RNA–Protein interactions for RNA: ENST00000560532.1

SLTM-223, Transcript of SAFB like transcription modulator, human

TSL 4

Gene SLTM, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-223	ENST00000560532	TCF25	Q9BQ70	676 aa		5.69	□□□□□ -1.5
SLTM-223	ENST00000560532	SMURF1	Q9HCE7	757 aa		5.69	□□□□□ -1.5
SLTM-223	ENST00000560532	PODXL2	Q9NZ53	605 aa		5.69	□□□□□ -1.5
SLTM-223	ENST00000560532	VWA7	Q9Y334	891 aa		5.69	□□□□□ -1.5
SLTM-223	ENST00000560532	GOLGA6L6	A8MZA4	724 aa		5.68	□□□□□ -1.5
SLTM-223	ENST00000560532	INO80B-WBP1	J3KQ70	363 aa		5.68	□□□□□ -1.5
SLTM-223	ENST00000560532	SCD	O00767	359 aa		5.68	□□□□□ -1.5
SLTM-223	ENST00000560532	AQP7	O14520	342 aa		5.68	□□□□□ -1.5
SLTM-223	ENST00000560532	B3GALT2	O43825	422 aa		5.68	□□□□□ -1.5
SLTM-223	ENST00000560532	H2AFY	O75367	372 aa	Known RBP	5.68	□□□□□ -1.5
SLTM-223	ENST00000560532	FGR	P09769	529 aa		5.68	□□□□□ -1.5
SLTM-223	ENST00000560532	APEX1	P27695	318 aa	Known RBP	5.68	□□□□□ -1.5
SLTM-223	ENST00000560532	DNM2	P50570	870 aa		5.68	□□□□□ -1.5
SLTM-223	ENST00000560532	ADAM8	P78325	824 aa		5.68	□□□□□ -1.5
SLTM-223	ENST00000560532	MAP3K12	Q12852	859 aa		5.68	□□□□□ -1.5
SLTM-223	ENST00000560532	DDR2	Q16832	855 aa		5.68	□□□□□ -1.5
SLTM-223	ENST00000560532	TM4SF20	Q53R12	229 aa		5.68	□□□□□ -1.5
SLTM-223	ENST00000560532	C1QL3	Q5VWW1	255 aa		5.68	□□□□□ -1.5
SLTM-223	ENST00000560532	PAPD7	Q5XG87	772 aa	Known RBP	5.68	□□□□□ -1.5
SLTM-223	ENST00000560532	RD3	Q7Z3Z2	195 aa		5.68	□□□□□ -1.5
SLTM-223	ENST00000560532	THAP3	Q8WTV1	239 aa	Predicted RBP	5.68	□□□□□ -1.5
SLTM-223	ENST00000560532	INO80B	Q9C086	356 aa	Predicted RBP	5.68	□□□□□ -1.5
SLTM-223	ENST00000560532	CCDC66	A2RUB6	948 aa		5.67	□□□□□ -1.5
SLTM-223	ENST00000560532	C2orf78	A6NCI8	922 aa		5.67	□□□□□ -1.5
SLTM-223	ENST00000560532	ITGB6	P18564	788 aa		5.67	□□□□□ -1.5
SLTM-223	ENST00000560532	CLK3	P49761	638 aa	Known RBP	5.67	□□□□□ -1.5
SLTM-223	ENST00000560532	ARID5A	Q03989	594 aa		5.67	□□□□□ -1.5
SLTM-223	ENST00000560532	TCIRG1	Q13488	830 aa		5.67	□□□□□ -1.5
SLTM-223	ENST00000560532	NBPF6	Q5VWK0	638 aa		5.67	□□□□□ -1.5
SLTM-223	ENST00000560532	FSTL4	Q6MZW2	842 aa		5.67	□□□□□ -1.5
SLTM-223	ENST00000560532	ANKS3	Q6ZW76	656 aa		5.67	□□□□□ -1.5
SLTM-223	ENST00000560532	C16orf59	Q7L2K0	433 aa		5.67	□□□□□ -1.5
SLTM-223	ENST00000560532	MAMDC2	Q7Z304	686 aa	Predicted RBP	5.67	□□□□□ -1.5
SLTM-223	ENST00000560532	MCF2L2	Q86YR7	1114 aa		5.67	□□□□□ -1.5
SLTM-223	ENST00000560532	CISD2	Q8N5K1	135 aa	Known RBP	5.67	□□□□□ -1.5
SLTM-223	ENST00000560532	NBPF4	Q96M43	638 aa		5.67	□□□□□ -1.5
SLTM-223	ENST00000560532	TOR3A	Q9H497	397 aa		5.67	□□□□□ -1.5
SLTM-223	ENST00000560532	IL23A	Q9NPF7	189 aa		5.67	□□□□□ -1.5
SLTM-223	ENST00000560532	RCAN3	Q9UKA8	241 aa		5.67	□□□□□ -1.5
SLTM-223	ENST00000560532	SORCS3	Q9UPU3	1222 aa		5.67	□□□□□ -1.5
SLTM-223	ENST00000560532	HS3ST4	Q9Y661	456 aa		5.67	□□□□□ -1.5
SLTM-223	ENST00000560532	RASSF10	A6NK89	507 aa		5.66	□□□□□ -1.5
SLTM-223	ENST00000560532	FOXP2	O15409	715 aa		5.66	□□□□□ -1.5
SLTM-223	ENST00000560532	SESN2	P58004	480 aa	Predicted RBP	5.66	□□□□□ -1.5
SLTM-223	ENST00000560532	GUCY1A3	Q02108	690 aa		5.66	□□□□□ -1.5
SLTM-223	ENST00000560532	TIGD2	Q4W5G0	525 aa		5.66	□□□□□ -1.5
SLTM-223	ENST00000560532	CPT1C	Q8TCG5	803 aa		5.66	□□□□□ -1.5
SLTM-223	ENST00000560532	CALML6	Q8TD86	181 aa		5.66	□□□□□ -1.5
SLTM-223	ENST00000560532	ERCC4	Q92889	916 aa	Predicted RBP	5.66	□□□□□ -1.5
SLTM-223	ENST00000560532	R3HDML	Q9H3Y0	253 aa		5.66	□□□□□ -1.5
SLTM-223	ENST00000560532	CYP4F11	Q9HBI6	524 aa		5.66	□□□□□ -1.5
SLTM-223	ENST00000560532	DENND2A	Q9ULE3	1009 aa		5.66	□□□□□ -1.5
SLTM-223	ENST00000560532	GRXCR1	A8MXD5	290 aa		5.65	□□□□□ -1.5
SLTM-223	ENST00000560532	MFAP3L	O75121	409 aa		5.65	□□□□□ -1.5
SLTM-223	ENST00000560532	HTR3D	Q70Z44	454 aa		5.65	□□□□□ -1.5
SLTM-223	ENST00000560532	NOSTRIN	Q8IVI9	506 aa		5.65	□□□□□ -1.5
SLTM-223	ENST00000560532	GFM2	Q969S9	779 aa	Known RBP	5.65	□□□□□ -1.5
SLTM-223	ENST00000560532	SAE1	Q9UBE0	346 aa	Predicted RBP	5.65	□□□□□ -1.5
SLTM-223	ENST00000560532	ASB1	Q9Y576	335 aa		5.65	□□□□□ -1.5
SLTM-223	ENST00000560532	SPATA31A6	Q5VVP1	1343 aa		5.65	□□□□□ -1.51
SLTM-223	ENST00000560532	COL4A3	Q01955	1670 aa		5.64	□□□□□ -1.51
SLTM-223	ENST00000560532	ARVCF	O00192	962 aa		5.64	□□□□□ -1.51
SLTM-223	ENST00000560532	FAM47C	Q5HY64	1035 aa		5.64	□□□□□ -1.51
SLTM-223	ENST00000560532	ZNF362	Q5T0B9	420 aa	Predicted RBP	5.64	□□□□□ -1.51
SLTM-223	ENST00000560532	KRT40	Q6A162	431 aa		5.64	□□□□□ -1.51
SLTM-223	ENST00000560532	ARL8A	Q96BM9	186 aa		5.64	□□□□□ -1.51
SLTM-223	ENST00000560532	PRDM13	Q9H4Q3	707 aa		5.64	□□□□□ -1.51
SLTM-223	ENST00000560532	NCDN	Q9UBB6	729 aa		5.64	□□□□□ -1.51
SLTM-223	ENST00000560532	GSTA4	O15217	222 aa		5.63	□□□□□ -1.51
SLTM-223	ENST00000560532	IPO13	O94829	963 aa	Known RBP	5.63	□□□□□ -1.51
SLTM-223	ENST00000560532	ZFP36	P26651	326 aa	Known RBP	5.63	□□□□□ -1.51
SLTM-223	ENST00000560532	PLEKHG4	Q58EX7	1191 aa		5.63	□□□□□ -1.51
SLTM-223	ENST00000560532	MFSD5	Q6N075	450 aa		5.63	□□□□□ -1.51
SLTM-223	ENST00000560532	CXorf67	Q86X51	503 aa	Predicted RBP	5.63	□□□□□ -1.51
SLTM-223	ENST00000560532	LRRC47	Q8N1G4	583 aa	Known RBP	5.63	□□□□□ -1.51
SLTM-223	ENST00000560532	MDGA1	Q8NFP4	955 aa		5.63	□□□□□ -1.51
SLTM-223	ENST00000560532	PTPRN2	Q92932	1015 aa		5.63	□□□□□ -1.51
SLTM-223	ENST00000560532	ZNF512	Q96ME7	567 aa	Predicted RBP	5.63	□□□□□ -1.51
SLTM-223	ENST00000560532	TINF2	Q9BSI4	451 aa		5.63	□□□□□ -1.51
SLTM-223	ENST00000560532	RSAD1	Q9HA92	442 aa		5.63	□□□□□ -1.51
SLTM-223	ENST00000560532	KCNH7	Q9NS40	1196 aa		5.63	□□□□□ -1.51
SLTM-223	ENST00000560532	IGSF5	Q9NSI5	407 aa		5.63	□□□□□ -1.51
SLTM-223	ENST00000560532	PCDHA9	Q9Y5H5	950 aa		5.63	□□□□□ -1.51
SLTM-223	ENST00000560532	COX11	Q9Y6N1	276 aa		5.63	□□□□□ -1.51
SLTM-223	ENST00000560532	GOLGA6L22	H0YM25	854 aa		5.62	□□□□□ -1.51
SLTM-223	ENST00000560532	KLF4	O43474	513 aa		5.62	□□□□□ -1.51
SLTM-223	ENST00000560532	PPFIA4	O75335	1185 aa		5.62	□□□□□ -1.51
SLTM-223	ENST00000560532	MAF	O75444	373 aa	Predicted RBP	5.62	□□□□□ -1.51
SLTM-223	ENST00000560532	SCAF4	O95104	1147 aa	Known RBP	5.62	□□□□□ -1.51
SLTM-223	ENST00000560532	TCF3	P15923	654 aa		5.62	□□□□□ -1.51
SLTM-223	ENST00000560532	HK1	P19367	917 aa		5.62	□□□□□ -1.51
SLTM-223	ENST00000560532	TMEM132B	Q14DG7	1078 aa		5.62	□□□□□ -1.51
SLTM-223	ENST00000560532		Q6YL49	198 aa		5.62	□□□□□ -1.51
SLTM-223	ENST00000560532	ZC3H7A	Q8IWR0	971 aa	Known RBP	5.62	□□□□□ -1.51
SLTM-223	ENST00000560532	ST13P5	Q8NFI4	369 aa	Predicted RBP	5.62	□□□□□ -1.51
SLTM-223	ENST00000560532	FAM193B	Q96PV7	902 aa	Predicted RBP	5.62	□□□□□ -1.51
SLTM-223	ENST00000560532	ZNF768	Q9H5H4	540 aa	Known RBP	5.62	□□□□□ -1.51
SLTM-223	ENST00000560532	CENPVL1	A0A0U1RR11	272 aa		5.61	□□□□□ -1.51
SLTM-223	ENST00000560532	LPXN	O60711	386 aa		5.61	□□□□□ -1.51
SLTM-223	ENST00000560532	TOX4	O94842	621 aa		5.61	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms