RNA–Protein interactions for RNA: ENST00000563600.5

BBS4-206, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 4

Gene BBS4, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-206ENST00000563600 RTN4RL1Q86UN2 441 aaPredicted RBP16.51■□□□□ 0.23
BBS4-206ENST00000563600 FOXD4L4Q8WXT5 416 aaPredicted RBP16.51■□□□□ 0.23
BBS4-206ENST00000563600 MYLIPQ8WY64 445 aa16.51■□□□□ 0.23
BBS4-206ENST00000563600 CDX2Q99626 313 aaPredicted RBP16.51■□□□□ 0.23
BBS4-206ENST00000563600 FDXACB1Q9BRP7 624 aaPredicted RBP16.51■□□□□ 0.23
BBS4-206ENST00000563600 PRDM12Q9H4Q4 367 aa16.51■□□□□ 0.23
BBS4-206ENST00000563600 DHX33Q9H6R0 707 aaKnown RBP16.51■□□□□ 0.23
BBS4-206ENST00000563600 MTMR6Q9Y217 621 aa16.51■□□□□ 0.23
BBS4-206ENST00000563600 SQORQ9Y6N5 450 aa16.51■□□□□ 0.23
BBS4-206ENST00000563600 VWA3AA6NCI4 1184 aa16.5■□□□□ 0.23
BBS4-206ENST00000563600 LAD1O00515 517 aa16.5■□□□□ 0.23
BBS4-206ENST00000563600 USO1O60763 962 aaKnown RBP16.5■□□□□ 0.23
BBS4-206ENST00000563600 RFC5P40937 340 aa16.5■□□□□ 0.23
BBS4-206ENST00000563600 RARRES1P49788 294 aa16.5■□□□□ 0.23
BBS4-206ENST00000563600 ZRSR1Q15695 479 aaKnown RBP16.5■□□□□ 0.23
BBS4-206ENST00000563600 HAUS3Q68CZ6 603 aa16.5■□□□□ 0.23
BBS4-206ENST00000563600 MAEAQ7L5Y9 396 aa16.5■□□□□ 0.23
BBS4-206ENST00000563600 SNX29Q8TEQ0 813 aa16.5■□□□□ 0.23
BBS4-206ENST00000563600 PRPF31Q8WWY3 499 aaKnown RBP16.5■□□□□ 0.23
BBS4-206ENST00000563600 TOP1MTQ969P6 601 aa16.5■□□□□ 0.23
BBS4-206ENST00000563600 YME1L1Q96TA2 773 aa16.5■□□□□ 0.23
BBS4-206ENST00000563600 RAD9AQ99638 391 aa16.5■□□□□ 0.23
BBS4-206ENST00000563600 MTRQ99707 1265 aa16.5■□□□□ 0.23
BBS4-206ENST00000563600 JPH2Q9BR39 696 aaPredicted RBP16.5■□□□□ 0.23
BBS4-206ENST00000563600 POLR3CQ9BUI4 534 aaPredicted RBP16.5■□□□□ 0.23
BBS4-206ENST00000563600 XPNPEP1Q9NQW7 623 aa16.5■□□□□ 0.23
BBS4-206ENST00000563600 ANKEF1Q9NU02 776 aa16.5■□□□□ 0.23
BBS4-206ENST00000563600 MTUS1Q9ULD2 1270 aa16.5■□□□□ 0.23
BBS4-206ENST00000563600 ARID2Q68CP9 1835 aa16.49■□□□□ 0.23
BBS4-206ENST00000563600 TMEM265A0A087WTH1 108 aa16.49■□□□□ 0.23
BBS4-206ENST00000563600 GPR182O15218 404 aa16.49■□□□□ 0.23
BBS4-206ENST00000563600 STX6O43752 255 aa16.49■□□□□ 0.23
BBS4-206ENST00000563600 SRGAP2CP0DJJ0 459 aa16.49■□□□□ 0.23
BBS4-206ENST00000563600 DARSP14868 501 aaKnown RBP16.49■□□□□ 0.23
BBS4-206ENST00000563600 EIF4BP23588 611 aaKnown RBP16.49■□□□□ 0.23
BBS4-206ENST00000563600 RPA1P27694 616 aa16.49■□□□□ 0.23
BBS4-206ENST00000563600 PRPHP41219 470 aa16.49■□□□□ 0.23
BBS4-206ENST00000563600 TAP1Q03518 808 aa16.49■□□□□ 0.23
BBS4-206ENST00000563600 SF3A1Q15459 793 aaKnown RBP16.49■□□□□ 0.23
BBS4-206ENST00000563600 IGSF22Q8N9C0 903 aa16.49■□□□□ 0.23
BBS4-206ENST00000563600 PSPC1Q8WXF1 523 aaKnown RBP16.49■□□□□ 0.23
BBS4-206ENST00000563600 ADAM2Q99965 735 aa16.49■□□□□ 0.23
BBS4-206ENST00000563600 FTHL17Q9BXU8 183 aa16.49■□□□□ 0.23
BBS4-206ENST00000563600 RAB34Q9BZG1 259 aa16.49■□□□□ 0.23
BBS4-206ENST00000563600 COL4A3BPQ9Y5P4 624 aa16.49■□□□□ 0.23
BBS4-206ENST00000563600 DENND3A2RUS2 1198 aa16.48■□□□□ 0.23
BBS4-206ENST00000563600 RFXAPO00287 272 aa16.48■□□□□ 0.23
BBS4-206ENST00000563600 CEBPZQ03701 1054 aaKnown RBP16.48■□□□□ 0.23
BBS4-206ENST00000563600 LAMTOR4Q0VGL1 99 aa16.48■□□□□ 0.23
BBS4-206ENST00000563600 ARNTL2Q8WYA1 636 aa16.48■□□□□ 0.23
BBS4-206ENST00000563600 NACC1Q96RE7 527 aa16.48■□□□□ 0.23
BBS4-206ENST00000563600 PLIN2Q99541 437 aa16.48■□□□□ 0.23
BBS4-206ENST00000563600 GCOM2Q9BZD3 368 aaPredicted RBP16.48■□□□□ 0.23
BBS4-206ENST00000563600 TSPYL2Q9H2G4 693 aaPredicted RBP16.48■□□□□ 0.23
BBS4-206ENST00000563600 ATP6V0A4Q9HBG4 840 aa16.48■□□□□ 0.23
BBS4-206ENST00000563600 GPRC5CQ9NQ84 441 aa16.48■□□□□ 0.23
BBS4-206ENST00000563600 KIAA1024Q9UPX6 916 aa16.48■□□□□ 0.23
BBS4-206ENST00000563600 PPME1Q9Y570 386 aa16.48■□□□□ 0.23
BBS4-206ENST00000563600 CLIC4Q9Y696 253 aa16.48■□□□□ 0.23
BBS4-206ENST00000563600 ARHGEF35A5YM69 484 aa16.47■□□□□ 0.23
BBS4-206ENST00000563600 EPOPA6NHQ4 379 aa16.47■□□□□ 0.23
BBS4-206ENST00000563600 DGAT1O75907 488 aa16.47■□□□□ 0.23
BBS4-206ENST00000563600 GATMP50440 423 aa16.47■□□□□ 0.23
BBS4-206ENST00000563600 PDIA5Q14554 519 aa16.47■□□□□ 0.23
BBS4-206ENST00000563600 KRT79Q5XKE5 535 aa16.47■□□□□ 0.23
BBS4-206ENST00000563600 ASAP3Q8TDY4 903 aa16.47■□□□□ 0.23
BBS4-206ENST00000563600 TCP11Q8WWU5 503 aa16.47■□□□□ 0.23
BBS4-206ENST00000563600 POLR3FQ9H1D9 316 aaPredicted RBP16.47■□□□□ 0.23
BBS4-206ENST00000563600 POLD4Q9HCU8 107 aa16.47■□□□□ 0.23
BBS4-206ENST00000563600 DDX19AQ9NUU7 478 aaKnown RBP16.47■□□□□ 0.23
BBS4-206ENST00000563600 INSL6Q9Y581 213 aa16.47■□□□□ 0.23
BBS4-206ENST00000563600 LINC01553A4QN01 128 aa16.46■□□□□ 0.23
BBS4-206ENST00000563600 FOSL2P15408 326 aa16.46■□□□□ 0.23
BBS4-206ENST00000563600 HTRA4P83105 476 aaPredicted RBP16.46■□□□□ 0.23
BBS4-206ENST00000563600 GRIN1Q05586 938 aa16.46■□□□□ 0.23
BBS4-206ENST00000563600 PAN2Q504Q3 1202 aaKnown RBP16.46■□□□□ 0.23
BBS4-206ENST00000563600 ODR4Q5SWX8 454 aa16.46■□□□□ 0.23
BBS4-206ENST00000563600 PADI6Q6TGC4 694 aa16.46■□□□□ 0.23
BBS4-206ENST00000563600 ZNF410Q86VK4 478 aa16.46■□□□□ 0.23
BBS4-206ENST00000563600 EXOC8Q8IYI6 725 aa16.46■□□□□ 0.23
BBS4-206ENST00000563600 RNF149Q8NC42 400 aa16.46■□□□□ 0.23
BBS4-206ENST00000563600 MMTAG2Q9BU76 263 aaKnown RBP16.46■□□□□ 0.23
BBS4-206ENST00000563600 BHMT2Q9H2M3 363 aa16.46■□□□□ 0.23
BBS4-206ENST00000563600 IFT122Q9HBG6 1241 aa16.46■□□□□ 0.23
BBS4-206ENST00000563600 DBR1Q9UK59 544 aaKnown RBP16.46■□□□□ 0.23
BBS4-206ENST00000563600 E9PMD0 336 aa16.45■□□□□ 0.22
BBS4-206ENST00000563600 GAS2O43903 313 aaKnown RBP16.45■□□□□ 0.22
BBS4-206ENST00000563600 XRCC6P12956 609 aaKnown RBP eCLIP16.45■□□□□ 0.22
BBS4-206ENST00000563600 MARCKSP29966 332 aaPredicted RBP16.45■□□□□ 0.22
BBS4-206ENST00000563600 CDC42EP1Q00587 391 aa16.45■□□□□ 0.22
BBS4-206ENST00000563600 DSC3Q14574 896 aa16.45■□□□□ 0.22
BBS4-206ENST00000563600 FOXD4L6Q3SYB3 417 aaPredicted RBP16.45■□□□□ 0.22
BBS4-206ENST00000563600 FAM102BQ5T8I3 360 aa16.45■□□□□ 0.22
BBS4-206ENST00000563600 ARL6IP4Q66PJ3 421 aaKnown RBP16.45■□□□□ 0.22
BBS4-206ENST00000563600 FOXD4L3Q6VB84 417 aaPredicted RBP16.45■□□□□ 0.22
BBS4-206ENST00000563600 CATSPER4Q7RTX7 472 aa16.45■□□□□ 0.22
BBS4-206ENST00000563600 KCNK18Q7Z418 384 aa16.45■□□□□ 0.22
BBS4-206ENST00000563600 NPAS4Q8IUM7 802 aa16.45■□□□□ 0.22
BBS4-206ENST00000563600 ZNF710Q8N1W2 664 aa16.45■□□□□ 0.22
BBS4-206ENST00000563600 MINDY3Q9H8M7 445 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms