RNA–Protein interactions for RNA: ENST00000560469.5

PBX1-218, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 1,674 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-218ENST00000560469 CAPN11Q9UMQ6 739 aa24.74■■□□□ 1.55
PBX1-218ENST00000560469 MCM3APO60318 1980 aa24.74■■□□□ 1.55
PBX1-218ENST00000560469 NOP56O00567 594 aaKnown RBP24.73■■□□□ 1.55
PBX1-218ENST00000560469 SLC10A3P09131 477 aa24.73■■□□□ 1.55
PBX1-218ENST00000560469 EPB41P11171 864 aaKnown RBP24.73■■□□□ 1.55
PBX1-218ENST00000560469 SNRPFP62306 86 aaKnown RBP24.73■■□□□ 1.55
PBX1-218ENST00000560469 DMP1Q13316 513 aaPredicted RBP24.73■■□□□ 1.55
PBX1-218ENST00000560469 MTERF2Q49AM1 385 aa24.73■■□□□ 1.55
PBX1-218ENST00000560469 DPP9Q86TI2 863 aa24.73■■□□□ 1.55
PBX1-218ENST00000560469 FAM167AQ96KS9 214 aa24.73■■□□□ 1.55
PBX1-218ENST00000560469 PCMTD1Q96MG8 357 aaPredicted RBP24.73■■□□□ 1.55
PBX1-218ENST00000560469 PPME1Q9Y570 386 aa24.73■■□□□ 1.55
PBX1-218ENST00000560469 ADGRA2Q96PE1 1338 aa24.73■■□□□ 1.55
PBX1-218ENST00000560469 SLC15A5A6NIM6 579 aa24.72■■□□□ 1.55
PBX1-218ENST00000560469 IGF2BP3O00425 579 aaKnown RBP eCLIP24.72■■□□□ 1.55
PBX1-218ENST00000560469 CLIC2O15247 247 aa24.72■■□□□ 1.55
PBX1-218ENST00000560469 LGR5O75473 907 aa24.72■■□□□ 1.55
PBX1-218ENST00000560469 MAMDC4Q6UXC1 1216 aa24.72■■□□□ 1.55
PBX1-218ENST00000560469 KSR1Q8IVT5 923 aa24.72■■□□□ 1.55
PBX1-218ENST00000560469 NTPCRQ9BSD7 190 aaKnown RBP24.72■■□□□ 1.55
PBX1-218ENST00000560469 MKNK1Q9BUB5 465 aa24.72■■□□□ 1.55
PBX1-218ENST00000560469 AGPAT3Q9NRZ7 376 aa24.72■■□□□ 1.55
PBX1-218ENST00000560469 LUC7L2Q9Y383 392 aaKnown RBP24.72■■□□□ 1.55
PBX1-218ENST00000560469 ZNF236Q9UL36 1845 aa24.72■■□□□ 1.55
PBX1-218ENST00000560469 RBM47A0AV96 593 aaKnown RBP24.72■■□□□ 1.55
PBX1-218ENST00000560469 CCP110O43303 1012 aa24.72■■□□□ 1.55
PBX1-218ENST00000560469 OFD1O75665 1012 aa24.72■■□□□ 1.55
PBX1-218ENST00000560469 TRIM21P19474 475 aaKnown RBP24.72■■□□□ 1.55
PBX1-218ENST00000560469 FECHP22830 423 aa24.72■■□□□ 1.55
PBX1-218ENST00000560469 KRT9P35527 623 aa24.72■■□□□ 1.55
PBX1-218ENST00000560469 TAF1CQ15572 869 aaPredicted RBP24.72■■□□□ 1.55
PBX1-218ENST00000560469 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.72■■□□□ 1.55
PBX1-218ENST00000560469 SLC9A9Q8IVB4 645 aa24.72■■□□□ 1.55
PBX1-218ENST00000560469 CCAR2Q8N163 923 aaKnown RBP24.72■■□□□ 1.55
PBX1-218ENST00000560469 TMEM174Q8WUU8 243 aa24.72■■□□□ 1.55
PBX1-218ENST00000560469 SPATA33Q96N06 139 aa24.72■■□□□ 1.55
PBX1-218ENST00000560469 XPNPEP1Q9NQW7 623 aa24.72■■□□□ 1.55
PBX1-218ENST00000560469 ABHD10Q9NUJ1 306 aa24.72■■□□□ 1.55
PBX1-218ENST00000560469 DMAC2Q9NW81 257 aa24.72■■□□□ 1.55
PBX1-218ENST00000560469 SLC5A4Q9NY91 659 aa24.72■■□□□ 1.55
PBX1-218ENST00000560469 SIK3Q9Y2K2 1263 aa24.72■■□□□ 1.55
PBX1-218ENST00000560469 A0A1W2PQJ5 194 aa24.71■■□□□ 1.55
PBX1-218ENST00000560469 TTC26A0AVF1 554 aa24.71■■□□□ 1.55
PBX1-218ENST00000560469 AKAP3O75969 853 aa24.71■■□□□ 1.55
PBX1-218ENST00000560469 ABCD1P33897 745 aa24.71■■□□□ 1.55
PBX1-218ENST00000560469 RFC5P40937 340 aa24.71■■□□□ 1.55
PBX1-218ENST00000560469 NPTX2P47972 431 aa24.71■■□□□ 1.55
PBX1-218ENST00000560469 POLGP54098 1239 aaPredicted RBP24.71■■□□□ 1.55
PBX1-218ENST00000560469 PLPPR4Q7Z2D5 763 aa24.71■■□□□ 1.55
PBX1-218ENST00000560469 IFT74Q96LB3 600 aa24.71■■□□□ 1.55
PBX1-218ENST00000560469 TTYH3Q9C0H2 523 aa24.71■■□□□ 1.55
PBX1-218ENST00000560469 DHX33Q9H6R0 707 aaKnown RBP24.71■■□□□ 1.55
PBX1-218ENST00000560469 KMT5AQ9NQR1 393 aa24.71■■□□□ 1.55
PBX1-218ENST00000560469 CPA4Q9UI42 421 aa24.71■■□□□ 1.55
PBX1-218ENST00000560469 EXOC7Q9UPT5 735 aa24.71■■□□□ 1.55
PBX1-218ENST00000560469 TLL2Q9Y6L7 1015 aa24.71■■□□□ 1.55
PBX1-218ENST00000560469 CCDC169A6NNP5 214 aa24.7■■□□□ 1.54
PBX1-218ENST00000560469 SLC16A4O15374 487 aa24.7■■□□□ 1.54
PBX1-218ENST00000560469 PSMC2P35998 433 aaKnown RBP24.7■■□□□ 1.54
PBX1-218ENST00000560469 EMC2Q15006 297 aa24.7■■□□□ 1.54
PBX1-218ENST00000560469 HSDL1Q3SXM5 330 aa24.7■■□□□ 1.54
PBX1-218ENST00000560469 TAPT1Q6NXT6 567 aa24.7■■□□□ 1.54
PBX1-218ENST00000560469 C12orf56Q8IXR9 622 aa24.7■■□□□ 1.54
PBX1-218ENST00000560469 PDGFCQ9NRA1 345 aa24.7■■□□□ 1.54
PBX1-218ENST00000560469 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.7■■□□□ 1.54
PBX1-218ENST00000560469 EMSYQ7Z589 1322 aa24.7■■□□□ 1.54
PBX1-218ENST00000560469 H0YCG3 227 aa24.69■■□□□ 1.54
PBX1-218ENST00000560469 E4F1Q66K89 784 aaPredicted RBP24.69■■□□□ 1.54
PBX1-218ENST00000560469 TMEM161BQ8NDZ6 487 aa24.69■■□□□ 1.54
PBX1-218ENST00000560469 OR8K1Q8NGG5 319 aa24.69■■□□□ 1.54
PBX1-218ENST00000560469 SLC7A3Q8WY07 619 aa24.69■■□□□ 1.54
PBX1-218ENST00000560469 CCDC102AQ96A19 550 aa24.69■■□□□ 1.54
PBX1-218ENST00000560469 MAML3Q96JK9 1138 aa24.69■■□□□ 1.54
PBX1-218ENST00000560469 FRMD4BQ9Y2L6 1034 aa24.69■■□□□ 1.54
PBX1-218ENST00000560469 RASSF10A6NK89 507 aa24.69■■□□□ 1.54
PBX1-218ENST00000560469 XRCC5P13010 732 aaKnown RBP24.69■■□□□ 1.54
PBX1-218ENST00000560469 SCP2P22307 547 aa24.69■■□□□ 1.54
PBX1-218ENST00000560469 SLC26A2P50443 739 aa24.69■■□□□ 1.54
PBX1-218ENST00000560469 LAMC2Q13753 1193 aa24.69■■□□□ 1.54
PBX1-218ENST00000560469 TARBP2Q15633 366 aaKnown RBP24.69■■□□□ 1.54
PBX1-218ENST00000560469 TSR1Q2NL82 804 aaKnown RBP24.69■■□□□ 1.54
PBX1-218ENST00000560469 IFNL1Q8IU54 200 aa24.69■■□□□ 1.54
PBX1-218ENST00000560469 FAM186BQ8IYM0 893 aa24.69■■□□□ 1.54
PBX1-218ENST00000560469 MSL3Q8N5Y2 521 aaKnown RBP24.69■■□□□ 1.54
PBX1-218ENST00000560469 ZNF397Q8NF99 534 aaPredicted RBP24.69■■□□□ 1.54
PBX1-218ENST00000560469 BBXQ8WY36 941 aaPredicted RBP24.69■■□□□ 1.54
PBX1-218ENST00000560469 GLG1Q92896 1179 aa24.69■■□□□ 1.54
PBX1-218ENST00000560469 CEP89Q96ST8 783 aa24.69■■□□□ 1.54
PBX1-218ENST00000560469 POLR3FQ9H1D9 316 aaPredicted RBP24.69■■□□□ 1.54
PBX1-218ENST00000560469 RNF225M0QZC1 329 aaPredicted RBP24.68■■□□□ 1.54
PBX1-218ENST00000560469 CASP4P49662 377 aa24.68■■□□□ 1.54
PBX1-218ENST00000560469 KLK7P49862 253 aa24.68■■□□□ 1.54
PBX1-218ENST00000560469 ZBED6P86452 979 aa24.68■■□□□ 1.54
PBX1-218ENST00000560469 KCNH2Q12809 1159 aa24.68■■□□□ 1.54
PBX1-218ENST00000560469 DNTTIP2Q5QJE6 756 aaKnown RBP24.68■■□□□ 1.54
PBX1-218ENST00000560469 TMTC1Q8IUR5 882 aa24.68■■□□□ 1.54
PBX1-218ENST00000560469 DNAJC7Q99615 494 aa24.68■■□□□ 1.54
PBX1-218ENST00000560469 IKZF4Q9H2S9 585 aa24.68■■□□□ 1.54
PBX1-218ENST00000560469 TBX20Q9UMR3 447 aa24.68■■□□□ 1.54
PBX1-218ENST00000560469 GH1P01241 217 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms