RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 FARP1Q9Y4F1 1045 aaPredicted RBP14.43□□□□□ -0.1
TRAF3-208ENST00000560371 MOCS3O95396 460 aa14.43□□□□□ -0.1
TRAF3-208ENST00000560371 SMIM5Q71RC9 77 aa14.43□□□□□ -0.1
TRAF3-208ENST00000560371 LRRC43Q8N309 656 aa14.43□□□□□ -0.1
TRAF3-208ENST00000560371 LBHD1Q9BQE6 289 aaPredicted RBP14.43□□□□□ -0.1
TRAF3-208ENST00000560371 MTA3Q9BTC8 594 aa14.43□□□□□ -0.1
TRAF3-208ENST00000560371 ABCA6Q8N139 1617 aa14.43□□□□□ -0.1
TRAF3-208ENST00000560371 AKR1B1P15121 316 aa14.43□□□□□ -0.1
TRAF3-208ENST00000560371 VEPH1Q14D04 833 aa14.43□□□□□ -0.1
TRAF3-208ENST00000560371 HAUS8Q9BT25 410 aa14.43□□□□□ -0.1
TRAF3-208ENST00000560371 STRIP2Q9ULQ0 834 aa14.43□□□□□ -0.1
TRAF3-208ENST00000560371 SART1O43290 800 aaKnown RBP14.43□□□□□ -0.1
TRAF3-208ENST00000560371 STX1BP61266 288 aa14.43□□□□□ -0.1
TRAF3-208ENST00000560371 KNOP1Q1ED39 458 aaKnown RBP14.43□□□□□ -0.1
TRAF3-208ENST00000560371 DUOXA2Q1HG44 320 aa14.43□□□□□ -0.1
TRAF3-208ENST00000560371 ANGEL2Q5VTE6 544 aaKnown RBP14.43□□□□□ -0.1
TRAF3-208ENST00000560371 FSD1LQ9BXM9 530 aa14.43□□□□□ -0.1
TRAF3-208ENST00000560371 DHX38Q92620 1227 aaKnown RBP14.42□□□□□ -0.1
TRAF3-208ENST00000560371 POLR3FQ9H1D9 316 aaPredicted RBP14.42□□□□□ -0.1
TRAF3-208ENST00000560371 MTIF3Q9H2K0 278 aaKnown RBP14.42□□□□□ -0.1
TRAF3-208ENST00000560371 MAP3K20Q9NYL2 800 aaKnown RBP14.42□□□□□ -0.1
TRAF3-208ENST00000560371 SPATA31A1Q5TZJ5 1347 aa14.42□□□□□ -0.1
TRAF3-208ENST00000560371 C19orf81C9J6K1 198 aa14.42□□□□□ -0.1
TRAF3-208ENST00000560371 ZRANB2O95218 330 aaKnown RBP eCLIP14.42□□□□□ -0.1
TRAF3-208ENST00000560371 VAMP7P51809 220 aa14.42□□□□□ -0.1
TRAF3-208ENST00000560371 GNGT1P63211 74 aa14.42□□□□□ -0.1
TRAF3-208ENST00000560371 KRT31Q15323 416 aa14.42□□□□□ -0.1
TRAF3-208ENST00000560371 RSBN1LQ6PCB5 846 aaPredicted RBP14.42□□□□□ -0.1
TRAF3-208ENST00000560371 EIF2AK1Q9BQI3 630 aaKnown RBP14.42□□□□□ -0.1
TRAF3-208ENST00000560371 MED4Q9NPJ6 270 aa14.42□□□□□ -0.1
TRAF3-208ENST00000560371 KLHL8Q9P2G9 620 aaPredicted RBP14.42□□□□□ -0.1
TRAF3-208ENST00000560371 C1orf167Q5SNV9 1468 aa14.42□□□□□ -0.1
TRAF3-208ENST00000560371 TTC30BQ8N4P2 665 aa14.42□□□□□ -0.1
TRAF3-208ENST00000560371 SLC9A2Q9UBY0 812 aa14.42□□□□□ -0.1
TRAF3-208ENST00000560371 DNAJC12Q9UKB3 198 aa14.42□□□□□ -0.1
TRAF3-208ENST00000560371 KBTBD13C9JR72 458 aa14.42□□□□□ -0.1
TRAF3-208ENST00000560371 CEP55Q53EZ4 464 aa14.42□□□□□ -0.1
TRAF3-208ENST00000560371 RABGGTAQ92696 567 aa14.42□□□□□ -0.1
TRAF3-208ENST00000560371 RASSF4Q9H2L5 321 aa14.42□□□□□ -0.1
TRAF3-208ENST00000560371 ABCA9Q8IUA7 1624 aa14.42□□□□□ -0.1
TRAF3-208ENST00000560371 SOWAHDA6NJG2 315 aa14.42□□□□□ -0.1
TRAF3-208ENST00000560371 CYP27A1Q02318 531 aa14.42□□□□□ -0.1
TRAF3-208ENST00000560371 PYROXD1Q8WU10 500 aa14.42□□□□□ -0.1
TRAF3-208ENST00000560371 DEPDC1BQ8WUY9 529 aa14.42□□□□□ -0.1
TRAF3-208ENST00000560371 NSUN4Q96CB9 384 aaKnown RBP14.42□□□□□ -0.1
TRAF3-208ENST00000560371 FMO2Q99518 471 aa14.42□□□□□ -0.1
TRAF3-208ENST00000560371 DNAJC5Q9H3Z4 198 aa14.42□□□□□ -0.1
TRAF3-208ENST00000560371 BAIAP2L1Q9UHR4 511 aa14.42□□□□□ -0.1
TRAF3-208ENST00000560371 USH1CQ9Y6N9 552 aa14.42□□□□□ -0.1
TRAF3-208ENST00000560371 C6orf222P0C671 652 aaPredicted RBP14.42□□□□□ -0.1
TRAF3-208ENST00000560371 KCNJ6P48051 423 aa14.42□□□□□ -0.1
TRAF3-208ENST00000560371 PPP2R3CQ969Q6 453 aa14.42□□□□□ -0.1
TRAF3-208ENST00000560371 OSBPL5Q9H0X9 879 aaPredicted RBP14.42□□□□□ -0.1
TRAF3-208ENST00000560371 HEY1Q9Y5J3 304 aa14.42□□□□□ -0.1
TRAF3-208ENST00000560371 UBE4BO95155 1302 aa14.42□□□□□ -0.1
TRAF3-208ENST00000560371 ORC4O43929 436 aa14.41□□□□□ -0.1
TRAF3-208ENST00000560371 IFNAR2P48551 515 aa14.41□□□□□ -0.1
TRAF3-208ENST00000560371 TOB2Q14106 344 aaPredicted RBP14.41□□□□□ -0.1
TRAF3-208ENST00000560371 CCDC38Q502W7 563 aa14.41□□□□□ -0.1
TRAF3-208ENST00000560371 VPS39Q96JC1 886 aa14.41□□□□□ -0.1
TRAF3-208ENST00000560371 POLD4Q9HCU8 107 aa14.41□□□□□ -0.1
TRAF3-208ENST00000560371 RBAKQ9NYW8 714 aaPredicted RBP14.41□□□□□ -0.1
TRAF3-208ENST00000560371 NVLO15381 856 aaKnown RBP14.41□□□□□ -0.1
TRAF3-208ENST00000560371 RWDD2BP57060 319 aa14.41□□□□□ -0.1
TRAF3-208ENST00000560371 APBA1Q02410 837 aa14.41□□□□□ -0.1
TRAF3-208ENST00000560371 KCNH2Q12809 1159 aa14.41□□□□□ -0.1
TRAF3-208ENST00000560371 C12orf60Q5U649 245 aa14.41□□□□□ -0.1
TRAF3-208ENST00000560371 KIF12Q96FN5 646 aa14.41□□□□□ -0.1
TRAF3-208ENST00000560371 CAPS2Q9BXY5 557 aa14.41□□□□□ -0.1
TRAF3-208ENST00000560371 EPS15L1Q9UBC2 864 aa14.41□□□□□ -0.1
TRAF3-208ENST00000560371 LRRC7Q96NW7 1537 aa14.41□□□□□ -0.1
TRAF3-208ENST00000560371 BAG2O95816 211 aa14.41□□□□□ -0.1
TRAF3-208ENST00000560371 CALB1P05937 261 aa14.41□□□□□ -0.1
TRAF3-208ENST00000560371 RAD54LQ92698 747 aa14.41□□□□□ -0.1
TRAF3-208ENST00000560371 TBK1Q9UHD2 729 aa14.41□□□□□ -0.1
TRAF3-208ENST00000560371 STAT5BP51692 787 aa14.41□□□□□ -0.1
TRAF3-208ENST00000560371 KCTD16Q68DU8 428 aa14.41□□□□□ -0.1
TRAF3-208ENST00000560371 ASNSD1Q9NWL6 643 aa14.41□□□□□ -0.1
TRAF3-208ENST00000560371 SPOPLQ6IQ16 392 aa14.41□□□□□ -0.1
TRAF3-208ENST00000560371 TTC39CQ8N584 583 aa14.41□□□□□ -0.1
TRAF3-208ENST00000560371 MB21D1Q8N884 522 aa14.41□□□□□ -0.1
TRAF3-208ENST00000560371 LRGUKQ96M69 825 aa14.41□□□□□ -0.1
TRAF3-208ENST00000560371 GGA3Q9NZ52 723 aa14.41□□□□□ -0.1
TRAF3-208ENST00000560371 E9PMD0 336 aa14.41□□□□□ -0.1
TRAF3-208ENST00000560371 CPB1P15086 417 aa14.41□□□□□ -0.1
TRAF3-208ENST00000560371 ACRBPQ8NEB7 543 aa14.41□□□□□ -0.1
TRAF3-208ENST00000560371 CFAP36Q96G28 342 aa14.41□□□□□ -0.1
TRAF3-208ENST00000560371 ZFYVE28Q9HCC9 887 aa14.41□□□□□ -0.1
TRAF3-208ENST00000560371 SUN1O94901 812 aa14.4□□□□□ -0.1
TRAF3-208ENST00000560371 COASYQ13057 564 aa14.4□□□□□ -0.1
TRAF3-208ENST00000560371 SF3B3Q15393 1217 aaKnown RBP14.4□□□□□ -0.1
TRAF3-208ENST00000560371 GPBP1L1Q9HC44 474 aaPredicted RBP14.4□□□□□ -0.1
TRAF3-208ENST00000560371 CNOT8Q9UFF9 292 aaKnown RBP14.4□□□□□ -0.1
TRAF3-208ENST00000560371 STAP1Q9ULZ2 295 aa14.4□□□□□ -0.1
TRAF3-208ENST00000560371 RFX7Q2KHR2 1363 aa14.4□□□□□ -0.1
TRAF3-208ENST00000560371 SETBP1Q9Y6X0 1596 aa14.4□□□□□ -0.1
TRAF3-208ENST00000560371 BCORL1Q5H9F3 1711 aa14.4□□□□□ -0.1
TRAF3-208ENST00000560371 TTC4O95801 387 aa14.4□□□□□ -0.1
TRAF3-208ENST00000560371 MT-ND3P03897 115 aa14.4□□□□□ -0.1
TRAF3-208ENST00000560371 GNL1P36915 607 aaPredicted RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms