RNA–Protein interactions for RNA: ENST00000563848.1

DEF8-213, Transcript of differentially expressed in FDCP 8 homolog, humanhuman

TSL 3

Gene DEF8, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEF8-213ENST00000563848 DENND3A2RUS2 1198 aa17.14■□□□□ 0.33
DEF8-213ENST00000563848 ZBTB39O15060 712 aa17.14■□□□□ 0.33
DEF8-213ENST00000563848 EIF4BP23588 611 aaKnown RBP17.14■□□□□ 0.33
DEF8-213ENST00000563848 PRPHP41219 470 aa17.14■□□□□ 0.33
DEF8-213ENST00000563848 HTRA4P83105 476 aaPredicted RBP17.14■□□□□ 0.33
DEF8-213ENST00000563848 ZNF410Q86VK4 478 aa17.14■□□□□ 0.33
DEF8-213ENST00000563848 TCP11Q8WWU5 503 aa17.14■□□□□ 0.33
DEF8-213ENST00000563848 PSPC1Q8WXF1 523 aaKnown RBP17.14■□□□□ 0.33
DEF8-213ENST00000563848 LINC01599Q8WXQ3 324 aa17.14■□□□□ 0.33
DEF8-213ENST00000563848 MTRQ99707 1265 aa17.14■□□□□ 0.33
DEF8-213ENST00000563848 POLR3CQ9BUI4 534 aaPredicted RBP17.14■□□□□ 0.33
DEF8-213ENST00000563848 GCOM2Q9BZD3 368 aaPredicted RBP17.14■□□□□ 0.33
DEF8-213ENST00000563848 TMX1Q9H3N1 280 aa17.14■□□□□ 0.33
DEF8-213ENST00000563848 FOXD4L1Q9NU39 408 aa17.14■□□□□ 0.33
DEF8-213ENST00000563848 LRWD1Q9UFC0 647 aa17.14■□□□□ 0.33
DEF8-213ENST00000563848 STK24Q9Y6E0 443 aa17.14■□□□□ 0.33
DEF8-213ENST00000563848 CDH23Q9H251 3354 aa17.14■□□□□ 0.33
DEF8-213ENST00000563848 MED24O75448 989 aa17.13■□□□□ 0.33
DEF8-213ENST00000563848 ARHGEF15O94989 841 aa17.13■□□□□ 0.33
DEF8-213ENST00000563848 SPATA31C1P0DKV0 1188 aa17.13■□□□□ 0.33
DEF8-213ENST00000563848 DARSP14868 501 aaKnown RBP17.13■□□□□ 0.33
DEF8-213ENST00000563848 RPA1P27694 616 aa17.13■□□□□ 0.33
DEF8-213ENST00000563848 DTHD1Q6ZMT9 781 aa17.13■□□□□ 0.33
DEF8-213ENST00000563848 CATSPER3Q86XQ3 398 aa17.13■□□□□ 0.33
DEF8-213ENST00000563848 PIGOQ8TEQ8 1089 aa17.13■□□□□ 0.33
DEF8-213ENST00000563848 NLRP4Q96MN2 994 aa17.13■□□□□ 0.33
DEF8-213ENST00000563848 CERS4Q9HA82 394 aa17.13■□□□□ 0.33
DEF8-213ENST00000563848 ATP6V0A4Q9HBG4 840 aa17.13■□□□□ 0.33
DEF8-213ENST00000563848 C1orf112Q9NSG2 853 aa17.13■□□□□ 0.33
DEF8-213ENST00000563848 COL4A3BPQ9Y5P4 624 aa17.13■□□□□ 0.33
DEF8-213ENST00000563848 A0A087WZ62 844 aa17.12■□□□□ 0.33
DEF8-213ENST00000563848 LINC01553A4QN01 128 aa17.12■□□□□ 0.33
DEF8-213ENST00000563848 DGAT1O75907 488 aa17.12■□□□□ 0.33
DEF8-213ENST00000563848 STAG3L1P0CL83 205 aa17.12■□□□□ 0.33
DEF8-213ENST00000563848 XRCC6P12956 609 aaKnown RBP eCLIP17.12■□□□□ 0.33
DEF8-213ENST00000563848 SYT1P21579 422 aa17.12■□□□□ 0.33
DEF8-213ENST00000563848 IBSPP21815 317 aaPredicted RBP17.12■□□□□ 0.33
DEF8-213ENST00000563848 MUTP22033 750 aa17.12■□□□□ 0.33
DEF8-213ENST00000563848 CCT6AP40227 531 aaKnown RBP17.12■□□□□ 0.33
DEF8-213ENST00000563848 RARRES1P49788 294 aa17.12■□□□□ 0.33
DEF8-213ENST00000563848 ATP2C1P98194 919 aaPredicted RBP17.12■□□□□ 0.33
DEF8-213ENST00000563848 PDIA5Q14554 519 aa17.12■□□□□ 0.33
DEF8-213ENST00000563848 POTEGQ6S5H5 508 aa17.12■□□□□ 0.33
DEF8-213ENST00000563848 RTN4RL1Q86UN2 441 aaPredicted RBP17.12■□□□□ 0.33
DEF8-213ENST00000563848 FERMT3Q86UX7 667 aa17.12■□□□□ 0.33
DEF8-213ENST00000563848 NPAS4Q8IUM7 802 aa17.12■□□□□ 0.33
DEF8-213ENST00000563848 IGSF22Q8N9C0 903 aa17.12■□□□□ 0.33
DEF8-213ENST00000563848 SP7Q8TDD2 431 aaPredicted RBP17.12■□□□□ 0.33
DEF8-213ENST00000563848 ARNTL2Q8WYA1 636 aa17.12■□□□□ 0.33
DEF8-213ENST00000563848 TMEM143Q96AN5 459 aa17.12■□□□□ 0.33
DEF8-213ENST00000563848 NACC1Q96RE7 527 aa17.12■□□□□ 0.33
DEF8-213ENST00000563848 ADAM2Q99965 735 aa17.12■□□□□ 0.33
DEF8-213ENST00000563848 FDXACB1Q9BRP7 624 aaPredicted RBP17.12■□□□□ 0.33
DEF8-213ENST00000563848 INO80BQ9C086 356 aaPredicted RBP17.12■□□□□ 0.33
DEF8-213ENST00000563848 RNF216Q9NWF9 866 aaPredicted RBP17.12■□□□□ 0.33
DEF8-213ENST00000563848 LRFN2Q9ULH4 789 aa17.12■□□□□ 0.33
DEF8-213ENST00000563848 MYH15Q9Y2K3 1946 aa17.11■□□□□ 0.33
DEF8-213ENST00000563848 MGEA5O60502 916 aa17.11■□□□□ 0.33
DEF8-213ENST00000563848 HSP90AA1P07900 732 aaKnown RBP17.11■□□□□ 0.33
DEF8-213ENST00000563848 ZSCAN20P17040 1043 aaPredicted RBP17.11■□□□□ 0.33
DEF8-213ENST00000563848 SFPQP23246 707 aaKnown RBP eCLIP17.11■□□□□ 0.33
DEF8-213ENST00000563848 SARSP49591 514 aaKnown RBP17.11■□□□□ 0.33
DEF8-213ENST00000563848 KSR1Q8IVT5 923 aa17.11■□□□□ 0.33
DEF8-213ENST00000563848 SNX29Q8TEQ0 813 aa17.11■□□□□ 0.33
DEF8-213ENST00000563848 TGS1Q96RS0 853 aaKnown RBP17.11■□□□□ 0.33
DEF8-213ENST00000563848 RGS18Q9NS28 235 aa17.11■□□□□ 0.33
DEF8-213ENST00000563848 DBR1Q9UK59 544 aaKnown RBP17.11■□□□□ 0.33
DEF8-213ENST00000563848 ADGRA3Q8IWK6 1321 aa17.11■□□□□ 0.33
DEF8-213ENST00000563848 FNDC1Q4ZHG4 1894 aaPredicted RBP17.11■□□□□ 0.33
DEF8-213ENST00000563848 KIAA1671Q9BY89 1806 aa17.1■□□□□ 0.33
DEF8-213ENST00000563848 CHD9Q3L8U1 2897 aa17.1■□□□□ 0.33
DEF8-213ENST00000563848 A0A087WWV3 80 aa17.1■□□□□ 0.33
DEF8-213ENST00000563848 ASAP2O43150 1006 aa17.1■□□□□ 0.33
DEF8-213ENST00000563848 USO1O60763 962 aaKnown RBP17.1■□□□□ 0.33
DEF8-213ENST00000563848 BMP15O95972 392 aa17.1■□□□□ 0.33
DEF8-213ENST00000563848 IGFBP4P22692 258 aa17.1■□□□□ 0.33
DEF8-213ENST00000563848 KRT79Q5XKE5 535 aa17.1■□□□□ 0.33
DEF8-213ENST00000563848 SLC24A5Q71RS6 500 aa17.1■□□□□ 0.33
DEF8-213ENST00000563848 MAFAQ8NHW3 353 aaPredicted RBP17.1■□□□□ 0.33
DEF8-213ENST00000563848 PRPF31Q8WWY3 499 aaKnown RBP17.1■□□□□ 0.33
DEF8-213ENST00000563848 XPNPEP1Q9NQW7 623 aa17.1■□□□□ 0.33
DEF8-213ENST00000563848 MTUS1Q9ULD2 1270 aa17.1■□□□□ 0.33
DEF8-213ENST00000563848 PCDHB7Q9Y5E2 793 aa17.1■□□□□ 0.33
DEF8-213ENST00000563848 ARHGEF35A5YM69 484 aa17.09■□□□□ 0.33
DEF8-213ENST00000563848 CSDE1O75534 798 aaKnown RBP17.09■□□□□ 0.33
DEF8-213ENST00000563848 DGKIO75912 1065 aa17.09■□□□□ 0.33
DEF8-213ENST00000563848 SRGAP2CP0DJJ0 459 aa17.09■□□□□ 0.33
DEF8-213ENST00000563848 FGFR4P22455 802 aa17.09■□□□□ 0.33
DEF8-213ENST00000563848 ERVK-21P61565 698 aa17.09■□□□□ 0.33
DEF8-213ENST00000563848 LAMTOR4Q0VGL1 99 aa17.09■□□□□ 0.33
DEF8-213ENST00000563848 TFDP1Q14186 410 aa17.09■□□□□ 0.33
DEF8-213ENST00000563848 DSC3Q14574 896 aa17.09■□□□□ 0.33
DEF8-213ENST00000563848 MXD4Q14582 209 aaPredicted RBP17.09■□□□□ 0.33
DEF8-213ENST00000563848 ARL6IP4Q66PJ3 421 aaKnown RBP17.09■□□□□ 0.33
DEF8-213ENST00000563848 SPRED2Q7Z698 418 aa17.09■□□□□ 0.33
DEF8-213ENST00000563848 FIBCD1Q8N539 461 aa17.09■□□□□ 0.33
DEF8-213ENST00000563848 SAMD11Q96NU1 681 aa17.09■□□□□ 0.33
DEF8-213ENST00000563848 CHD7Q9P2D1 2997 aa17.09■□□□□ 0.33
DEF8-213ENST00000563848 VWA3AA6NCI4 1184 aa17.08■□□□□ 0.32
DEF8-213ENST00000563848 EPOPA6NHQ4 379 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms