RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 MTRQ99707 1265 aa18.8■□□□□ 0.6
CMTM3-208ENST00000564247 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.8■□□□□ 0.61e-6■□□□□ 8.5
CMTM3-208ENST00000564247 TRIM9Q9C026 710 aa18.8■□□□□ 0.6
CMTM3-208ENST00000564247 GZF1Q9H116 711 aaPredicted RBP18.8■□□□□ 0.6
CMTM3-208ENST00000564247 RNPEPQ9H4A4 650 aa18.8■□□□□ 0.6
CMTM3-208ENST00000564247 IL23AQ9NPF7 189 aa18.8■□□□□ 0.6
CMTM3-208ENST00000564247 GTF2IRD1Q9UHL9 959 aa18.8■□□□□ 0.6
CMTM3-208ENST00000564247 TRIP12Q14669 1992 aaPredicted RBP18.79■□□□□ 0.6
CMTM3-208ENST00000564247 PITPNM1O00562 1244 aa18.79■□□□□ 0.6
CMTM3-208ENST00000564247 DGAT1O75907 488 aa18.79■□□□□ 0.6
CMTM3-208ENST00000564247 PRR29P0C7W0 189 aa18.79■□□□□ 0.6
CMTM3-208ENST00000564247 RFC5P40937 340 aa18.79■□□□□ 0.6
CMTM3-208ENST00000564247 CCL23P55773 120 aa18.79■□□□□ 0.6
CMTM3-208ENST00000564247 ASIC1P78348 528 aa18.79■□□□□ 0.6
CMTM3-208ENST00000564247 DPYDQ12882 1025 aa18.79■□□□□ 0.6
CMTM3-208ENST00000564247 TMEM240Q5SV17 173 aa18.79■□□□□ 0.6
CMTM3-208ENST00000564247 GDF6Q6KF10 455 aaPredicted RBP18.79■□□□□ 0.6
CMTM3-208ENST00000564247 CNNM4Q6P4Q7 775 aa18.79■□□□□ 0.6
CMTM3-208ENST00000564247 PSRC1Q6PGN9 363 aaPredicted RBP18.79■□□□□ 0.6
CMTM3-208ENST00000564247 SASS6Q6UVJ0 657 aa18.79■□□□□ 0.6
CMTM3-208ENST00000564247 C1orf186Q6ZWK4 172 aa18.79■□□□□ 0.6
CMTM3-208ENST00000564247 CCDC65Q8IXS2 484 aa18.79■□□□□ 0.6
CMTM3-208ENST00000564247 JPH2Q9BR39 696 aaPredicted RBP18.79■□□□□ 0.6
CMTM3-208ENST00000564247 TIPINQ9BVW5 301 aa18.79■□□□□ 0.6
CMTM3-208ENST00000564247 RMND1Q9NWS8 449 aa18.79■□□□□ 0.6
CMTM3-208ENST00000564247 HDAC6Q9UBN7 1215 aa18.79■□□□□ 0.6
CMTM3-208ENST00000564247 NOD1Q9Y239 953 aa18.79■□□□□ 0.6
CMTM3-208ENST00000564247 PCDHA5Q9Y5H7 936 aa18.79■□□□□ 0.6
CMTM3-208ENST00000564247 TANC1Q9C0D5 1861 aa18.78■□□□□ 0.6
CMTM3-208ENST00000564247 PVALEFA0A1B0GWK0 134 aa18.78■□□□□ 0.6
CMTM3-208ENST00000564247 TMEM150BA6NC51 233 aa18.78■□□□□ 0.6
CMTM3-208ENST00000564247 RRN3P2A6NIE6 340 aa18.78■□□□□ 0.6
CMTM3-208ENST00000564247 ACRP10323 421 aa18.78■□□□□ 0.6
CMTM3-208ENST00000564247 IDEP14735 1019 aa18.78■□□□□ 0.6
CMTM3-208ENST00000564247 GUCY2CP25092 1073 aa18.78■□□□□ 0.6
CMTM3-208ENST00000564247 POLGP54098 1239 aaPredicted RBP18.78■□□□□ 0.6
CMTM3-208ENST00000564247 ZSCAN23Q3MJ62 389 aa18.78■□□□□ 0.6
CMTM3-208ENST00000564247 ARSHQ5FYA8 562 aa18.78■□□□□ 0.6
CMTM3-208ENST00000564247 RBM43Q6ZSC3 357 aaKnown RBP18.78■□□□□ 0.6
CMTM3-208ENST00000564247 SLC7A3Q8WY07 619 aa18.78■□□□□ 0.6
CMTM3-208ENST00000564247 GSDMAQ96QA5 445 aa18.78■□□□□ 0.6
CMTM3-208ENST00000564247 CTAGE1Q96RT6 745 aa18.78■□□□□ 0.6
CMTM3-208ENST00000564247 SH2D3AQ9BRG2 576 aa18.78■□□□□ 0.6
CMTM3-208ENST00000564247 RUSC1Q9BVN2 902 aa18.78■□□□□ 0.6
CMTM3-208ENST00000564247 COL1A2P08123 1366 aa18.78■□□□□ 0.6
CMTM3-208ENST00000564247 USO1O60763 962 aaKnown RBP18.77■□□□□ 0.6
CMTM3-208ENST00000564247 TBCAO75347 108 aaKnown RBP18.77■□□□□ 0.6
CMTM3-208ENST00000564247 RPN1P04843 607 aaKnown RBP18.77■□□□□ 0.6
CMTM3-208ENST00000564247 INSRRP14616 1297 aa18.77■□□□□ 0.6
CMTM3-208ENST00000564247 CASP1P29466 404 aa18.77■□□□□ 0.6
CMTM3-208ENST00000564247 SMAD3P84022 425 aaKnown RBP18.77■□□□□ 0.6
CMTM3-208ENST00000564247 TBC1D8BQ0IIM8 1120 aa18.77■□□□□ 0.6
CMTM3-208ENST00000564247 PPFIA1Q13136 1202 aa18.77■□□□□ 0.6
CMTM3-208ENST00000564247 BFSP2Q13515 415 aa18.77■□□□□ 0.6
CMTM3-208ENST00000564247 GIT2Q14161 759 aa18.77■□□□□ 0.6
CMTM3-208ENST00000564247 TARBP2Q15633 366 aaKnown RBP18.77■□□□□ 0.6
CMTM3-208ENST00000564247 UNC13DQ70J99 1090 aa18.77■□□□□ 0.6
CMTM3-208ENST00000564247 ZNF365Q70YC5 407 aa18.77■□□□□ 0.6
CMTM3-208ENST00000564247 RPUSD2Q8IZ73 545 aaKnown RBP18.77■□□□□ 0.6
CMTM3-208ENST00000564247 MCPH1Q8NEM0 835 aa18.77■□□□□ 0.6
CMTM3-208ENST00000564247 ERCC4Q92889 916 aaPredicted RBP18.77■□□□□ 0.6
CMTM3-208ENST00000564247 GTPBP4Q9BZE4 634 aaKnown RBP18.77■□□□□ 0.6
CMTM3-208ENST00000564247 ZHX3Q9H4I2 956 aa18.77■□□□□ 0.6
CMTM3-208ENST00000564247 ATP6V0A4Q9HBG4 840 aa18.77■□□□□ 0.6
CMTM3-208ENST00000564247 PANK4Q9NVE7 773 aa18.77■□□□□ 0.6
CMTM3-208ENST00000564247 TUBE1Q9UJT0 475 aa18.77■□□□□ 0.6
CMTM3-208ENST00000564247 SCN5AQ14524 2016 aa18.77■□□□□ 0.6
CMTM3-208ENST00000564247 NPHP3-ACAD11A0A0J9YXS1 232 aa18.76■□□□□ 0.59
CMTM3-208ENST00000564247 SYCE3A1L190 88 aa18.76■□□□□ 0.59
CMTM3-208ENST00000564247 MAGEB2O15479 319 aa18.76■□□□□ 0.59
CMTM3-208ENST00000564247 FAM13AO94988 1023 aa18.76■□□□□ 0.59
CMTM3-208ENST00000564247 GNAT1P11488 350 aa18.76■□□□□ 0.59
CMTM3-208ENST00000564247 IGBP1P78318 339 aa18.76■□□□□ 0.59
CMTM3-208ENST00000564247 RAD51AP2Q09MP3 1159 aa18.76■□□□□ 0.59
CMTM3-208ENST00000564247 NT5DC1Q5TFE4 455 aa18.76■□□□□ 0.59
CMTM3-208ENST00000564247 RASIP1Q5U651 963 aa18.76■□□□□ 0.59
CMTM3-208ENST00000564247 FAM109BQ6ICB4 259 aaPredicted RBP18.76■□□□□ 0.59
CMTM3-208ENST00000564247 CCDC155Q8N6L0 562 aa18.76■□□□□ 0.59
CMTM3-208ENST00000564247 RETREG2Q8NC44 543 aa18.76■□□□□ 0.59
CMTM3-208ENST00000564247 SPATA20Q8TB22 786 aa18.76■□□□□ 0.59
CMTM3-208ENST00000564247 CAGE1Q8TC20 777 aa18.76■□□□□ 0.59
CMTM3-208ENST00000564247 DNAJC19Q96DA6 116 aa18.76■□□□□ 0.59
CMTM3-208ENST00000564247 SCLYQ96I15 445 aa18.76■□□□□ 0.59
CMTM3-208ENST00000564247 EXOC1Q9NV70 894 aa18.76■□□□□ 0.59
CMTM3-208ENST00000564247 KCNG1Q9UIX4 513 aa18.76■□□□□ 0.59
CMTM3-208ENST00000564247 ODF2LQ9ULJ1 636 aa18.76■□□□□ 0.59
CMTM3-208ENST00000564247 COL4A3BPQ9Y5P4 624 aa18.76■□□□□ 0.59
CMTM3-208ENST00000564247 NRCAMQ92823 1304 aa18.75■□□□□ 0.59
CMTM3-208ENST00000564247 GAS2O43903 313 aaKnown RBP18.75■□□□□ 0.59
CMTM3-208ENST00000564247 MAFO75444 373 aaPredicted RBP18.75■□□□□ 0.59
CMTM3-208ENST00000564247 FGBP02675 491 aa18.75■□□□□ 0.59
CMTM3-208ENST00000564247 PFKMP08237 780 aa18.75■□□□□ 0.59
CMTM3-208ENST00000564247 IQCF3P0C7M6 154 aa18.75■□□□□ 0.59
CMTM3-208ENST00000564247 GAP43P17677 238 aa18.75■□□□□ 0.59
CMTM3-208ENST00000564247 RFC2P35250 354 aa18.75■□□□□ 0.59
CMTM3-208ENST00000564247 SARSP49591 514 aaKnown RBP18.75■□□□□ 0.59
CMTM3-208ENST00000564247 DNM2P50570 870 aa18.75■□□□□ 0.59
CMTM3-208ENST00000564247 RBL2Q08999 1139 aa18.75■□□□□ 0.59
CMTM3-208ENST00000564247 KCNB1Q14721 858 aa18.75■□□□□ 0.59
CMTM3-208ENST00000564247 FAM102BQ5T8I3 360 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms