RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 CDY2AQ9Y6F7 541 aa3.29□□□□□ -1.88
CHD9-209ENST00000564255 A0A1W2PQJ5 194 aa3.29□□□□□ -1.88
CHD9-209ENST00000564255 KIAA1324LA8MWY0 1029 aaPredicted RBP3.29□□□□□ -1.88
CHD9-209ENST00000564255 H3BML4 177 aa3.29□□□□□ -1.88
CHD9-209ENST00000564255 TPP1O14773 563 aa3.29□□□□□ -1.88
CHD9-209ENST00000564255 CREB3O43889 395 aa3.29□□□□□ -1.88
CHD9-209ENST00000564255 MED26O95402 600 aa3.29□□□□□ -1.88
CHD9-209ENST00000564255 IFIT2P09913 472 aaKnown RBP3.29□□□□□ -1.88
CHD9-209ENST00000564255 MC4RP32245 332 aa3.29□□□□□ -1.88
CHD9-209ENST00000564255 BCAR1P56945 870 aa3.29□□□□□ -1.88
CHD9-209ENST00000564255 ROM1Q03395 351 aa3.29□□□□□ -1.88
CHD9-209ENST00000564255 PPP1R35Q8TAP8 253 aa3.29□□□□□ -1.88
CHD9-209ENST00000564255 ERCC4Q92889 916 aaPredicted RBP3.29□□□□□ -1.88
CHD9-209ENST00000564255 MAP3K14Q99558 947 aa3.29□□□□□ -1.88
CHD9-209ENST00000564255 PAK6Q9NQU5 681 aaPredicted RBP3.29□□□□□ -1.88
CHD9-209ENST00000564255 PRDM7Q9NQW5 492 aa3.29□□□□□ -1.88
CHD9-209ENST00000564255 SCOCQ9UIL1 159 aa3.29□□□□□ -1.88
CHD9-209ENST00000564255 CTNND2Q9UQB3 1225 aa3.29□□□□□ -1.88
CHD9-209ENST00000564255 IPPQ9Y573 584 aa3.29□□□□□ -1.88
CHD9-209ENST00000564255 PMM2O15305 246 aa3.28□□□□□ -1.88
CHD9-209ENST00000564255 HTRA2O43464 458 aaPredicted RBP3.28□□□□□ -1.88
CHD9-209ENST00000564255 CELA3BP08861 270 aa3.28□□□□□ -1.88
CHD9-209ENST00000564255 SLC5A1P13866 664 aa3.28□□□□□ -1.88
CHD9-209ENST00000564255 PTGS1P23219 599 aa3.28□□□□□ -1.88
CHD9-209ENST00000564255 ARL4AP40617 200 aa3.28□□□□□ -1.88
CHD9-209ENST00000564255 GPR15P49685 360 aa3.28□□□□□ -1.88
CHD9-209ENST00000564255 SLC16A1P53985 500 aa3.28□□□□□ -1.88
CHD9-209ENST00000564255 SAFB2Q14151 953 aaKnown RBP eCLIP3.28□□□□□ -1.88
CHD9-209ENST00000564255 SLFN12LQ6IEE8 588 aa3.28□□□□□ -1.88
CHD9-209ENST00000564255 UNQ6494/PRO21346Q6UXR6 183 aa3.28□□□□□ -1.88
CHD9-209ENST00000564255 MORC1Q86VD1 984 aa3.28□□□□□ -1.88
CHD9-209ENST00000564255 FATE1Q969F0 183 aa3.28□□□□□ -1.88
CHD9-209ENST00000564255 TOE1Q96GM8 510 aaKnown RBP3.28□□□□□ -1.88
CHD9-209ENST00000564255 NAA15Q9BXJ9 866 aaKnown RBP3.28□□□□□ -1.88
CHD9-209ENST00000564255 ACE2Q9BYF1 805 aaPredicted RBP3.28□□□□□ -1.88
CHD9-209ENST00000564255 GPR160Q9UJ42 338 aa3.28□□□□□ -1.88
CHD9-209ENST00000564255 A0A0A6YYJ9 748 aa3.28□□□□□ -1.88
CHD9-209ENST00000564255 F8W031 263 aaPredicted RBP3.28□□□□□ -1.88
CHD9-209ENST00000564255 MSTNO14793 375 aa3.28□□□□□ -1.88
CHD9-209ENST00000564255 B3GALT2O43825 422 aa3.28□□□□□ -1.88
CHD9-209ENST00000564255 UBXN7O94888 489 aa3.28□□□□□ -1.88
CHD9-209ENST00000564255 ALDH5A1P51649 535 aaPredicted RBP3.28□□□□□ -1.88
CHD9-209ENST00000564255 AGFG1P52594 562 aaKnown RBP3.28□□□□□ -1.88
CHD9-209ENST00000564255 DHX8Q14562 1220 aaKnown RBP3.28□□□□□ -1.88
CHD9-209ENST00000564255 KRT72Q14CN4 511 aa3.28□□□□□ -1.88
CHD9-209ENST00000564255 CCDC178Q5BJE1 867 aa3.28□□□□□ -1.88
CHD9-209ENST00000564255 PRAMEF9Q5VWM5 478 aa3.28□□□□□ -1.88
CHD9-209ENST00000564255 CD276Q5ZPR3 534 aa3.28□□□□□ -1.88
CHD9-209ENST00000564255 DENND1CQ8IV53 801 aa3.28□□□□□ -1.88
CHD9-209ENST00000564255 FLCNQ8NFG4 579 aa3.28□□□□□ -1.88
CHD9-209ENST00000564255 NRG4Q8WWG1 115 aa3.28□□□□□ -1.88
CHD9-209ENST00000564255 SLC2A13Q96QE2 648 aa3.28□□□□□ -1.88
CHD9-209ENST00000564255 FAM204AQ9H8W3 233 aa3.28□□□□□ -1.88
CHD9-209ENST00000564255 RXFP1Q9HBX9 757 aa3.28□□□□□ -1.88
CHD9-209ENST00000564255 MBNL3Q9NUK0 354 aaKnown RBP3.28□□□□□ -1.88
CHD9-209ENST00000564255 DPP7Q9UHL4 492 aa3.28□□□□□ -1.88
CHD9-209ENST00000564255 FAM50BQ9Y247 325 aa3.28□□□□□ -1.88
CHD9-209ENST00000564255 ST20-MTHFSA0A0A6YYL1 179 aa3.27□□□□□ -1.89
CHD9-209ENST00000564255 KLRG2A4D1S0 409 aaPredicted RBP3.27□□□□□ -1.89
CHD9-209ENST00000564255 ZNF839A8K0R7 811 aa3.27□□□□□ -1.89
CHD9-209ENST00000564255 ENO2P09104 434 aaPredicted RBP3.27□□□□□ -1.89
CHD9-209ENST00000564255 TRHRP34981 398 aaPredicted RBP3.27□□□□□ -1.89
CHD9-209ENST00000564255 MAPKAPK2P49137 400 aa3.27□□□□□ -1.89
CHD9-209ENST00000564255 RGS3P49796 1198 aa3.27□□□□□ -1.89
CHD9-209ENST00000564255 FAM193AP78312 1265 aa3.27□□□□□ -1.89
CHD9-209ENST00000564255 STILQ15468 1287 aa3.27□□□□□ -1.89
CHD9-209ENST00000564255 UAP1L1Q3KQV9 507 aa3.27□□□□□ -1.89
CHD9-209ENST00000564255 PRSS36Q5K4E3 855 aa3.27□□□□□ -1.89
CHD9-209ENST00000564255 TEPPQ6URK8 271 aa3.27□□□□□ -1.89
CHD9-209ENST00000564255 RPTNQ6XPR3 784 aa3.27□□□□□ -1.89
CHD9-209ENST00000564255 GRAMD1CQ8IYS0 662 aa3.27□□□□□ -1.89
CHD9-209ENST00000564255 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.27□□□□□ -1.89
CHD9-209ENST00000564255 OR14C36Q8NHC7 312 aa3.27□□□□□ -1.89
CHD9-209ENST00000564255 HAPLN2Q9GZV7 340 aa3.27□□□□□ -1.89
CHD9-209ENST00000564255 C19orf44Q9H6X5 657 aa3.27□□□□□ -1.89
CHD9-209ENST00000564255 LIMCH1Q9UPQ0 1083 aa3.27□□□□□ -1.89
CHD9-209ENST00000564255 YBX2Q9Y2T7 364 aaKnown RBP3.27□□□□□ -1.89
CHD9-209ENST00000564255 FAM227AF5H4B4 570 aa3.27□□□□□ -1.89
CHD9-209ENST00000564255 OPHN1O60890 802 aa3.27□□□□□ -1.89
CHD9-209ENST00000564255 ECE1P42892 770 aa3.27□□□□□ -1.89
CHD9-209ENST00000564255 NFATC3Q12968 1075 aa3.27□□□□□ -1.89
CHD9-209ENST00000564255 SEMA5AQ13591 1074 aa3.27□□□□□ -1.89
CHD9-209ENST00000564255 SPIDRQ14159 915 aa3.27□□□□□ -1.89
CHD9-209ENST00000564255 NOLC1Q14978 699 aaKnown RBP eCLIP3.27□□□□□ -1.89
CHD9-209ENST00000564255 ADRM1Q16186 407 aa3.27□□□□□ -1.89
CHD9-209ENST00000564255 CR1LQ2VPA4 569 aa3.27□□□□□ -1.89
CHD9-209ENST00000564255 LRSAM1Q6UWE0 723 aa3.27□□□□□ -1.89
CHD9-209ENST00000564255 FAM156AQ8NDB6 213 aa3.27□□□□□ -1.89
CHD9-209ENST00000564255 PPP1R14CQ8TAE6 165 aa3.27□□□□□ -1.89
CHD9-209ENST00000564255 CALML6Q8TD86 181 aa3.27□□□□□ -1.89
CHD9-209ENST00000564255 MYLIPQ8WY64 445 aa3.27□□□□□ -1.89
CHD9-209ENST00000564255 RPGRQ92834 1020 aaKnown RBP3.27□□□□□ -1.89
CHD9-209ENST00000564255 LRFN3Q9BTN0 628 aa3.27□□□□□ -1.89
CHD9-209ENST00000564255 KRTAP4-7Q9BYR0 210 aa3.27□□□□□ -1.89
CHD9-209ENST00000564255 UCKL1Q9NWZ5 548 aa3.27□□□□□ -1.89
CHD9-209ENST00000564255 GALNT8Q9NY28 637 aa3.27□□□□□ -1.89
CHD9-209ENST00000564255 KLHL14Q9P2G3 628 aa3.27□□□□□ -1.89
CHD9-209ENST00000564255 FTSJ1Q9UET6 329 aa3.27□□□□□ -1.89
CHD9-209ENST00000564255 L1RE1Q9UN81 338 aa3.27□□□□□ -1.89
CHD9-209ENST00000564255 CCDC154A6NI56 674 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms