RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 THG1LQ9NWX6 298 aaKnown RBP6.3□□□□□ -1.4
PSMA4-221ENST00000560842 UCKL1Q9NWZ5 548 aa6.3□□□□□ -1.4
PSMA4-221ENST00000560842 ADAM29Q9UKF5 820 aa6.3□□□□□ -1.4
PSMA4-221ENST00000560842 ZEB2O60315 1214 aa6.29□□□□□ -1.4
PSMA4-221ENST00000560842 FBXO21O94952 628 aa6.29□□□□□ -1.4
PSMA4-221ENST00000560842 FKBP9O95302 570 aa6.29□□□□□ -1.4
PSMA4-221ENST00000560842 PRLP01236 227 aa6.29□□□□□ -1.4
PSMA4-221ENST00000560842 KPNA1P52294 538 aaPredicted RBP6.29□□□□□ -1.4
PSMA4-221ENST00000560842 DPTQ07507 201 aa6.29□□□□□ -1.4
PSMA4-221ENST00000560842 ADCY1Q08828 1119 aa6.29□□□□□ -1.4
PSMA4-221ENST00000560842 IGFL4Q6B9Z1 124 aa6.29□□□□□ -1.4
PSMA4-221ENST00000560842 LRSAM1Q6UWE0 723 aa6.29□□□□□ -1.4
PSMA4-221ENST00000560842 ZNF662Q6ZS27 426 aa6.29□□□□□ -1.4
PSMA4-221ENST00000560842 FKBP9P1Q75LS8 142 aa6.29□□□□□ -1.4
PSMA4-221ENST00000560842 ZZZ3Q8IYH5 903 aa6.29□□□□□ -1.4
PSMA4-221ENST00000560842 AJUBAQ96IF1 538 aa6.29□□□□□ -1.4
PSMA4-221ENST00000560842 KATNBL1Q9H079 304 aa6.29□□□□□ -1.4
PSMA4-221ENST00000560842 SEC61A2Q9H9S3 476 aa6.29□□□□□ -1.4
PSMA4-221ENST00000560842 SPTLC3Q9NUV7 552 aa6.29□□□□□ -1.4
PSMA4-221ENST00000560842 H0Y858 1186 aa6.28□□□□□ -1.4
PSMA4-221ENST00000560842 FOXS1O43638 330 aa6.28□□□□□ -1.4
PSMA4-221ENST00000560842 CANXP27824 592 aaKnown RBP6.28□□□□□ -1.4
PSMA4-221ENST00000560842 TRMT10BQ6PF06 316 aaKnown RBP6.28□□□□□ -1.4
PSMA4-221ENST00000560842 REXO1L1PQ8IX06 675 aa6.28□□□□□ -1.4
PSMA4-221ENST00000560842 HIPK4Q8NE63 616 aa6.28□□□□□ -1.4
PSMA4-221ENST00000560842 NUDT10Q8NFP7 164 aa6.28□□□□□ -1.4
PSMA4-221ENST00000560842 CALML6Q8TD86 181 aa6.28□□□□□ -1.4
PSMA4-221ENST00000560842 NUDT11Q96G61 164 aa6.28□□□□□ -1.4
PSMA4-221ENST00000560842 MAML3Q96JK9 1138 aa6.28□□□□□ -1.4
PSMA4-221ENST00000560842 IKZF4Q9H2S9 585 aa6.28□□□□□ -1.4
PSMA4-221ENST00000560842 IFT22Q9H7X7 185 aa6.28□□□□□ -1.4
PSMA4-221ENST00000560842 SPC25Q9HBM1 224 aa6.28□□□□□ -1.4
PSMA4-221ENST00000560842 EMC7Q9NPA0 242 aa6.28□□□□□ -1.4
PSMA4-221ENST00000560842 FBXO10Q9UK96 956 aa6.28□□□□□ -1.4
PSMA4-221ENST00000560842 NEMP1O14524 444 aa6.27□□□□□ -1.41
PSMA4-221ENST00000560842 NARSO43776 548 aaKnown RBP6.27□□□□□ -1.41
PSMA4-221ENST00000560842 CUTAO60888 179 aa6.27□□□□□ -1.41
PSMA4-221ENST00000560842 CNOT4O95628 575 aaKnown RBP6.27□□□□□ -1.41
PSMA4-221ENST00000560842 TOP3AQ13472 1001 aaPredicted RBP6.27□□□□□ -1.41
PSMA4-221ENST00000560842 SART3Q15020 963 aaKnown RBP6.27□□□□□ -1.41
PSMA4-221ENST00000560842 TERF2Q15554 542 aa6.27□□□□□ -1.41
PSMA4-221ENST00000560842 TMEM200BQ69YZ2 307 aa6.27□□□□□ -1.41
PSMA4-221ENST00000560842 TCTN3Q6NUS6 607 aa6.27□□□□□ -1.41
PSMA4-221ENST00000560842 Q6ZUG5 572 aa6.27□□□□□ -1.41
PSMA4-221ENST00000560842 KANSL1Q7Z3B3 1105 aa6.27□□□□□ -1.41
PSMA4-221ENST00000560842 PASD1Q8IV76 773 aa6.27□□□□□ -1.41
PSMA4-221ENST00000560842 UBR7Q8N806 425 aa6.27□□□□□ -1.41
PSMA4-221ENST00000560842 ZNF610Q8N9Z0 462 aa6.27□□□□□ -1.41
PSMA4-221ENST00000560842 TOMM22Q9NS69 142 aa6.27□□□□□ -1.41
PSMA4-221ENST00000560842 USP36Q9P275 1121 aaKnown RBP6.27□□□□□ -1.41
PSMA4-221ENST00000560842 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.27□□□□□ -1.41
PSMA4-221ENST00000560842 LOC105371045A0A1W2PR82 267 aa6.26□□□□□ -1.41
PSMA4-221ENST00000560842 UBA6A0AVT1 1052 aaPredicted RBP6.26□□□□□ -1.41
PSMA4-221ENST00000560842 BRINP1O60477 761 aa6.26□□□□□ -1.41
PSMA4-221ENST00000560842 DNAJC6O75061 913 aa6.26□□□□□ -1.41
PSMA4-221ENST00000560842 ZNF202O95125 648 aa6.26□□□□□ -1.41
PSMA4-221ENST00000560842 CD40P25942 277 aa6.26□□□□□ -1.41
PSMA4-221ENST00000560842 POLD1P28340 1107 aa6.26□□□□□ -1.41
PSMA4-221ENST00000560842 EIF4HQ15056 248 aaKnown RBP6.26□□□□□ -1.41
PSMA4-221ENST00000560842 NRN1LQ496H8 165 aa6.26□□□□□ -1.41
PSMA4-221ENST00000560842 TTC38Q5R3I4 469 aa6.26□□□□□ -1.41
PSMA4-221ENST00000560842 EDAQ92838 391 aa6.26□□□□□ -1.41
PSMA4-221ENST00000560842 GPR101Q96P66 508 aaPredicted RBP6.26□□□□□ -1.41
PSMA4-221ENST00000560842 GNRHR2Q96P88 292 aa6.26□□□□□ -1.41
PSMA4-221ENST00000560842 ADOQ96SZ5 270 aa6.26□□□□□ -1.41
PSMA4-221ENST00000560842 TTC1Q99614 292 aa6.26□□□□□ -1.41
PSMA4-221ENST00000560842 ZDHHC5Q9C0B5 715 aa6.26□□□□□ -1.41
PSMA4-221ENST00000560842 APEX1P27695 318 aaKnown RBP6.25□□□□□ -1.41
PSMA4-221ENST00000560842 LSP1P33241 339 aa6.25□□□□□ -1.41
PSMA4-221ENST00000560842 IL2P60568 153 aa6.25□□□□□ -1.41
PSMA4-221ENST00000560842 ROM1Q03395 351 aa6.25□□□□□ -1.41
PSMA4-221ENST00000560842 MOGSQ13724 837 aa6.25□□□□□ -1.41
PSMA4-221ENST00000560842 USP39Q53GS9 565 aaKnown RBP6.25□□□□□ -1.41
PSMA4-221ENST00000560842 RNF187Q5TA31 235 aaPredicted RBP6.25□□□□□ -1.41
PSMA4-221ENST00000560842 PHYKPLQ8IUZ5 450 aa6.25□□□□□ -1.41
PSMA4-221ENST00000560842 USP7Q93009 1102 aa6.25□□□□□ -1.41
PSMA4-221ENST00000560842 TRIM8Q9BZR9 551 aa6.25□□□□□ -1.41
PSMA4-221ENST00000560842 HAPLN2Q9GZV7 340 aa6.25□□□□□ -1.41
PSMA4-221ENST00000560842 APOBEC2Q9Y235 224 aaKnown RBP6.25□□□□□ -1.41
PSMA4-221ENST00000560842 SLC4A7Q9Y6M7 1214 aa6.25□□□□□ -1.41
PSMA4-221ENST00000560842 PLSCR1O15162 318 aa6.24□□□□□ -1.41
PSMA4-221ENST00000560842 CSF2RBP32927 897 aa6.24□□□□□ -1.41
PSMA4-221ENST00000560842 MCM7P33993 719 aa6.24□□□□□ -1.41
PSMA4-221ENST00000560842 ETV4P43268 484 aa6.24□□□□□ -1.41
PSMA4-221ENST00000560842 CD83Q01151 205 aa6.24□□□□□ -1.41
PSMA4-221ENST00000560842 SLC6A3Q01959 620 aa6.24□□□□□ -1.41
PSMA4-221ENST00000560842 STRN3Q13033 797 aa6.24□□□□□ -1.41
PSMA4-221ENST00000560842 MYBPC3Q14896 1274 aa6.24□□□□□ -1.41
PSMA4-221ENST00000560842 TRIM68Q6AZZ1 485 aa6.24□□□□□ -1.41
PSMA4-221ENST00000560842 FILIP1Q7Z7B0 1213 aa6.24□□□□□ -1.41
PSMA4-221ENST00000560842 C11orf74Q86VG3 221 aa6.24□□□□□ -1.41
PSMA4-221ENST00000560842 BCL6BQ8N143 479 aaPredicted RBP6.24□□□□□ -1.41
PSMA4-221ENST00000560842 LMF1Q96S06 567 aa6.24□□□□□ -1.41
PSMA4-221ENST00000560842 FAM126AQ9BYI3 521 aaPredicted RBP6.24□□□□□ -1.41
PSMA4-221ENST00000560842 WDR26Q9H7D7 661 aa6.24□□□□□ -1.41
PSMA4-221ENST00000560842 ZFR2Q9UPR6 939 aaKnown RBP6.24□□□□□ -1.41
PSMA4-221ENST00000560842 ID4P47928 161 aa6.23□□□□□ -1.41
PSMA4-221ENST00000560842 RGS3P49796 1198 aa6.23□□□□□ -1.41
PSMA4-221ENST00000560842 NANOS3P60323 173 aaKnown RBP6.23□□□□□ -1.41
PSMA4-221ENST00000560842 PTH1RQ03431 593 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms