNF214Q8ND24 703 aa12.26□□□□□ -0.45
SF3B3-205ENST00000564899 MCPH1Q8NEM0 835 aa12.26□□□□□ -0.45
SF3B3-205ENST00000564899 FAM200AQ8TCP9 573 aa12.26□□□□□ -0.45
SF3B3-205ENST00000564899 ADAMTS19Q8TE59 1207 aa12.26□□□□□ -0.45
SF3B3-205ENST00000564899 SLC7A3Q8WY07 619 aa12.26□□□□□ -0.45
SF3B3-205ENST00000564899 HPS3Q969F9 1004 aa12.26□□□□□ -0.45
SF3B3-205ENST00000564899 TIFAQ96CG3 184 aa12.26□□□□□ -0.45
SF3B3-205ENST00000564899 DRC1Q96MC2 740 aa12.26□□□□□ -0.45
SF3B3-205ENST00000564899 PBX4Q9BYU1 374 aa12.26□□□□□ -0.45
SF3B3-205ENST00000564899 TUT1Q9H6E5 874 aaKnown RBP12.26□□□□□ -0.45
SF3B3-205ENST00000564899 PARVGQ9HBI0 331 aa12.26□□□□□ -0.45
SF3B3-205ENST00000564899 TCF20Q9UGU0 1960 aaKnown RBP12.26□□□□□ -0.45
SF3B3-205ENST00000564899 GBF1Q92538 1859 aa12.25□□□□□ -0.45
SF3B3-205ENST00000564899 GOLGA6L3A6NEY3 463 aa12.25□□□□□ -0.45
SF3B3-205ENST00000564899 SFI1A8K8P3 1242 aa12.25□□□□□ -0.45
SF3B3-205ENST00000564899 ZEB2O60315 1214 aa12.25□□□□□ -0.45
SF3B3-205ENST00000564899 KPNA6O60684 536 aa12.25□□□□□ -0.45
SF3B3-205ENST00000564899 ADAMTS4O75173 837 aa12.25□□□□□ -0.45
SF3B3-205ENST00000564899 PLA2G5P39877 138 aa12.25□□□□□ -0.45
SF3B3-205ENST00000564899 ZNF165P49910 485 aa12.25□□□□□ -0.45
SF3B3-205ENST00000564899 ZNF131P52739 623 aa12.25□□□□□ -0.45
SF3B3-205ENST00000564899 TBC1D8BQ0IIM8 1120 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms