RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 GCOM2Q9BZD3 368 aaPredicted RBP18.55■□□□□ 0.56
RNF40-206ENST00000564260 ADAMTS10Q9H324 1103 aa18.55■□□□□ 0.56
RNF40-206ENST00000564260 CUEDC2Q9H467 287 aa18.55■□□□□ 0.56
RNF40-206ENST00000564260 C17orf75Q9HAS0 396 aa18.55■□□□□ 0.56
RNF40-206ENST00000564260 COL4A3BPQ9Y5P4 624 aa18.55■□□□□ 0.56
RNF40-206ENST00000564260 LOXHD1Q8IVV2 1947 aa18.55■□□□□ 0.56
RNF40-206ENST00000564260 RANBP2P49792 3224 aaKnown RBP18.54■□□□□ 0.56
RNF40-206ENST00000564260 ZBTB39O15060 712 aa18.54■□□□□ 0.56
RNF40-206ENST00000564260 SCP2P22307 547 aa18.54■□□□□ 0.56
RNF40-206ENST00000564260 GUCY2CP25092 1073 aa18.54■□□□□ 0.56
RNF40-206ENST00000564260 ARL2P36404 184 aa18.54■□□□□ 0.56
RNF40-206ENST00000564260 ME1P48163 572 aa18.54■□□□□ 0.56
RNF40-206ENST00000564260 NLRP11P59045 1033 aaKnown RBP18.54■□□□□ 0.56
RNF40-206ENST00000564260 LPIN1Q14693 890 aa18.54■□□□□ 0.56
RNF40-206ENST00000564260 ZNF365Q70YC5 407 aa18.54■□□□□ 0.56
RNF40-206ENST00000564260 IFNLR1Q8IU57 520 aaPredicted RBP18.54■□□□□ 0.56
RNF40-206ENST00000564260 PNMA5Q96PV4 448 aa18.54■□□□□ 0.56
RNF40-206ENST00000564260 XPNPEP1Q9NQW7 623 aa18.54■□□□□ 0.56
RNF40-206ENST00000564260 CHMP5Q9NZZ3 219 aa18.54■□□□□ 0.56
RNF40-206ENST00000564260 TRIP12Q14669 1992 aaPredicted RBP18.53■□□□□ 0.56
RNF40-206ENST00000564260 USO1O60763 962 aaKnown RBP18.53■□□□□ 0.56
RNF40-206ENST00000564260 VTNP04004 478 aa18.53■□□□□ 0.56
RNF40-206ENST00000564260 DARSP14868 501 aaKnown RBP18.53■□□□□ 0.56
RNF40-206ENST00000564260 EPHB4P54760 987 aa18.53■□□□□ 0.56
RNF40-206ENST00000564260 GRIN1Q05586 938 aa18.53■□□□□ 0.56
RNF40-206ENST00000564260 PAK2Q13177 524 aa18.53■□□□□ 0.56
RNF40-206ENST00000564260 PPP2R5AQ15172 486 aa18.53■□□□□ 0.56
RNF40-206ENST00000564260 KIZQ2M2Z5 673 aa18.53■□□□□ 0.56
RNF40-206ENST00000564260 AXDND1Q5T1B0 1012 aaPredicted RBP18.53■□□□□ 0.56
RNF40-206ENST00000564260 ADALQ6DHV7 355 aa18.53■□□□□ 0.56
RNF40-206ENST00000564260 SRGAP1Q7Z6B7 1085 aa18.53■□□□□ 0.56
RNF40-206ENST00000564260 DEFB128Q7Z7B8 93 aa18.53■□□□□ 0.56
RNF40-206ENST00000564260 LEO1Q8WVC0 666 aaPredicted RBP18.53■□□□□ 0.56
RNF40-206ENST00000564260 PRPF31Q8WWY3 499 aaKnown RBP18.53■□□□□ 0.56
RNF40-206ENST00000564260 ZBTB10Q96DT7 871 aa18.53■□□□□ 0.56
RNF40-206ENST00000564260 SPATA32Q96LK8 384 aa18.53■□□□□ 0.56
RNF40-206ENST00000564260 RNPC3Q96LT9 517 aaKnown RBP18.53■□□□□ 0.56
RNF40-206ENST00000564260 DRC1Q96MC2 740 aa18.53■□□□□ 0.56
RNF40-206ENST00000564260 SLC9A7Q96T83 725 aa18.53■□□□□ 0.56
RNF40-206ENST00000564260 SH2D3AQ9BRG2 576 aa18.53■□□□□ 0.56
RNF40-206ENST00000564260 MAGEF1Q9HAY2 307 aa18.53■□□□□ 0.56
RNF40-206ENST00000564260 COLQQ9Y215 455 aaPredicted RBP18.53■□□□□ 0.56
RNF40-206ENST00000564260 RPS6KA5O75582 802 aa18.52■□□□□ 0.56
RNF40-206ENST00000564260 PLA2G4BP0C869 781 aa18.52■□□□□ 0.56
RNF40-206ENST00000564260 GHRP10912 638 aa18.52■□□□□ 0.56
RNF40-206ENST00000564260 PLCG1P19174 1290 aa18.52■□□□□ 0.56
RNF40-206ENST00000564260 SFPQP23246 707 aaKnown RBP eCLIP18.52■□□□□ 0.56
RNF40-206ENST00000564260 SLC12A3P55017 1021 aa18.52■□□□□ 0.56
RNF40-206ENST00000564260 LAMTOR4Q0VGL1 99 aa18.52■□□□□ 0.56
RNF40-206ENST00000564260 CSPP1Q1MSJ5 1256 aa18.52■□□□□ 0.56
RNF40-206ENST00000564260 RHPN2Q8IUC4 686 aa18.52■□□□□ 0.56
RNF40-206ENST00000564260 DBF4BQ8NFT6 615 aa18.52■□□□□ 0.56
RNF40-206ENST00000564260 NLRP7Q8WX94 980 aa18.52■□□□□ 0.56
RNF40-206ENST00000564260 LARP4BQ92615 738 aaKnown RBP18.52■□□□□ 0.56
RNF40-206ENST00000564260 EPSTI1Q96J88 318 aa18.52■□□□□ 0.56
RNF40-206ENST00000564260 CLIC6Q96NY7 704 aa18.52■□□□□ 0.56
RNF40-206ENST00000564260 LRRC27Q9C0I9 530 aa18.52■□□□□ 0.56
RNF40-206ENST00000564260 FAM13BQ9NYF5 915 aa18.52■□□□□ 0.56
RNF40-206ENST00000564260 RBM19Q9Y4C8 960 aaKnown RBP18.52■□□□□ 0.56
RNF40-206ENST00000564260 E9PMD0 336 aa18.51■□□□□ 0.55
RNF40-206ENST00000564260 ACRP10323 421 aa18.51■□□□□ 0.55
RNF40-206ENST00000564260 NCLP19338 710 aaKnown RBP18.51■□□□□ 0.55
RNF40-206ENST00000564260 ABCD1P33897 745 aa18.51■□□□□ 0.55
RNF40-206ENST00000564260 PHKA2P46019 1235 aa18.51■□□□□ 0.55
RNF40-206ENST00000564260 TMEM62Q0P6H9 643 aa18.51■□□□□ 0.55
RNF40-206ENST00000564260 DRP2Q13474 957 aa18.51■□□□□ 0.55
RNF40-206ENST00000564260 KARSQ15046 597 aaKnown RBP18.51■□□□□ 0.55
RNF40-206ENST00000564260 SHHQ15465 462 aa18.51■□□□□ 0.55
RNF40-206ENST00000564260 ZRSR1Q15695 479 aaKnown RBP18.51■□□□□ 0.55
RNF40-206ENST00000564260 RRAGBQ5VZM2 374 aa18.51■□□□□ 0.55
RNF40-206ENST00000564260 RINT1Q6NUQ1 792 aa18.51■□□□□ 0.55
RNF40-206ENST00000564260 C1orf186Q6ZWK4 172 aa18.51■□□□□ 0.55
RNF40-206ENST00000564260 RAD54LQ92698 747 aa18.51■□□□□ 0.55
RNF40-206ENST00000564260 TMEM143Q96AN5 459 aa18.51■□□□□ 0.55
RNF40-206ENST00000564260 SCLT1Q96NL6 688 aa18.51■□□□□ 0.55
RNF40-206ENST00000564260 OSMRQ99650 979 aa18.51■□□□□ 0.55
RNF40-206ENST00000564260 C2orf40Q9H1Z8 148 aa18.51■□□□□ 0.55
RNF40-206ENST00000564260 CHST12Q9NRB3 414 aa18.51■□□□□ 0.55
RNF40-206ENST00000564260 ODF2LQ9ULJ1 636 aa18.51■□□□□ 0.55
RNF40-206ENST00000564260 PADI3Q9ULW8 664 aa18.51■□□□□ 0.55
RNF40-206ENST00000564260 PCDHA7Q9UN72 937 aa18.51■□□□□ 0.55
RNF40-206ENST00000564260 ARID2Q68CP9 1835 aa18.51■□□□□ 0.55
RNF40-206ENST00000564260 A0A1W2PQ27 194 aa18.5■□□□□ 0.55
RNF40-206ENST00000564260 A0A1W2PQ64 194 aa18.5■□□□□ 0.55
RNF40-206ENST00000564260 A0A1W2PQD8 194 aa18.5■□□□□ 0.55
RNF40-206ENST00000564260 CMA1P23946 247 aa18.5■□□□□ 0.55
RNF40-206ENST00000564260 NAMPTP43490 491 aa18.5■□□□□ 0.55
RNF40-206ENST00000564260 KCNJ6P48051 423 aa18.5■□□□□ 0.55
RNF40-206ENST00000564260 PTENP60484 403 aa18.5■□□□□ 0.55
RNF40-206ENST00000564260 FOXD4L6Q3SYB3 417 aaPredicted RBP18.5■□□□□ 0.55
RNF40-206ENST00000564260 RESP18Q5W5W9 173 aa18.5■□□□□ 0.55
RNF40-206ENST00000564260 FOXD4L3Q6VB84 417 aaPredicted RBP18.5■□□□□ 0.55
RNF40-206ENST00000564260 KCNK18Q7Z418 384 aa18.5■□□□□ 0.55
RNF40-206ENST00000564260 IQUBQ8NA54 791 aa18.5■□□□□ 0.55
RNF40-206ENST00000564260 RSPH1Q8WYR4 309 aa18.5■□□□□ 0.55
RNF40-206ENST00000564260 KCNN1Q92952 543 aa18.5■□□□□ 0.55
RNF40-206ENST00000564260 IFT74Q96LB3 600 aa18.5■□□□□ 0.55
RNF40-206ENST00000564260 IPO9Q96P70 1041 aaKnown RBP18.5■□□□□ 0.55
RNF40-206ENST00000564260 POLR3FQ9H1D9 316 aaPredicted RBP18.5■□□□□ 0.55
RNF40-206ENST00000564260 IFT122Q9HBG6 1241 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms