RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 DARSP14868 501 aaKnown RBP18.25■□□□□ 0.51
SNX1-213ENST00000561026 ZSCAN20P17040 1043 aaPredicted RBP18.25■□□□□ 0.51
SNX1-213ENST00000561026 UBE3AQ05086 875 aa18.25■□□□□ 0.51
SNX1-213ENST00000561026 ZP2Q05996 745 aa18.25■□□□□ 0.51
SNX1-213ENST00000561026 ADGRD2Q7Z7M1 963 aa18.25■□□□□ 0.51
SNX1-213ENST00000561026 CEP89Q96ST8 783 aa18.25■□□□□ 0.51
SNX1-213ENST00000561026 C11orf16Q9NQ32 467 aa18.25■□□□□ 0.51
SNX1-213ENST00000561026 SEPT9Q9UHD8 586 aaPredicted RBP18.25■□□□□ 0.51
SNX1-213ENST00000561026 WDR81Q562E7 1941 aa18.25■□□□□ 0.51
SNX1-213ENST00000561026 SLC37A4O43826 429 aa18.24■□□□□ 0.51
SNX1-213ENST00000561026 PFKFB2O60825 505 aa18.24■□□□□ 0.51
SNX1-213ENST00000561026 FGF18O76093 207 aa18.24■□□□□ 0.51
SNX1-213ENST00000561026 CDC42EP1Q00587 391 aa18.24■□□□□ 0.51
SNX1-213ENST00000561026 DRP2Q13474 957 aa18.24■□□□□ 0.51
SNX1-213ENST00000561026 SMAD2Q15796 467 aaKnown RBP18.24■□□□□ 0.51
SNX1-213ENST00000561026 CLUL1Q15846 466 aa18.24■□□□□ 0.51
SNX1-213ENST00000561026 CSPP1Q1MSJ5 1256 aa18.24■□□□□ 0.51
SNX1-213ENST00000561026 LETM2Q2VYF4 491 aa18.24■□□□□ 0.51
SNX1-213ENST00000561026 MTERF2Q49AM1 385 aa18.24■□□□□ 0.51
SNX1-213ENST00000561026 ADHFE1Q8IWW8 467 aa18.24■□□□□ 0.51
SNX1-213ENST00000561026 EFHBQ8N7U6 833 aa18.24■□□□□ 0.51
SNX1-213ENST00000561026 SCLT1Q96NL6 688 aa18.24■□□□□ 0.51
SNX1-213ENST00000561026 TMEM117Q9H0C3 514 aa18.24■□□□□ 0.51
SNX1-213ENST00000561026 CWH43Q9H720 699 aa18.24■□□□□ 0.51
SNX1-213ENST00000561026 HCSTQ9UBK5 93 aa18.24■□□□□ 0.51
SNX1-213ENST00000561026 STK36Q9NRP7 1315 aa18.24■□□□□ 0.51
SNX1-213ENST00000561026 KIAA1671Q9BY89 1806 aa18.24■□□□□ 0.51
SNX1-213ENST00000561026 IGKV6-21A0A0C4DH24 114 aa18.23■□□□□ 0.51
SNX1-213ENST00000561026 CCDC194A0A1B0GVG4 234 aa18.23■□□□□ 0.51
SNX1-213ENST00000561026 TMEM150BA6NC51 233 aa18.23■□□□□ 0.51
SNX1-213ENST00000561026 C19orf67A6NJJ6 358 aa18.23■□□□□ 0.51
SNX1-213ENST00000561026 HOXA2O43364 376 aa18.23■□□□□ 0.51
SNX1-213ENST00000561026 MBTPS2O43462 519 aa18.23■□□□□ 0.51
SNX1-213ENST00000561026 XBP1P17861 261 aa18.23■□□□□ 0.51
SNX1-213ENST00000561026 NRIP1P48552 1158 aa18.23■□□□□ 0.51
SNX1-213ENST00000561026 ANAPC15P60006 121 aa18.23■□□□□ 0.51
SNX1-213ENST00000561026 NEK8Q86SG6 692 aa18.23■□□□□ 0.51
SNX1-213ENST00000561026 ECHDC2Q86YB7 292 aa18.23■□□□□ 0.51
SNX1-213ENST00000561026 THNSL1Q8IYQ7 743 aa18.23■□□□□ 0.51
SNX1-213ENST00000561026 COLGALT1Q8NBJ5 622 aa18.23■□□□□ 0.51
SNX1-213ENST00000561026 MICAL1Q8TDZ2 1067 aa18.23■□□□□ 0.51
SNX1-213ENST00000561026 NLRP7Q8WX94 980 aa18.23■□□□□ 0.51
SNX1-213ENST00000561026 FAM20AQ96MK3 541 aa18.23■□□□□ 0.51
SNX1-213ENST00000561026 CASD1Q96PB1 797 aa18.23■□□□□ 0.51
SNX1-213ENST00000561026 SH2D3AQ9BRG2 576 aa18.23■□□□□ 0.51
SNX1-213ENST00000561026 RNF19AQ9NV58 838 aa18.23■□□□□ 0.51
SNX1-213ENST00000561026 CD207Q9UJ71 328 aa18.23■□□□□ 0.51
SNX1-213ENST00000561026 PCDHGC5Q9Y5F6 944 aa18.23■□□□□ 0.51
SNX1-213ENST00000561026 FNDC1Q4ZHG4 1894 aaPredicted RBP18.23■□□□□ 0.51
SNX1-213ENST00000561026 A0A0U1RQF3 1178 aa18.22■□□□□ 0.51
SNX1-213ENST00000561026 DDX11L8A8MPP1 907 aa18.22■□□□□ 0.51
SNX1-213ENST00000561026 EML1O00423 815 aa18.22■□□□□ 0.51
SNX1-213ENST00000561026 ALADP13716 330 aa18.22■□□□□ 0.51
SNX1-213ENST00000561026 LAG3P18627 525 aa18.22■□□□□ 0.51
SNX1-213ENST00000561026 NDUFV1P49821 464 aa18.22■□□□□ 0.51
SNX1-213ENST00000561026 DNM2P50570 870 aa18.22■□□□□ 0.51
SNX1-213ENST00000561026 PSMC5P62195 406 aa18.22■□□□□ 0.51
SNX1-213ENST00000561026 SMAD4Q13485 552 aaKnown RBP18.22■□□□□ 0.51
SNX1-213ENST00000561026 PPP4R3AQ6IN85 833 aa18.22■□□□□ 0.51
SNX1-213ENST00000561026 LRRC55Q6ZSA7 311 aa18.22■□□□□ 0.51
SNX1-213ENST00000561026 RBM23Q86U06 439 aaKnown RBP18.22■□□□□ 0.51
SNX1-213ENST00000561026 MSLNLQ96KJ4 702 aa18.22■□□□□ 0.51
SNX1-213ENST00000561026 GCOM2Q9BZD3 368 aaPredicted RBP18.22■□□□□ 0.51
SNX1-213ENST00000561026 KCNMB3Q9NPA1 279 aa18.22■□□□□ 0.51
SNX1-213ENST00000561026 TLR9Q9NR96 1032 aa18.22■□□□□ 0.51
SNX1-213ENST00000561026 GJB4Q9NTQ9 266 aa18.22■□□□□ 0.51
SNX1-213ENST00000561026 PPP4R2Q9NY27 417 aa18.22■□□□□ 0.51
SNX1-213ENST00000561026 CLEC1BQ9P126 229 aa18.22■□□□□ 0.51
SNX1-213ENST00000561026 FAM86C2PA6NEL3 165 aa18.21■□□□□ 0.51
SNX1-213ENST00000561026 CSDE1O75534 798 aaKnown RBP18.21■□□□□ 0.51
SNX1-213ENST00000561026 CTDNEP1O95476 244 aa18.21■□□□□ 0.51
SNX1-213ENST00000561026 GCFC2P16383 781 aaKnown RBP18.21■□□□□ 0.51
SNX1-213ENST00000561026 FGFR4P22455 802 aa18.21■□□□□ 0.51
SNX1-213ENST00000561026 PPP2R5CQ13362 524 aa18.21■□□□□ 0.51
SNX1-213ENST00000561026 ANKRD1Q15327 319 aa18.21■□□□□ 0.51
SNX1-213ENST00000561026 ANO5Q75V66 913 aa18.21■□□□□ 0.51
SNX1-213ENST00000561026 ABI1Q8IZP0 508 aa18.21■□□□□ 0.51
SNX1-213ENST00000561026 OXER1Q8TDS5 423 aa18.21■□□□□ 0.51
SNX1-213ENST00000561026 TLE6Q9H808 572 aa18.21■□□□□ 0.51
SNX1-213ENST00000561026 VAV3Q9UKW4 847 aa18.21■□□□□ 0.51
SNX1-213ENST00000561026 DTNBO60941 627 aa18.2■□□□□ 0.5
SNX1-213ENST00000561026 MAFO75444 373 aaPredicted RBP18.2■□□□□ 0.5
SNX1-213ENST00000561026 EYA4O95677 639 aa18.2■□□□□ 0.5
SNX1-213ENST00000561026 EOMESO95936 686 aa18.2■□□□□ 0.5
SNX1-213ENST00000561026 QARSP47897 775 aaKnown RBP18.2■□□□□ 0.5
SNX1-213ENST00000561026 AK2P54819 239 aa18.2■□□□□ 0.5
SNX1-213ENST00000561026 ERVFC1P60507 584 aa18.2■□□□□ 0.5
SNX1-213ENST00000561026 PLCB3Q01970 1234 aa18.2■□□□□ 0.5
SNX1-213ENST00000561026 COASYQ13057 564 aa18.2■□□□□ 0.5
SNX1-213ENST00000561026 PDE12Q6L8Q7 609 aaKnown RBP18.2■□□□□ 0.5
SNX1-213ENST00000561026 PIK3AP1Q6ZUJ8 805 aa18.2■□□□□ 0.5
SNX1-213ENST00000561026 ZNF598Q86UK7 904 aaKnown RBP18.2■□□□□ 0.5
SNX1-213ENST00000561026 LRRC43Q8N309 656 aa18.2■□□□□ 0.5
SNX1-213ENST00000561026 RNF169Q8NCN4 708 aa18.2■□□□□ 0.5
SNX1-213ENST00000561026 CHST12Q9NRB3 414 aa18.2■□□□□ 0.5
SNX1-213ENST00000561026 DACT1Q9NYF0 836 aa18.2■□□□□ 0.5
SNX1-213ENST00000561026 SUCLA2Q9P2R7 463 aaPredicted RBP18.2■□□□□ 0.5
SNX1-213ENST00000561026 ORC3Q9UBD5 711 aaPredicted RBP18.2■□□□□ 0.5
SNX1-213ENST00000561026 LZTS1Q9Y250 596 aa18.2■□□□□ 0.5
SNX1-213ENST00000561026 A0A087WZ62 844 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms