RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 A1CFQ9NQ94 594 aaKnown RBP6.37□□□□□ -1.39
CHD9-210ENST00000564582 DNAI1Q9UI46 699 aa6.37□□□□□ -1.39
CHD9-210ENST00000564582 CFAP45Q9UL16 551 aa6.37□□□□□ -1.39
CHD9-210ENST00000564582 NUB1Q9Y5A7 615 aa6.37□□□□□ -1.39
CHD9-210ENST00000564582 HCFC2Q9Y5Z7 792 aa6.37□□□□□ -1.39
CHD9-210ENST00000564582 LRRFIP2Q9Y608 721 aaKnown RBP6.37□□□□□ -1.39
CHD9-210ENST00000564582 SETBP1Q9Y6X0 1596 aa6.36□□□□□ -1.39
CHD9-210ENST00000564582 TRPM2O94759 1503 aa6.36□□□□□ -1.39
CHD9-210ENST00000564582 DISP1Q96F81 1524 aa6.36□□□□□ -1.39
CHD9-210ENST00000564582 ADGRL3Q9HAR2 1447 aa6.36□□□□□ -1.39
CHD9-210ENST00000564582 RPAP1Q9BWH6 1393 aaPredicted RBP6.36□□□□□ -1.39
CHD9-210ENST00000564582 IRS2Q9Y4H2 1338 aa6.36□□□□□ -1.39
CHD9-210ENST00000564582 CCDC151A5D8V7 595 aa6.36□□□□□ -1.39
CHD9-210ENST00000564582 BECN2A8MW95 431 aa6.36□□□□□ -1.39
CHD9-210ENST00000564582 FAM47E-STBD1D6RA91 191 aa6.36□□□□□ -1.39
CHD9-210ENST00000564582 NPIPB6E9PJ23 425 aa6.36□□□□□ -1.39
CHD9-210ENST00000564582 BUB1BO60566 1050 aaPredicted RBP6.36□□□□□ -1.39
CHD9-210ENST00000564582 ZRANB2O95218 330 aaKnown RBP eCLIP6.36□□□□□ -1.39
CHD9-210ENST00000564582 PNMA6AP0CW24 399 aaPredicted RBP6.36□□□□□ -1.39
CHD9-210ENST00000564582 SKILP12757 684 aa6.36□□□□□ -1.39
CHD9-210ENST00000564582 SDSP20132 328 aa6.36□□□□□ -1.39
CHD9-210ENST00000564582 MTHFSP49914 203 aa6.36□□□□□ -1.39
CHD9-210ENST00000564582 EPHB3P54753 998 aa6.36□□□□□ -1.39
CHD9-210ENST00000564582 SPIRE1Q08AE8 756 aa6.36□□□□□ -1.39
CHD9-210ENST00000564582 STEAP3Q658P3 488 aa6.36□□□□□ -1.39
CHD9-210ENST00000564582 MCTP2Q6DN12 878 aa6.36□□□□□ -1.39
CHD9-210ENST00000564582 CIAPIN1Q6FI81 312 aa6.36□□□□□ -1.39
CHD9-210ENST00000564582 KRBA2Q6ZNG9 492 aa6.36□□□□□ -1.39
CHD9-210ENST00000564582 MMS22LQ6ZRQ5 1243 aa6.36□□□□□ -1.39
CHD9-210ENST00000564582 MILR1Q7Z6M3 343 aa6.36□□□□□ -1.39
CHD9-210ENST00000564582 AMIGO3Q86WK7 504 aa6.36□□□□□ -1.39
CHD9-210ENST00000564582 NLGN1Q8N2Q7 840 aa6.36□□□□□ -1.39
CHD9-210ENST00000564582 LILRB2Q8N423 598 aa6.36□□□□□ -1.39
CHD9-210ENST00000564582 CCDC191Q8NCU4 936 aa6.36□□□□□ -1.39
CHD9-210ENST00000564582 CTCFLQ8NI51 663 aaPredicted RBP6.36□□□□□ -1.39
CHD9-210ENST00000564582 RABGGTAQ92696 567 aa6.36□□□□□ -1.39
CHD9-210ENST00000564582 C16orf45Q96MC5 204 aaPredicted RBP6.36□□□□□ -1.39
CHD9-210ENST00000564582 YIPF4Q9BSR8 244 aa6.36□□□□□ -1.39
CHD9-210ENST00000564582 UBXN6Q9BZV1 441 aa6.36□□□□□ -1.39
CHD9-210ENST00000564582 OSBPL5Q9H0X9 879 aaPredicted RBP6.36□□□□□ -1.39
CHD9-210ENST00000564582 TNMDQ9H2S6 317 aa6.36□□□□□ -1.39
CHD9-210ENST00000564582 ZSCAN16Q9H4T2 348 aaPredicted RBP6.36□□□□□ -1.39
CHD9-210ENST00000564582 ANO10Q9NW15 660 aa6.36□□□□□ -1.39
CHD9-210ENST00000564582 PALD1Q9ULE6 856 aa6.36□□□□□ -1.39
CHD9-210ENST00000564582 PYCARDQ9ULZ3 195 aa6.36□□□□□ -1.39
CHD9-210ENST00000564582 ZNF652Q9Y2D9 606 aa6.36□□□□□ -1.39
CHD9-210ENST00000564582 SIT1Q9Y3P8 196 aa6.36□□□□□ -1.39
CHD9-210ENST00000564582 TRAF6Q9Y4K3 522 aa6.36□□□□□ -1.39
CHD9-210ENST00000564582 ABCA9Q8IUA7 1624 aa6.36□□□□□ -1.39
CHD9-210ENST00000564582 MYO3AQ8NEV4 1616 aa6.36□□□□□ -1.39
CHD9-210ENST00000564582 URB2Q14146 1524 aaKnown RBP6.35□□□□□ -1.39
CHD9-210ENST00000564582 ZFYVE9O95405 1425 aa6.35□□□□□ -1.39
CHD9-210ENST00000564582 PLEKHG2Q9H7P9 1386 aa6.35□□□□□ -1.39
CHD9-210ENST00000564582 EVC2Q86UK5 1308 aa6.35□□□□□ -1.39
CHD9-210ENST00000564582 PES1O00541 588 aaKnown RBP6.35□□□□□ -1.39
CHD9-210ENST00000564582 IRS4O14654 1257 aaPredicted RBP6.35□□□□□ -1.39
CHD9-210ENST00000564582 SOD2P04179 222 aa6.35□□□□□ -1.39
CHD9-210ENST00000564582 GNAT1P11488 350 aa6.35□□□□□ -1.39
CHD9-210ENST00000564582 NEFHP12036 1026 aa6.35□□□□□ -1.39
CHD9-210ENST00000564582 PSMA5P28066 241 aa6.35□□□□□ -1.39
CHD9-210ENST00000564582 MAP2K2P36507 400 aa6.35□□□□□ -1.39
CHD9-210ENST00000564582 NCKAP1LP55160 1127 aa6.35□□□□□ -1.39
CHD9-210ENST00000564582 PAK1Q13153 545 aa6.35□□□□□ -1.39
CHD9-210ENST00000564582 DNAJC21Q5F1R6 531 aaKnown RBP6.35□□□□□ -1.39
CHD9-210ENST00000564582 EMC4Q5J8M3 183 aa6.35□□□□□ -1.39
CHD9-210ENST00000564582 CYP4F22Q6NT55 531 aa6.35□□□□□ -1.39
CHD9-210ENST00000564582 FBXO38Q6PIJ6 1188 aa6.35□□□□□ -1.39
CHD9-210ENST00000564582 TICAM2Q86XR7 235 aa6.35□□□□□ -1.39
CHD9-210ENST00000564582 CCDC50Q8IVM0 306 aa6.35□□□□□ -1.39
CHD9-210ENST00000564582 IGDCC3Q8IVU1 814 aa6.35□□□□□ -1.39
CHD9-210ENST00000564582 TMEM151BQ8IW70 566 aa6.35□□□□□ -1.39
CHD9-210ENST00000564582 CCAR2Q8N163 923 aaKnown RBP6.35□□□□□ -1.39
CHD9-210ENST00000564582 ZGPATQ8N5A5 531 aaKnown RBP6.35□□□□□ -1.39
CHD9-210ENST00000564582 ANKRD20A12PQ8NF67 263 aa6.35□□□□□ -1.39
CHD9-210ENST00000564582 PHOSPHO1Q8TCT1 267 aa6.35□□□□□ -1.39
CHD9-210ENST00000564582 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.35□□□□□ -1.39
CHD9-210ENST00000564582 CPA5Q8WXQ8 436 aa6.35□□□□□ -1.39
CHD9-210ENST00000564582 BPIFA3Q9BQP9 254 aa6.35□□□□□ -1.39
CHD9-210ENST00000564582 ALDH8A1Q9H2A2 487 aaPredicted RBP6.35□□□□□ -1.39
CHD9-210ENST00000564582 NGRNQ9NPE2 291 aaKnown RBP6.35□□□□□ -1.39
CHD9-210ENST00000564582 SFMBT1Q9UHJ3 866 aa6.35□□□□□ -1.39
CHD9-210ENST00000564582 ZNF215Q9UL58 517 aaPredicted RBP6.35□□□□□ -1.39
CHD9-210ENST00000564582 RRP15Q9Y3B9 282 aaKnown RBP6.35□□□□□ -1.39
CHD9-210ENST00000564582 KCTD3Q9Y597 815 aa6.35□□□□□ -1.39
CHD9-210ENST00000564582 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.35□□□□□ -1.39
CHD9-210ENST00000564582 CDC42BPAQ5VT25 1732 aa6.35□□□□□ -1.39
CHD9-210ENST00000564582 ERVK-7P63135 1459 aa6.34□□□□□ -1.39
CHD9-210ENST00000564582 SPHKAPQ2M3C7 1700 aa6.34□□□□□ -1.39
CHD9-210ENST00000564582 ATXN2Q99700 1313 aaKnown RBP6.34□□□□□ -1.39
CHD9-210ENST00000564582 MYOM1P52179 1685 aa6.34□□□□□ -1.39
CHD9-210ENST00000564582 ERICH4A6NGS2 130 aa6.34□□□□□ -1.39
CHD9-210ENST00000564582 HIP1O00291 1037 aa6.34□□□□□ -1.39
CHD9-210ENST00000564582 PPP1R12AO14974 1030 aaPredicted RBP6.34□□□□□ -1.39
CHD9-210ENST00000564582 NUAK1O60285 661 aa6.34□□□□□ -1.39
CHD9-210ENST00000564582 SMC2O95347 1197 aa6.34□□□□□ -1.39
CHD9-210ENST00000564582 ASGR2P07307 311 aa6.34□□□□□ -1.39
CHD9-210ENST00000564582 HMGB1P09429 215 aaKnown RBP6.34□□□□□ -1.39
CHD9-210ENST00000564582 C6orf222P0C671 652 aaPredicted RBP6.34□□□□□ -1.39
CHD9-210ENST00000564582 ZNF853P0CG23 659 aa6.34□□□□□ -1.39
CHD9-210ENST00000564582 GSPT1P15170 499 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms