RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 FLRT1Q9NZU1 646 aa15.74■□□□□ 0.11
COMMD4-205ENST00000562310 CGNQ9P2M7 1197 aaKnown RBP15.74■□□□□ 0.11
COMMD4-205ENST00000562310 IMPACTQ9P2X3 320 aa15.74■□□□□ 0.11
COMMD4-205ENST00000562310 Q9Y3F1 56 aa15.74■□□□□ 0.11
COMMD4-205ENST00000562310 COL1A2P08123 1366 aa15.74■□□□□ 0.11
COMMD4-205ENST00000562310 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.73■□□□□ 0.11
COMMD4-205ENST00000562310 LRRC10BA6NIK2 292 aa15.73■□□□□ 0.11
COMMD4-205ENST00000562310 PRPF6O94906 941 aaKnown RBP15.73■□□□□ 0.11
COMMD4-205ENST00000562310 SLC34A2O95436 690 aa15.73■□□□□ 0.11
COMMD4-205ENST00000562310 ZNF865P0CJ78 1059 aaPredicted RBP15.73■□□□□ 0.11
COMMD4-205ENST00000562310 RPL13P26373 211 aaKnown RBP15.73■□□□□ 0.11
COMMD4-205ENST00000562310 CTGFP29279 349 aa15.73■□□□□ 0.11
COMMD4-205ENST00000562310 NMT1P30419 496 aaKnown RBP15.73■□□□□ 0.11
COMMD4-205ENST00000562310 COPB1P53618 953 aaKnown RBP15.73■□□□□ 0.11
COMMD4-205ENST00000562310 SNRPFP62306 86 aaKnown RBP15.73■□□□□ 0.11
COMMD4-205ENST00000562310 PLCB4Q15147 1175 aa15.73■□□□□ 0.11
COMMD4-205ENST00000562310 CCL14Q16627 93 aa15.73■□□□□ 0.11
COMMD4-205ENST00000562310 MFSD14CQ5VZR4 134 aa15.73■□□□□ 0.11
COMMD4-205ENST00000562310 MAEAQ7L5Y9 396 aa15.73■□□□□ 0.11
COMMD4-205ENST00000562310 HS2ST1Q7LGA3 356 aa15.73■□□□□ 0.11
COMMD4-205ENST00000562310 APTXQ7Z2E3 356 aaKnown RBP15.73■□□□□ 0.11
COMMD4-205ENST00000562310 TRMT1LQ7Z2T5 733 aaKnown RBP15.73■□□□□ 0.11
COMMD4-205ENST00000562310 IRF2BP1Q8IU81 584 aa15.73■□□□□ 0.11
COMMD4-205ENST00000562310 AFG1LQ8WV93 481 aa15.73■□□□□ 0.11
COMMD4-205ENST00000562310 ACCSQ96QU6 501 aa15.73■□□□□ 0.11
COMMD4-205ENST00000562310 SH2D3AQ9BRG2 576 aa15.73■□□□□ 0.11
COMMD4-205ENST00000562310 POLR3FQ9H1D9 316 aaPredicted RBP15.73■□□□□ 0.11
COMMD4-205ENST00000562310 FAM184BQ9ULE4 1060 aa15.73■□□□□ 0.11
COMMD4-205ENST00000562310 TRPC6Q9Y210 931 aa15.73■□□□□ 0.11
COMMD4-205ENST00000562310 ZMYM2Q9UBW7 1377 aa15.73■□□□□ 0.11
COMMD4-205ENST00000562310 CETN3O15182 167 aa15.72■□□□□ 0.11
COMMD4-205ENST00000562310 MAFO75444 373 aaPredicted RBP15.72■□□□□ 0.11
COMMD4-205ENST00000562310 ECM2O94769 699 aaPredicted RBP15.72■□□□□ 0.11
COMMD4-205ENST00000562310 MMP3P08254 477 aa15.72■□□□□ 0.11
COMMD4-205ENST00000562310 HOXD10P28358 340 aa15.72■□□□□ 0.11
COMMD4-205ENST00000562310 CYP2C19P33261 490 aa15.72■□□□□ 0.11
COMMD4-205ENST00000562310 PEX3P56589 373 aa15.72■□□□□ 0.11
COMMD4-205ENST00000562310 GSDMDP57764 484 aa15.72■□□□□ 0.11
COMMD4-205ENST00000562310 GTF2BQ00403 316 aa15.72■□□□□ 0.11
COMMD4-205ENST00000562310 TBC1D8BQ0IIM8 1120 aa15.72■□□□□ 0.11
COMMD4-205ENST00000562310 DGKDQ16760 1214 aa15.72■□□□□ 0.11
COMMD4-205ENST00000562310 BRDTQ58F21 947 aaPredicted RBP15.72■□□□□ 0.11
COMMD4-205ENST00000562310 ZNF484Q5JVG2 852 aa15.72■□□□□ 0.11
COMMD4-205ENST00000562310 TMEM63BQ5T3F8 832 aa15.72■□□□□ 0.11
COMMD4-205ENST00000562310 GJC2Q5T442 439 aaPredicted RBP15.72■□□□□ 0.11
COMMD4-205ENST00000562310 FILIP1Q7Z7B0 1213 aa15.72■□□□□ 0.11
COMMD4-205ENST00000562310 TRIM50Q86XT4 487 aa15.72■□□□□ 0.11
COMMD4-205ENST00000562310 VSTM4Q8IW00 320 aa15.72■□□□□ 0.11
COMMD4-205ENST00000562310 SPC24Q8NBT2 197 aa15.72■□□□□ 0.11
COMMD4-205ENST00000562310 TCP11Q8WWU5 503 aa15.72■□□□□ 0.11
COMMD4-205ENST00000562310 KCNN1Q92952 543 aa15.72■□□□□ 0.11
COMMD4-205ENST00000562310 CEP89Q96ST8 783 aa15.72■□□□□ 0.11
COMMD4-205ENST00000562310 NTPCRQ9BSD7 190 aaKnown RBP15.72■□□□□ 0.11
COMMD4-205ENST00000562310 GPRC5CQ9NQ84 441 aa15.72■□□□□ 0.11
COMMD4-205ENST00000562310 EXOC7Q9UPT5 735 aa15.72■□□□□ 0.11
COMMD4-205ENST00000562310 GNEQ9Y223 722 aaKnown RBP15.72■□□□□ 0.11
COMMD4-205ENST00000562310 N4BP3O15049 544 aa15.71■□□□□ 0.11
COMMD4-205ENST00000562310 SLC16A3O15427 465 aaKnown RBP15.71■□□□□ 0.11
COMMD4-205ENST00000562310 TBC1D8O95759 1140 aa15.71■□□□□ 0.11
COMMD4-205ENST00000562310 GNRH1P01148 92 aa15.71■□□□□ 0.11
COMMD4-205ENST00000562310 AKR1A1P14550 325 aa15.71■□□□□ 0.11
COMMD4-205ENST00000562310 MARK3P27448 753 aa15.71■□□□□ 0.11
COMMD4-205ENST00000562310 HOXD13P35453 343 aa15.71■□□□□ 0.11
COMMD4-205ENST00000562310 MTIF2P46199 727 aaKnown RBP15.71■□□□□ 0.11
COMMD4-205ENST00000562310 NPTX2P47972 431 aa15.71■□□□□ 0.11
COMMD4-205ENST00000562310 VEGFBP49765 207 aa15.71■□□□□ 0.11
COMMD4-205ENST00000562310 HTRA3P83110 453 aa15.71■□□□□ 0.11
COMMD4-205ENST00000562310 MYBPC2Q14324 1141 aa15.71■□□□□ 0.11
COMMD4-205ENST00000562310 NR1I3Q14994 352 aa15.71■□□□□ 0.11
COMMD4-205ENST00000562310 HAUS6Q7Z4H7 955 aa15.71■□□□□ 0.11
COMMD4-205ENST00000562310 TLK2Q86UE8 772 aa15.71■□□□□ 0.11
COMMD4-205ENST00000562310 SYCP3Q8IZU3 236 aa15.71■□□□□ 0.11
COMMD4-205ENST00000562310 NAP1L5Q96NT1 182 aaPredicted RBP15.71■□□□□ 0.11
COMMD4-205ENST00000562310 ARHGAP39Q9C0H5 1083 aa15.71■□□□□ 0.11
COMMD4-205ENST00000562310 GBP3Q9H0R5 595 aa15.71■□□□□ 0.11
COMMD4-205ENST00000562310 POLD4Q9HCU8 107 aa15.71■□□□□ 0.11
COMMD4-205ENST00000562310 RTN4Q9NQC3 1192 aaKnown RBP15.71■□□□□ 0.11
COMMD4-205ENST00000562310 KMT5AQ9NQR1 393 aa15.71■□□□□ 0.11
COMMD4-205ENST00000562310 RNF186Q9NXI6 227 aa15.71■□□□□ 0.11
COMMD4-205ENST00000562310 SAGE1Q9NXZ1 904 aa15.71■□□□□ 0.11
COMMD4-205ENST00000562310 TAB2Q9NYJ8 693 aa15.71■□□□□ 0.11
COMMD4-205ENST00000562310 PHLPP2Q6ZVD8 1323 aa15.7■□□□□ 0.1
COMMD4-205ENST00000562310 A6NJR5 290 aa15.7■□□□□ 0.1
COMMD4-205ENST00000562310 CCDC169A6NNP5 214 aa15.7■□□□□ 0.1
COMMD4-205ENST00000562310 LGALS16A8MUM7 142 aa15.7■□□□□ 0.1
COMMD4-205ENST00000562310 NR3C1P04150 777 aa15.7■□□□□ 0.1
COMMD4-205ENST00000562310 NR2F2P24468 414 aa15.7■□□□□ 0.1
COMMD4-205ENST00000562310 ARL2P36404 184 aa15.7■□□□□ 0.1
COMMD4-205ENST00000562310 NAMPTP43490 491 aa15.7■□□□□ 0.1
COMMD4-205ENST00000562310 FLT3LGP49771 235 aa15.7■□□□□ 0.1
COMMD4-205ENST00000562310 CPT1AP50416 773 aa15.7■□□□□ 0.1
COMMD4-205ENST00000562310 MARSP56192 900 aaKnown RBP15.7■□□□□ 0.1
COMMD4-205ENST00000562310 ARHGEF6Q15052 776 aa15.7■□□□□ 0.1
COMMD4-205ENST00000562310 CCDC40Q4G0X9 1142 aa15.7■□□□□ 0.1
COMMD4-205ENST00000562310 ZC2HC1CQ53FD0 456 aaPredicted RBP15.7■□□□□ 0.1
COMMD4-205ENST00000562310 IER5Q5VY09 327 aa15.7■□□□□ 0.1
COMMD4-205ENST00000562310 TMC6Q7Z403 805 aa15.7■□□□□ 0.1
COMMD4-205ENST00000562310 TMEM174Q8WUU8 243 aa15.7■□□□□ 0.1
COMMD4-205ENST00000562310 TUBGCP2Q9BSJ2 902 aa15.7■□□□□ 0.1
COMMD4-205ENST00000562310 AP5M1Q9H0R1 490 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms