RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 GALNT17Q6IS24 598 aa20.13■□□□□ 0.81
RAB40C-206ENST00000561781 SMYD1Q8NB12 490 aa20.13■□□□□ 0.81
RAB40C-206ENST00000561781 ZNF333Q96JL9 665 aa20.13■□□□□ 0.81
RAB40C-206ENST00000561781 TXLNGQ9NUQ3 528 aa20.13■□□□□ 0.81
RAB40C-206ENST00000561781 PACSIN2Q9UNF0 486 aaPredicted RBP20.13■□□□□ 0.81
RAB40C-206ENST00000561781 PALMO75781 387 aa20.13■□□□□ 0.81
RAB40C-206ENST00000561781 FLT3P36888 993 aa20.13■□□□□ 0.81
RAB40C-206ENST00000561781 SLC1A4P43007 532 aa20.13■□□□□ 0.81
RAB40C-206ENST00000561781 DHX9Q08211 1270 aaKnown RBP20.13■□□□□ 0.81
RAB40C-206ENST00000561781 WTAPQ15007 396 aa20.13■□□□□ 0.81
RAB40C-206ENST00000561781 CRY2Q49AN0 593 aa20.13■□□□□ 0.81
RAB40C-206ENST00000561781 AGGF1Q8N302 714 aaeCLIP20.13■□□□□ 0.81
RAB40C-206ENST00000561781 FANCBQ8NB91 859 aa20.13■□□□□ 0.81
RAB40C-206ENST00000561781 WDR66Q8TBY9 1149 aa20.13■□□□□ 0.81
RAB40C-206ENST00000561781 CCDC28BQ9BUN5 200 aa20.13■□□□□ 0.81
RAB40C-206ENST00000561781 ETNK1Q9HBU6 452 aa20.13■□□□□ 0.81
RAB40C-206ENST00000561781 FAM207AQ9NSI2 230 aaPredicted RBP20.13■□□□□ 0.81
RAB40C-206ENST00000561781 PNMA3Q9UL41 463 aa20.13■□□□□ 0.81
RAB40C-206ENST00000561781 MROH7Q68CQ1 1323 aa20.13■□□□□ 0.81
RAB40C-206ENST00000561781 hCG_1642624A0A1W2PR95 340 aa20.12■□□□□ 0.81
RAB40C-206ENST00000561781 TPD52L2O43399 206 aaKnown RBP20.12■□□□□ 0.81
RAB40C-206ENST00000561781 ATP5HO75947 161 aa20.12■□□□□ 0.81
RAB40C-206ENST00000561781 XBP1P17861 261 aa20.12■□□□□ 0.81
RAB40C-206ENST00000561781 CNPY1Q3B7I2 92 aa20.12■□□□□ 0.81
RAB40C-206ENST00000561781 STKLD1Q8NE28 680 aa20.12■□□□□ 0.81
RAB40C-206ENST00000561781 TBC1D16Q8TBP0 767 aa20.12■□□□□ 0.81
RAB40C-206ENST00000561781 RPGRQ92834 1020 aaKnown RBP20.12■□□□□ 0.81
RAB40C-206ENST00000561781 HAPLN3Q96S86 360 aa20.12■□□□□ 0.81
RAB40C-206ENST00000561781 MIS12Q9H081 205 aa20.12■□□□□ 0.81
RAB40C-206ENST00000561781 PAIP2BQ9ULR5 123 aaKnown RBP20.12■□□□□ 0.81
RAB40C-206ENST00000561781 TRIM33Q9UPN9 1127 aa20.12■□□□□ 0.81
RAB40C-206ENST00000561781 MYH6P13533 1939 aa20.12■□□□□ 0.81
RAB40C-206ENST00000561781 CCDC169A6NNP5 214 aa20.12■□□□□ 0.81
RAB40C-206ENST00000561781 PRPF3O43395 683 aaKnown RBP20.12■□□□□ 0.81
RAB40C-206ENST00000561781 USP46P62068 366 aa20.12■□□□□ 0.81
RAB40C-206ENST00000561781 LSAMPQ13449 338 aa20.12■□□□□ 0.81
RAB40C-206ENST00000561781 RCN2Q14257 317 aa20.12■□□□□ 0.81
RAB40C-206ENST00000561781 WASHC2DQ5SRD0 308 aa20.12■□□□□ 0.81
RAB40C-206ENST00000561781 FITM2Q8N6M3 262 aa20.12■□□□□ 0.81
RAB40C-206ENST00000561781 SLC17A8Q8NDX2 589 aa20.12■□□□□ 0.81
RAB40C-206ENST00000561781 LARSQ9P2J5 1176 aaKnown RBP20.12■□□□□ 0.81
RAB40C-206ENST00000561781 STOML1Q9UBI4 398 aa20.12■□□□□ 0.81
RAB40C-206ENST00000561781 H0YIN7 160 aa20.11■□□□□ 0.81
RAB40C-206ENST00000561781 CEP104O60308 925 aa20.11■□□□□ 0.81
RAB40C-206ENST00000561781 LGR5O75473 907 aa20.11■□□□□ 0.81
RAB40C-206ENST00000561781 SLC4A8Q2Y0W8 1093 aa20.11■□□□□ 0.81
RAB40C-206ENST00000561781 AKNAD1Q5T1N1 836 aa20.11■□□□□ 0.81
RAB40C-206ENST00000561781 CROCCP2Q86T23 111 aa20.11■□□□□ 0.81
RAB40C-206ENST00000561781 ZSCAN29Q8IWY8 852 aaPredicted RBP20.11■□□□□ 0.81
RAB40C-206ENST00000561781 ZBTB8BQ8NAP8 495 aaPredicted RBP20.11■□□□□ 0.81
RAB40C-206ENST00000561781 UTP4Q969X6 686 aaKnown RBP20.11■□□□□ 0.81
RAB40C-206ENST00000561781 DDX27Q96GQ7 796 aaKnown RBP20.11■□□□□ 0.81
RAB40C-206ENST00000561781 DDX23Q9BUQ8 820 aaKnown RBP20.11■□□□□ 0.81
RAB40C-206ENST00000561781 PLA2G12BQ9BX93 195 aa20.11■□□□□ 0.81
RAB40C-206ENST00000561781 SPATA16Q9BXB7 569 aa20.11■□□□□ 0.81
RAB40C-206ENST00000561781 KIAA1551Q9HCM1 1747 aa20.11■□□□□ 0.81
RAB40C-206ENST00000561781 LRRC53A6NM62 1247 aa20.11■□□□□ 0.81
RAB40C-206ENST00000561781 TJP3O95049 919 aa20.11■□□□□ 0.81
RAB40C-206ENST00000561781 YY1P25490 414 aa20.11■□□□□ 0.81
RAB40C-206ENST00000561781 VHLP40337 213 aa20.11■□□□□ 0.81
RAB40C-206ENST00000561781 CCDC15Q0P6D6 951 aa20.11■□□□□ 0.81
RAB40C-206ENST00000561781 PKN1Q16512 942 aa20.11■□□□□ 0.81
RAB40C-206ENST00000561781 KCTD19Q17RG1 926 aaPredicted RBP20.11■□□□□ 0.81
RAB40C-206ENST00000561781 SLC35B4Q969S0 331 aa20.11■□□□□ 0.81
RAB40C-206ENST00000561781 RHBDL2Q9NX52 303 aa20.11■□□□□ 0.81
RAB40C-206ENST00000561781 RPL26L1Q9UNX3 145 aaKnown RBP20.11■□□□□ 0.81
RAB40C-206ENST00000561781 CACNA1SQ13698 1873 aa20.1■□□□□ 0.81
RAB40C-206ENST00000561781 WTIPA6NIX2 430 aaPredicted RBP20.1■□□□□ 0.81
RAB40C-206ENST00000561781 CSF1RP07333 972 aa20.1■□□□□ 0.81
RAB40C-206ENST00000561781 MCAMP43121 646 aa20.1■□□□□ 0.81
RAB40C-206ENST00000561781 MEI1Q5TIA1 1274 aa20.1■□□□□ 0.81
RAB40C-206ENST00000561781 STAG2Q8N3U4 1231 aa20.1■□□□□ 0.81
RAB40C-206ENST00000561781 GIMAP8Q8ND71 665 aaPredicted RBP20.1■□□□□ 0.81
RAB40C-206ENST00000561781 HIC2Q96JB3 615 aa20.1■□□□□ 0.81
RAB40C-206ENST00000561781 RNF26Q9BY78 433 aaPredicted RBP20.1■□□□□ 0.81
RAB40C-206ENST00000561781 LRMDAQ9H2I8 198 aa20.1■□□□□ 0.81
RAB40C-206ENST00000561781 KLRG2A4D1S0 409 aaPredicted RBP20.1■□□□□ 0.81
RAB40C-206ENST00000561781 NUDT17P0C025 328 aa20.1■□□□□ 0.81
RAB40C-206ENST00000561781 EHHADHQ08426 723 aa20.1■□□□□ 0.81
RAB40C-206ENST00000561781 CBX3Q13185 183 aa20.1■□□□□ 0.81
RAB40C-206ENST00000561781 RRAGAQ7L523 313 aa20.1■□□□□ 0.81
RAB40C-206ENST00000561781 PROCA1Q8NCQ7 364 aaPredicted RBP20.1■□□□□ 0.81
RAB40C-206ENST00000561781 DCLRE1BQ9H816 532 aa20.1■□□□□ 0.81
RAB40C-206ENST00000561781 PCDH18Q9HCL0 1135 aa20.1■□□□□ 0.81
RAB40C-206ENST00000561781 NMRK1Q9NWW6 199 aa20.1■□□□□ 0.81
RAB40C-206ENST00000561781 ZNF532Q9HCE3 1301 aa20.09■□□□□ 0.81
RAB40C-206ENST00000561781 MYH3P11055 1940 aa20.09■□□□□ 0.81
RAB40C-206ENST00000561781 KLRC4O43908 158 aa20.09■□□□□ 0.81
RAB40C-206ENST00000561781 IDH1O75874 414 aaKnown RBP20.09■□□□□ 0.81
RAB40C-206ENST00000561781 AGTP01019 485 aa20.09■□□□□ 0.81
RAB40C-206ENST00000561781 KPNB1Q14974 876 aaKnown RBP20.09■□□□□ 0.81
RAB40C-206ENST00000561781 SF3B3Q15393 1217 aaKnown RBP20.09■□□□□ 0.81
RAB40C-206ENST00000561781 ASTE1Q2TB18 679 aaPredicted RBP20.09■□□□□ 0.81
RAB40C-206ENST00000561781 ANKRD40Q6AI12 368 aa20.09■□□□□ 0.81
RAB40C-206ENST00000561781 CCNJLQ8IV13 435 aa20.09■□□□□ 0.81
RAB40C-206ENST00000561781 ZNF654Q8IZM8 581 aa20.09■□□□□ 0.81
RAB40C-206ENST00000561781 SCFD2Q8WU76 684 aa20.09■□□□□ 0.81
RAB40C-206ENST00000561781 TAF4BQ92750 862 aa20.09■□□□□ 0.81
RAB40C-206ENST00000561781 STMN4Q9H169 189 aaPredicted RBP20.09■□□□□ 0.81
RAB40C-206ENST00000561781 CNNM2Q9H8M5 875 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms