RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 ADAMTS10Q9H324 1103 aa18.01■□□□□ 0.47
COMMD4-206ENST00000562610 TMX1Q9H3N1 280 aa18.01■□□□□ 0.47
COMMD4-206ENST00000562610 TUFT1Q9NNX1 390 aa18.01■□□□□ 0.47
COMMD4-206ENST00000562610 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.01■□□□□ 0.47
COMMD4-206ENST00000562610 MTUS1Q9ULD2 1270 aa18.01■□□□□ 0.47
COMMD4-206ENST00000562610 ATG2AQ2TAZ0 1938 aa18■□□□□ 0.47
COMMD4-206ENST00000562610 LINC01553A4QN01 128 aa18■□□□□ 0.47
COMMD4-206ENST00000562610 LAD1O00515 517 aa18■□□□□ 0.47
COMMD4-206ENST00000562610 MED24O75448 989 aa18■□□□□ 0.47
COMMD4-206ENST00000562610 LYPLA2O95372 231 aa18■□□□□ 0.47
COMMD4-206ENST00000562610 FXR2P51116 673 aaKnown RBP eCLIP18■□□□□ 0.47
COMMD4-206ENST00000562610 POTEGQ6S5H5 508 aa18■□□□□ 0.47
COMMD4-206ENST00000562610 HSCBQ8IWL3 235 aa18■□□□□ 0.47
COMMD4-206ENST00000562610 C4orf32Q8N8J7 132 aa18■□□□□ 0.47
COMMD4-206ENST00000562610 PIGOQ8TEQ8 1089 aa18■□□□□ 0.47
COMMD4-206ENST00000562610 TMEM143Q96AN5 459 aa18■□□□□ 0.47
COMMD4-206ENST00000562610 MTRQ99707 1265 aa18■□□□□ 0.47
COMMD4-206ENST00000562610 RAB34Q9BZG1 259 aa18■□□□□ 0.47
COMMD4-206ENST00000562610 DHX33Q9H6R0 707 aaKnown RBP18■□□□□ 0.47
COMMD4-206ENST00000562610 CHD7Q9P2D1 2997 aa18■□□□□ 0.47
COMMD4-206ENST00000562610 COL6A3P12111 3177 aa17.99■□□□□ 0.47
COMMD4-206ENST00000562610 A0A087WZ62 844 aa17.99■□□□□ 0.47
COMMD4-206ENST00000562610 GAS2O43903 313 aaKnown RBP17.99■□□□□ 0.47
COMMD4-206ENST00000562610 MGEA5O60502 916 aa17.99■□□□□ 0.47
COMMD4-206ENST00000562610 SPATA31C1P0DKV0 1188 aa17.99■□□□□ 0.47
COMMD4-206ENST00000562610 DARSP14868 501 aaKnown RBP17.99■□□□□ 0.47
COMMD4-206ENST00000562610 IGFBP4P22692 258 aa17.99■□□□□ 0.47
COMMD4-206ENST00000562610 EIF4BP23588 611 aaKnown RBP17.99■□□□□ 0.47
COMMD4-206ENST00000562610 CDC42EP1Q00587 391 aa17.99■□□□□ 0.47
COMMD4-206ENST00000562610 RTN4RL1Q86UN2 441 aaPredicted RBP17.99■□□□□ 0.47
COMMD4-206ENST00000562610 FERMT3Q86UX7 667 aa17.99■□□□□ 0.47
COMMD4-206ENST00000562610 ZNF410Q86VK4 478 aa17.99■□□□□ 0.47
COMMD4-206ENST00000562610 CATSPER3Q86XQ3 398 aa17.99■□□□□ 0.47
COMMD4-206ENST00000562610 KSR1Q8IVT5 923 aa17.99■□□□□ 0.47
COMMD4-206ENST00000562610 MAFAQ8NHW3 353 aaPredicted RBP17.99■□□□□ 0.47
COMMD4-206ENST00000562610 PSPC1Q8WXF1 523 aaKnown RBP17.99■□□□□ 0.47
COMMD4-206ENST00000562610 INTS4Q96HW7 963 aaKnown RBP17.99■□□□□ 0.47
COMMD4-206ENST00000562610 ADAM2Q99965 735 aa17.99■□□□□ 0.47
COMMD4-206ENST00000562610 FDXACB1Q9BRP7 624 aaPredicted RBP17.99■□□□□ 0.47
COMMD4-206ENST00000562610 GCOM2Q9BZD3 368 aaPredicted RBP17.99■□□□□ 0.47
COMMD4-206ENST00000562610 ATP6V0A4Q9HBG4 840 aa17.99■□□□□ 0.47
COMMD4-206ENST00000562610 ANKEF1Q9NU02 776 aa17.99■□□□□ 0.47
COMMD4-206ENST00000562610 LRWD1Q9UFC0 647 aa17.99■□□□□ 0.47
COMMD4-206ENST00000562610 LRFN2Q9ULH4 789 aa17.99■□□□□ 0.47
COMMD4-206ENST00000562610 COL4A3BPQ9Y5P4 624 aa17.99■□□□□ 0.47
COMMD4-206ENST00000562610 ADGRA3Q8IWK6 1321 aa17.98■□□□□ 0.47
COMMD4-206ENST00000562610 A0A087WWV3 80 aa17.98■□□□□ 0.47
COMMD4-206ENST00000562610 USO1O60763 962 aaKnown RBP17.98■□□□□ 0.47
COMMD4-206ENST00000562610 STAG3L1P0CL83 205 aa17.98■□□□□ 0.47
COMMD4-206ENST00000562610 FGFR4P22455 802 aa17.98■□□□□ 0.47
COMMD4-206ENST00000562610 CCT6AP40227 531 aaKnown RBP17.98■□□□□ 0.47
COMMD4-206ENST00000562610 RARRES1P49788 294 aa17.98■□□□□ 0.47
COMMD4-206ENST00000562610 BRAPQ7Z569 592 aa17.98■□□□□ 0.47
COMMD4-206ENST00000562610 NPAS4Q8IUM7 802 aa17.98■□□□□ 0.47
COMMD4-206ENST00000562610 SP7Q8TDD2 431 aaPredicted RBP17.98■□□□□ 0.47
COMMD4-206ENST00000562610 SNX29Q8TEQ0 813 aa17.98■□□□□ 0.47
COMMD4-206ENST00000562610 TCP11Q8WWU5 503 aa17.98■□□□□ 0.47
COMMD4-206ENST00000562610 TGS1Q96RS0 853 aaKnown RBP17.98■□□□□ 0.47
COMMD4-206ENST00000562610 POLR3CQ9BUI4 534 aaPredicted RBP17.98■□□□□ 0.47
COMMD4-206ENST00000562610 C1orf112Q9NSG2 853 aa17.98■□□□□ 0.47
COMMD4-206ENST00000562610 EPOPA6NHQ4 379 aa17.97■□□□□ 0.47
COMMD4-206ENST00000562610 RFXAPO00287 272 aa17.97■□□□□ 0.47
COMMD4-206ENST00000562610 CSDE1O75534 798 aaKnown RBP17.97■□□□□ 0.47
COMMD4-206ENST00000562610 DGAT1O75907 488 aa17.97■□□□□ 0.47
COMMD4-206ENST00000562610 HSP90AA1P07900 732 aaKnown RBP17.97■□□□□ 0.47
COMMD4-206ENST00000562610 SFPQP23246 707 aaKnown RBP eCLIP17.97■□□□□ 0.47
COMMD4-206ENST00000562610 RPA1P27694 616 aa17.97■□□□□ 0.47
COMMD4-206ENST00000562610 PRPHP41219 470 aa17.97■□□□□ 0.47
COMMD4-206ENST00000562610 SARSP49591 514 aaKnown RBP17.97■□□□□ 0.47
COMMD4-206ENST00000562610 ATP2C1P98194 919 aaPredicted RBP17.97■□□□□ 0.47
COMMD4-206ENST00000562610 DTHD1Q6ZMT9 781 aa17.97■□□□□ 0.47
COMMD4-206ENST00000562610 IGSF22Q8N9C0 903 aa17.97■□□□□ 0.47
COMMD4-206ENST00000562610 GDPD5Q8WTR4 605 aa17.97■□□□□ 0.47
COMMD4-206ENST00000562610 SNX21Q969T3 373 aa17.97■□□□□ 0.47
COMMD4-206ENST00000562610 RGS18Q9NS28 235 aa17.97■□□□□ 0.47
COMMD4-206ENST00000562610 SRGAP2CP0DJJ0 459 aa17.96■□□□□ 0.47
COMMD4-206ENST00000562610 ZSCAN20P17040 1043 aaPredicted RBP17.96■□□□□ 0.47
COMMD4-206ENST00000562610 SYT1P21579 422 aa17.96■□□□□ 0.47
COMMD4-206ENST00000562610 LAMTOR4Q0VGL1 99 aa17.96■□□□□ 0.47
COMMD4-206ENST00000562610 ADGRE1Q14246 886 aa17.96■□□□□ 0.47
COMMD4-206ENST00000562610 FAM43BQ6ZT52 329 aaPredicted RBP17.96■□□□□ 0.47
COMMD4-206ENST00000562610 SLC24A5Q71RS6 500 aa17.96■□□□□ 0.47
COMMD4-206ENST00000562610 MICALL1Q8N3F8 863 aa17.96■□□□□ 0.47
COMMD4-206ENST00000562610 FIBCD1Q8N539 461 aa17.96■□□□□ 0.47
COMMD4-206ENST00000562610 PRPF31Q8WWY3 499 aaKnown RBP17.96■□□□□ 0.47
COMMD4-206ENST00000562610 NACC1Q96RE7 527 aa17.96■□□□□ 0.47
COMMD4-206ENST00000562610 C17orf80Q9BSJ5 609 aa17.96■□□□□ 0.47
COMMD4-206ENST00000562610 INO80BQ9C086 356 aaPredicted RBP17.96■□□□□ 0.47
COMMD4-206ENST00000562610 XPNPEP1Q9NQW7 623 aa17.96■□□□□ 0.47
COMMD4-206ENST00000562610 PCDHB7Q9Y5E2 793 aa17.96■□□□□ 0.47
COMMD4-206ENST00000562610 PLXNA4Q9HCM2 1894 aa17.96■□□□□ 0.47
COMMD4-206ENST00000562610 EYSQ5T1H1 3165 aa17.96■□□□□ 0.47
COMMD4-206ENST00000562610 PP2D1A8MPX8 630 aa17.95■□□□□ 0.46
COMMD4-206ENST00000562610 DGKIO75912 1065 aa17.95■□□□□ 0.46
COMMD4-206ENST00000562610 XRCC6P12956 609 aaKnown RBP eCLIP17.95■□□□□ 0.46
COMMD4-206ENST00000562610 ERVK-21P61565 698 aa17.95■□□□□ 0.46
COMMD4-206ENST00000562610 BTG3Q14201 252 aaPredicted RBP17.95■□□□□ 0.46
COMMD4-206ENST00000562610 PDIA5Q14554 519 aa17.95■□□□□ 0.46
COMMD4-206ENST00000562610 PAN2Q504Q3 1202 aaKnown RBP17.95■□□□□ 0.46
COMMD4-206ENST00000562610 CATSPER4Q7RTX7 472 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms