RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 LSM12Q3MHD2 195 aaKnown RBP5.52□□□□□ -1.53
CASC4-211ENST00000561305 TTC38Q5R3I4 469 aa5.52□□□□□ -1.53
CASC4-211ENST00000561305 SPTY2D1Q68D10 685 aaPredicted RBP5.52□□□□□ -1.53
CASC4-211ENST00000561305 D2HGDHQ8N465 521 aa5.52□□□□□ -1.53
CASC4-211ENST00000561305 OR5AN1Q8NGI8 311 aa5.52□□□□□ -1.53
CASC4-211ENST00000561305 CACTINQ8WUQ7 758 aaKnown RBP5.52□□□□□ -1.53
CASC4-211ENST00000561305 NKD2Q969F2 451 aaPredicted RBP5.52□□□□□ -1.53
CASC4-211ENST00000561305 SLC7A6OSQ96CW6 309 aaPredicted RBP5.52□□□□□ -1.53
CASC4-211ENST00000561305 SLC6A15Q9H2J7 730 aa5.52□□□□□ -1.53
CASC4-211ENST00000561305 CABP5Q9NP86 173 aa5.52□□□□□ -1.53
CASC4-211ENST00000561305 KCMF1Q9P0J7 381 aa5.52□□□□□ -1.53
CASC4-211ENST00000561305 B4GALT6Q9UBX8 382 aa5.52□□□□□ -1.53
CASC4-211ENST00000561305 ING1Q9UK53 422 aaPredicted RBP5.52□□□□□ -1.53
CASC4-211ENST00000561305 DENND2AQ9ULE3 1009 aa5.52□□□□□ -1.53
CASC4-211ENST00000561305 UBA6A0AVT1 1052 aaPredicted RBP5.51□□□□□ -1.53
CASC4-211ENST00000561305 H7C1D1 291 aa5.51□□□□□ -1.53
CASC4-211ENST00000561305 CBX4O00257 560 aa5.51□□□□□ -1.53
CASC4-211ENST00000561305 RFPL3O75679 317 aa5.51□□□□□ -1.53
CASC4-211ENST00000561305 ZNF202O95125 648 aa5.51□□□□□ -1.53
CASC4-211ENST00000561305 SDSP20132 328 aa5.51□□□□□ -1.53
CASC4-211ENST00000561305 HHEXQ03014 270 aa5.51□□□□□ -1.53
CASC4-211ENST00000561305 EPHA7Q15375 998 aa5.51□□□□□ -1.53
CASC4-211ENST00000561305 SLFN12LQ6IEE8 588 aa5.51□□□□□ -1.53
CASC4-211ENST00000561305 SGMS1Q86VZ5 419 aa5.51□□□□□ -1.53
CASC4-211ENST00000561305 NME9Q86XW9 330 aa5.51□□□□□ -1.53
CASC4-211ENST00000561305 KIAA1958Q8N8K9 716 aa5.51□□□□□ -1.53
CASC4-211ENST00000561305 HAPLN2Q9GZV7 340 aa5.51□□□□□ -1.53
CASC4-211ENST00000561305 KANSL2Q9H9L4 492 aa5.51□□□□□ -1.53
CASC4-211ENST00000561305 TMEM260Q9NX78 707 aa5.51□□□□□ -1.53
CASC4-211ENST00000561305 MAGEL2Q9UJ55 1249 aa5.51□□□□□ -1.53
CASC4-211ENST00000561305 PPP1R12AO14974 1030 aaPredicted RBP5.5□□□□□ -1.53
CASC4-211ENST00000561305 STAT3P40763 770 aa5.5□□□□□ -1.53
CASC4-211ENST00000561305 ABHD18Q0P651 414 aa5.5□□□□□ -1.53
CASC4-211ENST00000561305 ZNF174Q15697 407 aa5.5□□□□□ -1.53
CASC4-211ENST00000561305 PIK3R6Q5UE93 754 aa5.5□□□□□ -1.53
CASC4-211ENST00000561305 CREB3L3Q68CJ9 461 aa5.5□□□□□ -1.53
CASC4-211ENST00000561305 CDCA2Q69YH5 1023 aaPredicted RBP5.5□□□□□ -1.53
CASC4-211ENST00000561305 THEMISQ8N1K5 641 aaPredicted RBP5.5□□□□□ -1.53
CASC4-211ENST00000561305 AMER2Q8N7J2 671 aa5.5□□□□□ -1.53
CASC4-211ENST00000561305 SH3TC2Q8TF17 1288 aa5.5□□□□□ -1.53
CASC4-211ENST00000561305 TMEM176AQ96HP8 235 aa5.5□□□□□ -1.53
CASC4-211ENST00000561305 MRFAP1L1Q96HT8 127 aa5.5□□□□□ -1.53
CASC4-211ENST00000561305 GPHA2Q96T91 129 aa5.5□□□□□ -1.53
CASC4-211ENST00000561305 ORAI3Q9BRQ5 295 aa5.5□□□□□ -1.53
CASC4-211ENST00000561305 CSRNP2Q9H175 543 aa5.5□□□□□ -1.53
CASC4-211ENST00000561305 PCIF1Q9H4Z3 704 aa5.5□□□□□ -1.53
CASC4-211ENST00000561305 SLITRK6Q9H5Y7 841 aa5.5□□□□□ -1.53
CASC4-211ENST00000561305 HECAQ9UBI9 543 aaPredicted RBP5.5□□□□□ -1.53
CASC4-211ENST00000561305 GIT1Q9Y2X7 761 aa5.5□□□□□ -1.53
CASC4-211ENST00000561305 SH3BP1Q9Y3L3 701 aa5.5□□□□□ -1.53
CASC4-211ENST00000561305 A0A1W2PRX2 142 aa5.49□□□□□ -1.53
CASC4-211ENST00000561305 CAPN14A8MX76 684 aa5.49□□□□□ -1.53
CASC4-211ENST00000561305 CYP27B1O15528 508 aa5.49□□□□□ -1.53
CASC4-211ENST00000561305 FLT3P36888 993 aa5.49□□□□□ -1.53
CASC4-211ENST00000561305 RANGAP1P46060 587 aaPredicted RBP5.49□□□□□ -1.53
CASC4-211ENST00000561305 ADCY1Q08828 1119 aa5.49□□□□□ -1.53
CASC4-211ENST00000561305 FHL2Q14192 279 aa5.49□□□□□ -1.53
CASC4-211ENST00000561305 ACAP1Q15027 740 aa5.49□□□□□ -1.53
CASC4-211ENST00000561305 UBE2R2Q712K3 238 aaPredicted RBP5.49□□□□□ -1.53
CASC4-211ENST00000561305 BMP8AQ7Z5Y6 402 aa5.49□□□□□ -1.53
CASC4-211ENST00000561305 CLEC14AQ86T13 490 aa5.49□□□□□ -1.53
CASC4-211ENST00000561305 TMPRSS6Q8IU80 811 aa5.49□□□□□ -1.53
CASC4-211ENST00000561305 GCDHQ92947 438 aaPredicted RBP5.49□□□□□ -1.53
CASC4-211ENST00000561305 PLEKHG4BQ96PX9 1271 aa5.49□□□□□ -1.53
CASC4-211ENST00000561305 TUBGCP5Q96RT8 1024 aa5.49□□□□□ -1.53
CASC4-211ENST00000561305 CEP72Q9P209 647 aa5.49□□□□□ -1.53
CASC4-211ENST00000561305 JMJD7P0C870 316 aa5.48□□□□□ -1.53
CASC4-211ENST00000561305 PTX3P26022 381 aaPredicted RBP5.48□□□□□ -1.53
CASC4-211ENST00000561305 MCM7P33993 719 aa5.48□□□□□ -1.53
CASC4-211ENST00000561305 BCAR1P56945 870 aa5.48□□□□□ -1.53
CASC4-211ENST00000561305 BPIFB4P59827 614 aa5.48□□□□□ -1.53
CASC4-211ENST00000561305 TGFB2P61812 414 aa5.48□□□□□ -1.53
CASC4-211ENST00000561305 PABPC4Q13310 644 aaKnown RBP eCLIP5.48□□□□□ -1.53
CASC4-211ENST00000561305 TUBA3CQ13748 450 aa5.48□□□□□ -1.53
CASC4-211ENST00000561305 GAGE13Q4V321 117 aa5.48□□□□□ -1.53
CASC4-211ENST00000561305 FNDC7Q5VTL7 733 aa5.48□□□□□ -1.53
CASC4-211ENST00000561305 TUBA3EQ6PEY2 450 aa5.48□□□□□ -1.53
CASC4-211ENST00000561305 KANSL1Q7Z3B3 1105 aa5.48□□□□□ -1.53
CASC4-211ENST00000561305 ANKRD35Q8N283 1001 aa5.48□□□□□ -1.53
CASC4-211ENST00000561305 RPL10LQ96L21 214 aaKnown RBP5.48□□□□□ -1.53
CASC4-211ENST00000561305 ELF4Q99607 663 aaPredicted RBP5.48□□□□□ -1.53
CASC4-211ENST00000561305 MENTQ9BUN1 341 aa5.48□□□□□ -1.53
CASC4-211ENST00000561305 INTS7Q9NVH2 962 aaKnown RBP5.48□□□□□ -1.53
CASC4-211ENST00000561305 POLR3BQ9NW08 1133 aaPredicted RBP5.48□□□□□ -1.53
CASC4-211ENST00000561305 SPO11Q9Y5K1 396 aa5.48□□□□□ -1.53
CASC4-211ENST00000561305 RBM8AQ9Y5S9 174 aaKnown RBP5.48□□□□□ -1.53
CASC4-211ENST00000561305 SLC9A1P19634 815 aa5.47□□□□□ -1.53
CASC4-211ENST00000561305 TCIRG1Q13488 830 aa5.47□□□□□ -1.53
CASC4-211ENST00000561305 RRP1BQ14684 758 aaKnown RBP5.47□□□□□ -1.53
CASC4-211ENST00000561305 MYBPC3Q14896 1274 aa5.47□□□□□ -1.53
CASC4-211ENST00000561305 CFAP100Q494V2 611 aa5.47□□□□□ -1.53
CASC4-211ENST00000561305 PRAMEF9Q5VWM5 478 aa5.47□□□□□ -1.53
CASC4-211ENST00000561305 ESRP1Q6NXG1 681 aaKnown RBP5.47□□□□□ -1.53
CASC4-211ENST00000561305 KIF18BQ86Y91 864 aa5.47□□□□□ -1.53
CASC4-211ENST00000561305 SYNPOQ8N3V7 929 aa5.47□□□□□ -1.53
CASC4-211ENST00000561305 ANKRD53Q8N9V6 530 aa5.47□□□□□ -1.53
CASC4-211ENST00000561305 PLA2G15Q8NCC3 412 aa5.47□□□□□ -1.53
CASC4-211ENST00000561305 RPGRQ92834 1020 aaKnown RBP5.47□□□□□ -1.53
CASC4-211ENST00000561305 DYDC2Q96IM9 177 aa5.47□□□□□ -1.53
CASC4-211ENST00000561305 WDR92Q96MX6 357 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms