RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 OATP04181 439 aa14.16□□□□□ -0.14
SNX1-211ENST00000560829 CCDC175P0C221 793 aa14.16□□□□□ -0.14
SNX1-211ENST00000560829 XRCC5P13010 732 aaKnown RBP14.16□□□□□ -0.14
SNX1-211ENST00000560829 CASP4P49662 377 aa14.16□□□□□ -0.14
SNX1-211ENST00000560829 KCNH2Q12809 1159 aa14.16□□□□□ -0.14
SNX1-211ENST00000560829 TSR1Q2NL82 804 aaKnown RBP14.16□□□□□ -0.14
SNX1-211ENST00000560829 ZNF792Q3KQV3 632 aa14.16□□□□□ -0.14
SNX1-211ENST00000560829 WDR78Q5VTH9 848 aa14.16□□□□□ -0.14
SNX1-211ENST00000560829 CCDC62Q6P9F0 684 aa14.16□□□□□ -0.14
SNX1-211ENST00000560829 WDR59Q6PJI9 974 aa14.16□□□□□ -0.14
SNX1-211ENST00000560829 KSR1Q8IVT5 923 aa14.16□□□□□ -0.14
SNX1-211ENST00000560829 SEPT1Q8WYJ6 367 aa14.16□□□□□ -0.14
SNX1-211ENST00000560829 KCNN1Q92952 543 aa14.16□□□□□ -0.14
SNX1-211ENST00000560829 PCYT2Q99447 389 aa14.16□□□□□ -0.14
SNX1-211ENST00000560829 PARK7Q99497 189 aaKnown RBP14.16□□□□□ -0.14
SNX1-211ENST00000560829 NIFKQ9BYG3 293 aaKnown RBP14.16□□□□□ -0.14
SNX1-211ENST00000560829 IKZF4Q9H2S9 585 aa14.16□□□□□ -0.14
SNX1-211ENST00000560829 EPHB6O15197 1021 aa14.16□□□□□ -0.14
SNX1-211ENST00000560829 ARIH2O95376 493 aa14.16□□□□□ -0.14
SNX1-211ENST00000560829 AFPP02771 609 aaKnown RBP14.16□□□□□ -0.14
SNX1-211ENST00000560829 SMTNP53814 917 aa14.16□□□□□ -0.14
SNX1-211ENST00000560829 PEX3P56589 373 aa14.16□□□□□ -0.14
SNX1-211ENST00000560829 MKRN3Q13064 507 aaKnown RBP14.16□□□□□ -0.14
SNX1-211ENST00000560829 DMP1Q13316 513 aaPredicted RBP14.16□□□□□ -0.14
SNX1-211ENST00000560829 ANKRD13CQ8N6S4 541 aa14.16□□□□□ -0.14
SNX1-211ENST00000560829 TMEM161BQ8NDZ6 487 aa14.16□□□□□ -0.14
SNX1-211ENST00000560829 SLC35C1Q96A29 364 aa14.16□□□□□ -0.14
SNX1-211ENST00000560829 CEP89Q96ST8 783 aa14.16□□□□□ -0.14
SNX1-211ENST00000560829 PTPN18Q99952 460 aa14.16□□□□□ -0.14
SNX1-211ENST00000560829 MMRN2Q9H8L6 949 aa14.16□□□□□ -0.14
SNX1-211ENST00000560829 ATP6V0A4Q9HBG4 840 aa14.16□□□□□ -0.14
SNX1-211ENST00000560829 NMRK2Q9NPI5 230 aa14.16□□□□□ -0.14
SNX1-211ENST00000560829 FAM207AQ9NSI2 230 aaPredicted RBP14.16□□□□□ -0.14
SNX1-211ENST00000560829 KCNG1Q9UIX4 513 aa14.16□□□□□ -0.14
SNX1-211ENST00000560829 PLAGL2Q9UPG8 496 aa14.16□□□□□ -0.14
SNX1-211ENST00000560829 PPME1Q9Y570 386 aa14.16□□□□□ -0.14
SNX1-211ENST00000560829 PAXBP1Q9Y5B6 917 aa14.16□□□□□ -0.14
SNX1-211ENST00000560829 SORBS3O60504 671 aa14.15□□□□□ -0.14
SNX1-211ENST00000560829 NPTX2P47972 431 aa14.15□□□□□ -0.14
SNX1-211ENST00000560829 LY6KQ17RY6 165 aa14.15□□□□□ -0.14
SNX1-211ENST00000560829 CELF3Q5SZQ8 465 aaKnown RBP14.15□□□□□ -0.14
SNX1-211ENST00000560829 FAM160B1Q5W0V3 765 aa14.15□□□□□ -0.14
SNX1-211ENST00000560829 EEPD1Q7L9B9 569 aa14.15□□□□□ -0.14
SNX1-211ENST00000560829 TRMT1LQ7Z2T5 733 aaKnown RBP14.15□□□□□ -0.14
SNX1-211ENST00000560829 ZNF467Q7Z7K2 595 aaPredicted RBP14.15□□□□□ -0.14
SNX1-211ENST00000560829 MAP4K3Q8IVH8 894 aa14.15□□□□□ -0.14
SNX1-211ENST00000560829 FAM186BQ8IYM0 893 aa14.15□□□□□ -0.14
SNX1-211ENST00000560829 SYCP3Q8IZU3 236 aa14.15□□□□□ -0.14
SNX1-211ENST00000560829 CCDC155Q8N6L0 562 aa14.15□□□□□ -0.14
SNX1-211ENST00000560829 NEK11Q8NG66 645 aa14.15□□□□□ -0.14
SNX1-211ENST00000560829 BAP1Q92560 729 aa14.15□□□□□ -0.14
SNX1-211ENST00000560829 DHX33Q9H6R0 707 aaKnown RBP14.15□□□□□ -0.14
SNX1-211ENST00000560829 MLXIPQ9HAP2 919 aa14.15□□□□□ -0.14
SNX1-211ENST00000560829 ZNHIT6Q9NWK9 470 aaKnown RBP14.15□□□□□ -0.14
SNX1-211ENST00000560829 GTPBP10A4D1E9 387 aaKnown RBP14.14□□□□□ -0.15
SNX1-211ENST00000560829 SLC16A4O15374 487 aa14.14□□□□□ -0.15
SNX1-211ENST00000560829 SCP2P22307 547 aa14.14□□□□□ -0.15
SNX1-211ENST00000560829 ABCD1P33897 745 aa14.14□□□□□ -0.15
SNX1-211ENST00000560829 STAT5BP51692 787 aa14.14□□□□□ -0.15
SNX1-211ENST00000560829 MCCD1P59942 119 aaPredicted RBP14.14□□□□□ -0.15
SNX1-211ENST00000560829 PPP2R5AQ15172 486 aa14.14□□□□□ -0.15
SNX1-211ENST00000560829 TARBP2Q15633 366 aaKnown RBP14.14□□□□□ -0.15
SNX1-211ENST00000560829 FAM110CQ1W6H9 321 aa14.14□□□□□ -0.15
SNX1-211ENST00000560829 CHADLQ6NUI6 762 aa14.14□□□□□ -0.15
SNX1-211ENST00000560829 CHP1Q99653 195 aa14.14□□□□□ -0.15
SNX1-211ENST00000560829 GPR20Q99678 358 aa14.14□□□□□ -0.15
SNX1-211ENST00000560829 DESI2Q9BSY9 194 aa14.14□□□□□ -0.15
SNX1-211ENST00000560829 CEP72Q9P209 647 aa14.14□□□□□ -0.15
SNX1-211ENST00000560829 EXOC7Q9UPT5 735 aa14.14□□□□□ -0.15
SNX1-211ENST00000560829 FRMD4BQ9Y2L6 1034 aa14.14□□□□□ -0.15
SNX1-211ENST00000560829 LGR5O75473 907 aa14.14□□□□□ -0.15
SNX1-211ENST00000560829 NOL4O94818 638 aa14.14□□□□□ -0.15
SNX1-211ENST00000560829 ADORA2AP29274 412 aa14.14□□□□□ -0.15
SNX1-211ENST00000560829 TCF7P36402 384 aaPredicted RBP14.14□□□□□ -0.15
SNX1-211ENST00000560829 RFC5P40937 340 aa14.14□□□□□ -0.15
SNX1-211ENST00000560829 ETF1P62495 437 aaKnown RBP14.14□□□□□ -0.15
SNX1-211ENST00000560829 MTERF2Q49AM1 385 aa14.14□□□□□ -0.15
SNX1-211ENST00000560829 TRIM65Q6PJ69 517 aa14.14□□□□□ -0.15
SNX1-211ENST00000560829 FBXO16Q8IX29 292 aaPredicted RBP14.14□□□□□ -0.15
SNX1-211ENST00000560829 CCDC170Q8IYT3 715 aa14.14□□□□□ -0.15
SNX1-211ENST00000560829 BSNDQ8WZ55 320 aa14.14□□□□□ -0.15
SNX1-211ENST00000560829 FAM167AQ96KS9 214 aa14.14□□□□□ -0.15
SNX1-211ENST00000560829 NUCKS1Q9H1E3 243 aaKnown RBP14.14□□□□□ -0.15
SNX1-211ENST00000560829 PLCB1Q9NQ66 1216 aa14.14□□□□□ -0.15
SNX1-211ENST00000560829 NRBP2Q9NSY0 501 aa14.14□□□□□ -0.15
SNX1-211ENST00000560829 TBX20Q9UMR3 447 aa14.14□□□□□ -0.15
SNX1-211ENST00000560829 DIS3Q9Y2L1 958 aaKnown RBP14.14□□□□□ -0.15
SNX1-211ENST00000560829 EPN1Q9Y6I3 576 aaPredicted RBP14.14□□□□□ -0.15
SNX1-211ENST00000560829 RBM47A0AV96 593 aaKnown RBP14.13□□□□□ -0.15
SNX1-211ENST00000560829 H0YCG3 227 aa14.13□□□□□ -0.15
SNX1-211ENST00000560829 MAPK13O15264 365 aa14.13□□□□□ -0.15
SNX1-211ENST00000560829 NDUFA10O95299 355 aa14.13□□□□□ -0.15
SNX1-211ENST00000560829 HUNKP57058 714 aa14.13□□□□□ -0.15
SNX1-211ENST00000560829 TTLL4Q14679 1199 aa14.13□□□□□ -0.15
SNX1-211ENST00000560829 EMC2Q15006 297 aa14.13□□□□□ -0.15
SNX1-211ENST00000560829 DPY19L2P1Q6NXN4 242 aa14.13□□□□□ -0.15
SNX1-211ENST00000560829 ARMCX2Q7L311 632 aa14.13□□□□□ -0.15
SNX1-211ENST00000560829 KIF18AQ8NI77 898 aa14.13□□□□□ -0.15
SNX1-211ENST00000560829 SCFD2Q8WU76 684 aa14.13□□□□□ -0.15
SNX1-211ENST00000560829 SYN2Q92777 582 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms