RNA–Protein interactions for RNA: ENST00000560580.5

GCNT3-208, Transcript of glucosaminyl (N-acetyl) transferase 3, mucin type, human

TSL 4

Gene GCNT3, Length 562 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GCNT3-208	ENST00000560580	ST6GALNAC4	Q9H4F1	302 aa		11.16	□□□□□ -0.62
GCNT3-208	ENST00000560580	GRPEL1	Q9HAV7	217 aa		11.16	□□□□□ -0.62
GCNT3-208	ENST00000560580	CTNND2	Q9UQB3	1225 aa		11.16	□□□□□ -0.62
GCNT3-208	ENST00000560580	PCDHA2	Q9Y5H9	948 aa		11.16	□□□□□ -0.62
GCNT3-208	ENST00000560580	SCN10A	Q9Y5Y9	1956 aa		11.16	□□□□□ -0.62
GCNT3-208	ENST00000560580	NRCAM	Q92823	1304 aa		11.15	□□□□□ -0.62
GCNT3-208	ENST00000560580	IGKV6-21	A0A0C4DH24	114 aa		11.15	□□□□□ -0.62
GCNT3-208	ENST00000560580	HAS3	O00219	553 aa		11.15	□□□□□ -0.62
GCNT3-208	ENST00000560580	CABYR	O75952	493 aa		11.15	□□□□□ -0.62
GCNT3-208	ENST00000560580	GCNT3	O95395	438 aa		11.15	□□□□□ -0.62
GCNT3-208	ENST00000560580	INSRR	P14616	1297 aa		11.15	□□□□□ -0.62
GCNT3-208	ENST00000560580	CTCF	P49711	727 aa	Predicted RBP	11.15	□□□□□ -0.62
GCNT3-208	ENST00000560580	PURA	Q00577	322 aa	Known RBP	11.15	□□□□□ -0.62
GCNT3-208	ENST00000560580	LRRC63	Q05C16	580 aa		11.15	□□□□□ -0.62
GCNT3-208	ENST00000560580	PPFIA1	Q13136	1202 aa		11.15	□□□□□ -0.62
GCNT3-208	ENST00000560580	MXD4	Q14582	209 aa	Predicted RBP	11.15	□□□□□ -0.62
GCNT3-208	ENST00000560580	IQCB1	Q15051	598 aa		11.15	□□□□□ -0.62
GCNT3-208	ENST00000560580	BMT2	Q1RMZ1	405 aa		11.15	□□□□□ -0.62
GCNT3-208	ENST00000560580	KIAA0753	Q2KHM9	967 aa		11.15	□□□□□ -0.62
GCNT3-208	ENST00000560580	SLC9C1	Q4G0N8	1177 aa		11.15	□□□□□ -0.62
GCNT3-208	ENST00000560580	SPATA1	Q5VX52	437 aa		11.15	□□□□□ -0.62
GCNT3-208	ENST00000560580	KLHL10	Q6JEL2	608 aa		11.15	□□□□□ -0.62
GCNT3-208	ENST00000560580	PPP4R3CP	Q6ZMV5	832 aa		11.15	□□□□□ -0.62
GCNT3-208	ENST00000560580	MAEA	Q7L5Y9	396 aa		11.15	□□□□□ -0.62
GCNT3-208	ENST00000560580	CTU1	Q7Z7A3	348 aa	Known RBP	11.15	□□□□□ -0.62
GCNT3-208	ENST00000560580	DAW1	Q8N136	415 aa		11.15	□□□□□ -0.62
GCNT3-208	ENST00000560580	ZNF710	Q8N1W2	664 aa		11.15	□□□□□ -0.62
GCNT3-208	ENST00000560580	AOPEP	Q8N6M6	819 aa		11.15	□□□□□ -0.62
GCNT3-208	ENST00000560580	RNF214	Q8ND24	703 aa		11.15	□□□□□ -0.62
GCNT3-208	ENST00000560580	KLHDC9	Q8NEP7	349 aa		11.15	□□□□□ -0.62
GCNT3-208	ENST00000560580	ZNF507	Q8TCN5	953 aa		11.15	□□□□□ -0.62
GCNT3-208	ENST00000560580	NOC3L	Q8WTT2	800 aa	Known RBP	11.15	□□□□□ -0.62
GCNT3-208	ENST00000560580	NELFB	Q8WX92	580 aa		11.15	□□□□□ -0.62
GCNT3-208	ENST00000560580	PSPC1	Q8WXF1	523 aa	Known RBP	11.15	□□□□□ -0.62
GCNT3-208	ENST00000560580	ANP32B	Q92688	251 aa	Known RBP	11.15	□□□□□ -0.62
GCNT3-208	ENST00000560580	P2RX5	Q93086	422 aa		11.15	□□□□□ -0.62
GCNT3-208	ENST00000560580	LENG1	Q96BZ8	264 aa	Predicted RBP	11.15	□□□□□ -0.62
GCNT3-208	ENST00000560580	SH2D3A	Q9BRG2	576 aa		11.15	□□□□□ -0.62
GCNT3-208	ENST00000560580	TSEN34	Q9BSV6	310 aa	Known RBP	11.15	□□□□□ -0.62
GCNT3-208	ENST00000560580	POLR3F	Q9H1D9	316 aa	Predicted RBP	11.15	□□□□□ -0.62
GCNT3-208	ENST00000560580	RNPEP	Q9H4A4	650 aa		11.15	□□□□□ -0.62
GCNT3-208	ENST00000560580	TMEM206	Q9H813	350 aa		11.15	□□□□□ -0.62
GCNT3-208	ENST00000560580	KMT5A	Q9NQR1	393 aa		11.15	□□□□□ -0.62
GCNT3-208	ENST00000560580	TBC1D7	Q9P0N9	293 aa		11.15	□□□□□ -0.62
GCNT3-208	ENST00000560580	EXOC7	Q9UPT5	735 aa		11.15	□□□□□ -0.62
GCNT3-208	ENST00000560580	CCDC169	A6NNP5	214 aa		11.14	□□□□□ -0.63
GCNT3-208	ENST00000560580	SFI1	A8K8P3	1242 aa		11.14	□□□□□ -0.63
GCNT3-208	ENST00000560580		K7ENM7	598 aa		11.14	□□□□□ -0.63
GCNT3-208	ENST00000560580	CALU	O43852	315 aa	Predicted RBP	11.14	□□□□□ -0.63
GCNT3-208	ENST00000560580	ADAMTS4	O75173	837 aa		11.14	□□□□□ -0.63
GCNT3-208	ENST00000560580	PGK1	P00558	417 aa		11.14	□□□□□ -0.63
GCNT3-208	ENST00000560580	RPLP2	P05387	115 aa	Known RBP	11.14	□□□□□ -0.63
GCNT3-208	ENST00000560580	HSPA8	P11142	646 aa	Known RBP	11.14	□□□□□ -0.63
GCNT3-208	ENST00000560580	CD44	P16070	742 aa	Known RBP	11.14	□□□□□ -0.63
GCNT3-208	ENST00000560580	PTGS1	P23219	599 aa		11.14	□□□□□ -0.63
GCNT3-208	ENST00000560580	ARL2	P36404	184 aa		11.14	□□□□□ -0.63
GCNT3-208	ENST00000560580	NAMPT	P43490	491 aa		11.14	□□□□□ -0.63
GCNT3-208	ENST00000560580	NCKAP1L	P55160	1127 aa		11.14	□□□□□ -0.63
GCNT3-208	ENST00000560580	PEX3	P56589	373 aa		11.14	□□□□□ -0.63
GCNT3-208	ENST00000560580	SNRPF	P62306	86 aa	Known RBP	11.14	□□□□□ -0.63
GCNT3-208	ENST00000560580	CDC42EP1	Q00587	391 aa		11.14	□□□□□ -0.63
GCNT3-208	ENST00000560580	BEX3	Q00994	111 aa		11.14	□□□□□ -0.63
GCNT3-208	ENST00000560580	TFDP1	Q14186	410 aa		11.14	□□□□□ -0.63
GCNT3-208	ENST00000560580	GRIK4	Q16099	956 aa		11.14	□□□□□ -0.63
GCNT3-208	ENST00000560580	CENPP	Q6IPU0	288 aa		11.14	□□□□□ -0.63
GCNT3-208	ENST00000560580	EPM2AIP1	Q7L775	607 aa	Predicted RBP	11.14	□□□□□ -0.63
GCNT3-208	ENST00000560580	ZNF720	Q7Z2F6	126 aa		11.14	□□□□□ -0.63
GCNT3-208	ENST00000560580	LUZP1	Q86V48	1076 aa		11.14	□□□□□ -0.63
GCNT3-208	ENST00000560580	DHX40	Q8IX18	779 aa	Known RBP	11.14	□□□□□ -0.63
GCNT3-208	ENST00000560580	SMYD4	Q8IYR2	804 aa	Predicted RBP	11.14	□□□□□ -0.63
GCNT3-208	ENST00000560580	ARRDC4	Q8NCT1	418 aa		11.14	□□□□□ -0.63
GCNT3-208	ENST00000560580	GOLGA5	Q8TBA6	731 aa		11.14	□□□□□ -0.63
GCNT3-208	ENST00000560580	KCNN1	Q92952	543 aa		11.14	□□□□□ -0.63
GCNT3-208	ENST00000560580	NTPCR	Q9BSD7	190 aa	Known RBP	11.14	□□□□□ -0.63
GCNT3-208	ENST00000560580	XPNPEP1	Q9NQW7	623 aa		11.14	□□□□□ -0.63
GCNT3-208	ENST00000560580	CGN	Q9P2M7	1197 aa	Known RBP	11.14	□□□□□ -0.63
GCNT3-208	ENST00000560580	MOXD2P	A6NHM9	499 aa		11.13	□□□□□ -0.63
GCNT3-208	ENST00000560580	ZBTB42	B2RXF5	422 aa		11.13	□□□□□ -0.63
GCNT3-208	ENST00000560580	C22orf31	O95567	290 aa		11.13	□□□□□ -0.63
GCNT3-208	ENST00000560580	SMIM10L2A	P0DMW4	78 aa		11.13	□□□□□ -0.63
GCNT3-208	ENST00000560580	SMIM10L2B	P0DMW5	78 aa		11.13	□□□□□ -0.63
GCNT3-208	ENST00000560580	KLRC1	P26715	233 aa		11.13	□□□□□ -0.63
GCNT3-208	ENST00000560580	NPTX2	P47972	431 aa		11.13	□□□□□ -0.63
GCNT3-208	ENST00000560580	IGBP1	P78318	339 aa		11.13	□□□□□ -0.63
GCNT3-208	ENST00000560580	SPAG1	Q07617	926 aa		11.13	□□□□□ -0.63
GCNT3-208	ENST00000560580	HSP90AA2P	Q14568	343 aa	Predicted RBP	11.13	□□□□□ -0.63
GCNT3-208	ENST00000560580	KNOP1	Q1ED39	458 aa	Known RBP	11.13	□□□□□ -0.63
GCNT3-208	ENST00000560580	EFCAB12	Q6NXP0	572 aa		11.13	□□□□□ -0.63
GCNT3-208	ENST00000560580	FBXO46	Q6PJ61	603 aa	Predicted RBP	11.13	□□□□□ -0.63
GCNT3-208	ENST00000560580	MTHFD1L	Q6UB35	978 aa		11.13	□□□□□ -0.63
GCNT3-208	ENST00000560580	HAUS6	Q7Z4H7	955 aa		11.13	□□□□□ -0.63
GCNT3-208	ENST00000560580	FAM114A1	Q8IWE2	563 aa		11.13	□□□□□ -0.63
GCNT3-208	ENST00000560580	METTL13	Q8N6R0	699 aa		11.13	□□□□□ -0.63
GCNT3-208	ENST00000560580	C7orf31	Q8N865	590 aa		11.13	□□□□□ -0.63
GCNT3-208	ENST00000560580	ANKRD20A12P	Q8NF67	263 aa		11.13	□□□□□ -0.63
GCNT3-208	ENST00000560580	DEPTOR	Q8TB45	409 aa		11.13	□□□□□ -0.63
GCNT3-208	ENST00000560580	SCFD1	Q8WVM8	642 aa		11.13	□□□□□ -0.63
GCNT3-208	ENST00000560580	KAT2B	Q92831	832 aa		11.13	□□□□□ -0.63
GCNT3-208	ENST00000560580	HPS3	Q969F9	1004 aa		11.13	□□□□□ -0.63
GCNT3-208	ENST00000560580	ACCS	Q96QU6	501 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms