RNA–Protein interactions for RNA: ENST00000563645.1

GDE1-202, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 2

Gene GDE1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-202ENST00000563645 ZZZ3Q8IYH5 903 aa5.38□□□□□ -1.55
GDE1-202ENST00000563645 NXPE1Q8N323 547 aa5.38□□□□□ -1.55
GDE1-202ENST00000563645 RPGRQ92834 1020 aaKnown RBP5.38□□□□□ -1.55
GDE1-202ENST00000563645 OR14A2Q96R54 314 aa5.38□□□□□ -1.55
GDE1-202ENST00000563645 ZMAT4Q9H898 229 aa5.38□□□□□ -1.55
GDE1-202ENST00000563645 IFT57Q9NWB7 429 aa5.38□□□□□ -1.55
GDE1-202ENST00000563645 THG1LQ9NWX6 298 aaKnown RBP5.38□□□□□ -1.55
GDE1-202ENST00000563645 KCMF1Q9P0J7 381 aa5.38□□□□□ -1.55
GDE1-202ENST00000563645 TBX22Q9Y458 520 aa5.38□□□□□ -1.55
GDE1-202ENST00000563645 CTDP1Q9Y5B0 961 aaPredicted RBP5.38□□□□□ -1.55
GDE1-202ENST00000563645 PMS2P1A4D2B8 440 aa5.37□□□□□ -1.55
GDE1-202ENST00000563645 MATN3O15232 486 aa5.37□□□□□ -1.55
GDE1-202ENST00000563645 TNFRSF1AP19438 455 aa5.37□□□□□ -1.55
GDE1-202ENST00000563645 COMTP21964 271 aa5.37□□□□□ -1.55
GDE1-202ENST00000563645 RPS19P39019 145 aaKnown RBP5.37□□□□□ -1.55
GDE1-202ENST00000563645 BCAR1P56945 870 aa5.37□□□□□ -1.55
GDE1-202ENST00000563645 ADAM15Q13444 863 aa5.37□□□□□ -1.55
GDE1-202ENST00000563645 PCBP1Q15365 356 aaKnown RBP eCLIP5.37□□□□□ -1.55
GDE1-202ENST00000563645 SEPT7Q16181 437 aaKnown RBP5.37□□□□□ -1.55
GDE1-202ENST00000563645 POLNQ7Z5Q5 900 aa5.37□□□□□ -1.55
GDE1-202ENST00000563645 BMP8AQ7Z5Y6 402 aa5.37□□□□□ -1.55
GDE1-202ENST00000563645 PALM2Q8IXS6 379 aa5.37□□□□□ -1.55
GDE1-202ENST00000563645 AHI1Q8N157 1196 aa5.37□□□□□ -1.55
GDE1-202ENST00000563645 CHTF18Q8WVB6 975 aa5.37□□□□□ -1.55
GDE1-202ENST00000563645 LPPQ93052 612 aa5.37□□□□□ -1.55
GDE1-202ENST00000563645 GFM2Q969S9 779 aaKnown RBP5.37□□□□□ -1.55
GDE1-202ENST00000563645 HAPLN2Q9GZV7 340 aa5.37□□□□□ -1.55
GDE1-202ENST00000563645 POLR3BQ9NW08 1133 aaPredicted RBP5.37□□□□□ -1.55
GDE1-202ENST00000563645 MAGEL2Q9UJ55 1249 aa5.37□□□□□ -1.55
GDE1-202ENST00000563645 DENND2AQ9ULE3 1009 aa5.37□□□□□ -1.55
GDE1-202ENST00000563645 SLC26A4O43511 780 aa5.36□□□□□ -1.55
GDE1-202ENST00000563645 H2AFYO75367 372 aaKnown RBP5.36□□□□□ -1.55
GDE1-202ENST00000563645 CD40P25942 277 aa5.36□□□□□ -1.55
GDE1-202ENST00000563645 KPNA1P52294 538 aaPredicted RBP5.36□□□□□ -1.55
GDE1-202ENST00000563645 ANTXR2P58335 489 aa5.36□□□□□ -1.55
GDE1-202ENST00000563645 ADCY2Q08462 1091 aa5.36□□□□□ -1.55
GDE1-202ENST00000563645 LRRC32Q14392 662 aa5.36□□□□□ -1.55
GDE1-202ENST00000563645 PLEKHG4Q58EX7 1191 aa5.36□□□□□ -1.55
GDE1-202ENST00000563645 TIGD7Q6NT04 549 aaPredicted RBP5.36□□□□□ -1.55
GDE1-202ENST00000563645 KANSL1Q7Z3B3 1105 aa5.36□□□□□ -1.55
GDE1-202ENST00000563645 PASD1Q8IV76 773 aa5.36□□□□□ -1.55
GDE1-202ENST00000563645 SMC1BQ8NDV3 1235 aa5.36□□□□□ -1.55
GDE1-202ENST00000563645 OR2W6PQ8NHA6 318 aa5.36□□□□□ -1.55
GDE1-202ENST00000563645 SH3RF3Q8TEJ3 882 aaPredicted RBP5.36□□□□□ -1.55
GDE1-202ENST00000563645 RTF1Q92541 710 aaKnown RBP5.36□□□□□ -1.55
GDE1-202ENST00000563645 NKD2Q969F2 451 aaPredicted RBP5.36□□□□□ -1.55
GDE1-202ENST00000563645 SLC7A6OSQ96CW6 309 aaPredicted RBP5.36□□□□□ -1.55
GDE1-202ENST00000563645 DYDC2Q96IM9 177 aa5.36□□□□□ -1.55
GDE1-202ENST00000563645 PITHD1Q9GZP4 211 aaPredicted RBP5.36□□□□□ -1.55
GDE1-202ENST00000563645 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.36□□□□□ -1.55
GDE1-202ENST00000563645 TESMINQ9Y4I5 508 aa5.36□□□□□ -1.55
GDE1-202ENST00000563645 GSG1L2A8MUP6 293 aa5.35□□□□□ -1.55
GDE1-202ENST00000563645 PRPF6O94906 941 aaKnown RBP5.35□□□□□ -1.55
GDE1-202ENST00000563645 SMAD3P84022 425 aaKnown RBP5.35□□□□□ -1.55
GDE1-202ENST00000563645 OCRLQ01968 901 aa5.35□□□□□ -1.55
GDE1-202ENST00000563645 KIAA1841Q6NSI8 718 aa5.35□□□□□ -1.55
GDE1-202ENST00000563645 GPR135Q8IZ08 494 aa5.35□□□□□ -1.55
GDE1-202ENST00000563645 SHCBP1Q8NEM2 672 aa5.35□□□□□ -1.55
GDE1-202ENST00000563645 EDAQ92838 391 aa5.35□□□□□ -1.55
GDE1-202ENST00000563645 PKNOX2Q96KN3 472 aa5.35□□□□□ -1.55
GDE1-202ENST00000563645 ADOQ96SZ5 270 aa5.35□□□□□ -1.55
GDE1-202ENST00000563645 MYL10Q9BUA6 226 aa5.35□□□□□ -1.55
GDE1-202ENST00000563645 NELFAQ9H3P2 528 aa5.35□□□□□ -1.55
GDE1-202ENST00000563645 POFUT1Q9H488 388 aa5.35□□□□□ -1.55
GDE1-202ENST00000563645 MAFGO15525 162 aa5.34□□□□□ -1.55
GDE1-202ENST00000563645 TGM5O43548 720 aa5.34□□□□□ -1.55
GDE1-202ENST00000563645 APOL3O95236 402 aa5.34□□□□□ -1.55
GDE1-202ENST00000563645 LSSP48449 732 aa5.34□□□□□ -1.55
GDE1-202ENST00000563645 SCNN1BP51168 640 aa5.34□□□□□ -1.55
GDE1-202ENST00000563645 RIN1Q13671 783 aa5.34□□□□□ -1.55
GDE1-202ENST00000563645 SART3Q15020 963 aaKnown RBP5.34□□□□□ -1.55
GDE1-202ENST00000563645 PRKD1Q15139 912 aaPredicted RBP5.34□□□□□ -1.55
GDE1-202ENST00000563645 TAF7LQ5H9L4 462 aa5.34□□□□□ -1.55
GDE1-202ENST00000563645 SPDYAQ5MJ70 313 aa5.34□□□□□ -1.55
GDE1-202ENST00000563645 GPR158Q5T848 1215 aa5.34□□□□□ -1.55
GDE1-202ENST00000563645 SPRED1Q7Z699 444 aa5.34□□□□□ -1.55
GDE1-202ENST00000563645 RABGGTAQ92696 567 aa5.34□□□□□ -1.55
GDE1-202ENST00000563645 GCDHQ92947 438 aaPredicted RBP5.34□□□□□ -1.55
GDE1-202ENST00000563645 WDR92Q96MX6 357 aa5.34□□□□□ -1.55
GDE1-202ENST00000563645 GPR101Q96P66 508 aaPredicted RBP5.34□□□□□ -1.55
GDE1-202ENST00000563645 SLC6A15Q9H2J7 730 aa5.34□□□□□ -1.55
GDE1-202ENST00000563645 MTG2Q9H4K7 406 aa5.34□□□□□ -1.55
GDE1-202ENST00000563645 USP36Q9P275 1121 aaKnown RBP5.34□□□□□ -1.55
GDE1-202ENST00000563645 A0A087X0B3 334 aa5.33□□□□□ -1.56
GDE1-202ENST00000563645 A0A0A6YYJ9 748 aa5.33□□□□□ -1.56
GDE1-202ENST00000563645 PDE8AO60658 829 aa5.33□□□□□ -1.56
GDE1-202ENST00000563645 OPHN1O60890 802 aa5.33□□□□□ -1.56
GDE1-202ENST00000563645 ACO1P21399 889 aaKnown RBP5.33□□□□□ -1.56
GDE1-202ENST00000563645 MSX2P35548 267 aaPredicted RBP5.33□□□□□ -1.56
GDE1-202ENST00000563645 ADCY7P51828 1080 aa5.33□□□□□ -1.56
GDE1-202ENST00000563645 IL2P60568 153 aa5.33□□□□□ -1.56
GDE1-202ENST00000563645 PHC1P78364 1004 aa5.33□□□□□ -1.56
GDE1-202ENST00000563645 ATP2C1P98194 919 aaPredicted RBP5.33□□□□□ -1.56
GDE1-202ENST00000563645 MAMDC4Q6UXC1 1216 aa5.33□□□□□ -1.56
GDE1-202ENST00000563645 Q6ZSN1 163 aa5.33□□□□□ -1.56
GDE1-202ENST00000563645 CLEC14AQ86T13 490 aa5.33□□□□□ -1.56
GDE1-202ENST00000563645 FAM89AQ96GI7 184 aa5.33□□□□□ -1.56
GDE1-202ENST00000563645 SPTLC3Q9NUV7 552 aa5.33□□□□□ -1.56
GDE1-202ENST00000563645 PLA2G3Q9NZ20 509 aa5.33□□□□□ -1.56
GDE1-202ENST00000563645 DNAI1Q9UI46 699 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms