RNA–Protein interactions for RNA: ENST00000560328.1

NEO1-208, Transcript of neogenin 1, human

TSL 1 (best)

Gene NEO1, Length 5,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEO1-208	ENST00000560328	ZNF699	Q32M78	642 aa		10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	TTC19	Q6DKK2	380 aa	Predicted RBP	10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	CYP4F22	Q6NT55	531 aa		10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	CACNA2D3	Q8IZS8	1091 aa		10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	JPH1	Q9HDC5	661 aa	Predicted RBP	10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	KLHL14	Q9P2G3	628 aa		10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	CNOT8	Q9UFF9	292 aa	Known RBP	10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	ARHGEF28	Q8N1W1	1705 aa	Known RBP	10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	DRAP1	Q14919	205 aa	Predicted RBP	10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	PRAMEF18	Q5VWM3	479 aa		10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	KSR1	Q8IVT5	923 aa		10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	BCAS4	Q8TDM0	211 aa		10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	PPP4R1	Q8TF05	950 aa		10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	ZMYND12	Q9H0C1	365 aa		10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	ARHGEF37	A1IGU5	675 aa		10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	SRGAP2	O75044	1071 aa		10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	INHBA	P08476	426 aa		10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	ACTN1	P12814	892 aa		10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	EZH2	Q15910	746 aa	Known RBP	10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	PASD1	Q8IV76	773 aa		10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	PDLIM2	Q96JY6	352 aa		10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	TEX13B	Q9BXU2	312 aa		10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	C2orf40	Q9H1Z8	148 aa		10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	MYOZ2	Q9NPC6	264 aa		10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	TOPORS	Q9NS56	1045 aa	Predicted RBP	10.05	□□□□□ -0.8
NEO1-208	ENST00000560328	MAD2L2	Q9UI95	211 aa		10.05	□□□□□ -0.8
NEO1-208	ENST00000560328		A0A1W2PQC6	194 aa		10.04	□□□□□ -0.8
NEO1-208	ENST00000560328	C19orf81	C9J6K1	198 aa		10.04	□□□□□ -0.8
NEO1-208	ENST00000560328	TRIM49	P0CI25	452 aa		10.04	□□□□□ -0.8
NEO1-208	ENST00000560328	TRIM49C	P0CI26	452 aa		10.04	□□□□□ -0.8
NEO1-208	ENST00000560328	ZNF18	P17022	549 aa		10.04	□□□□□ -0.8
NEO1-208	ENST00000560328	GPC5	P78333	572 aa		10.04	□□□□□ -0.8
NEO1-208	ENST00000560328	BASP1	P80723	227 aa	Known RBP	10.04	□□□□□ -0.8
NEO1-208	ENST00000560328	TROAP	Q12815	778 aa		10.04	□□□□□ -0.8
NEO1-208	ENST00000560328	KIAA1841	Q6NSI8	718 aa		10.04	□□□□□ -0.8
NEO1-208	ENST00000560328	COL23A1	Q86Y22	540 aa	Predicted RBP	10.04	□□□□□ -0.8
NEO1-208	ENST00000560328	DPF2	Q92785	391 aa		10.04	□□□□□ -0.8
NEO1-208	ENST00000560328	ZWILCH	Q9H900	591 aa		10.04	□□□□□ -0.8
NEO1-208	ENST00000560328	ANAPC7	Q9UJX3	599 aa		10.04	□□□□□ -0.8
NEO1-208	ENST00000560328	AFG3L2	Q9Y4W6	797 aa		10.04	□□□□□ -0.8
NEO1-208	ENST00000560328	IQCA1L	A6NCM1	817 aa		10.04	□□□□□ -0.8
NEO1-208	ENST00000560328	PSMA2	P25787	234 aa		10.04	□□□□□ -0.8
NEO1-208	ENST00000560328	COPB2	P35606	906 aa		10.04	□□□□□ -0.8
NEO1-208	ENST00000560328	FMR1	Q06787	632 aa	Known RBP eCLIP	10.04	□□□□□ -0.8
NEO1-208	ENST00000560328	KRT39	Q6A163	491 aa		10.04	□□□□□ -0.8
NEO1-208	ENST00000560328	RBM46	Q8TBY0	533 aa	Known RBP	10.04	□□□□□ -0.8
NEO1-208	ENST00000560328	C7orf25	Q9BPX7	421 aa		10.04	□□□□□ -0.8
NEO1-208	ENST00000560328	PDXK	O00764	312 aa		10.04	□□□□□ -0.8
NEO1-208	ENST00000560328	SMARCA1	P28370	1054 aa		10.04	□□□□□ -0.8
NEO1-208	ENST00000560328	GMPS	P49915	693 aa	Predicted RBP	10.04	□□□□□ -0.8
NEO1-208	ENST00000560328	CDO1	Q16878	200 aa		10.04	□□□□□ -0.8
NEO1-208	ENST00000560328	TMEM35B	Q8NCS4	154 aa		10.04	□□□□□ -0.8
NEO1-208	ENST00000560328	KCNB2	Q92953	911 aa		10.04	□□□□□ -0.8
NEO1-208	ENST00000560328	MRPL4	Q9BYD3	311 aa	Known RBP	10.04	□□□□□ -0.8
NEO1-208	ENST00000560328	ADGRG1	Q9Y653	693 aa		10.04	□□□□□ -0.8
NEO1-208	ENST00000560328	TBX3	O15119	743 aa		10.04	□□□□□ -0.8
NEO1-208	ENST00000560328	FRMD5	Q7Z6J6	570 aa		10.04	□□□□□ -0.8
NEO1-208	ENST00000560328	ADSSL1	Q8N142	457 aa		10.04	□□□□□ -0.8
NEO1-208	ENST00000560328	ARHGAP24	Q8N264	748 aa		10.04	□□□□□ -0.8
NEO1-208	ENST00000560328	SCYL1	Q96KG9	808 aa		10.04	□□□□□ -0.8
NEO1-208	ENST00000560328	CLCN6	P51797	869 aa		10.04	□□□□□ -0.8
NEO1-208	ENST00000560328	MRPS25	P82663	173 aa	Known RBP	10.04	□□□□□ -0.8
NEO1-208	ENST00000560328	SH2D3A	Q9BRG2	576 aa		10.04	□□□□□ -0.8
NEO1-208	ENST00000560328	TMEM60	Q9H2L4	133 aa		10.04	□□□□□ -0.8
NEO1-208	ENST00000560328	ATP8B3	O60423	1300 aa		10.03	□□□□□ -0.8
NEO1-208	ENST00000560328	ASB14	A6NK59	587 aa		10.03	□□□□□ -0.8
NEO1-208	ENST00000560328	USP27X	A6NNY8	438 aa		10.03	□□□□□ -0.8
NEO1-208	ENST00000560328	GARS	P41250	739 aa	Known RBP	10.03	□□□□□ -0.8
NEO1-208	ENST00000560328	GTF2A1	P52655	376 aa	Predicted RBP	10.03	□□□□□ -0.8
NEO1-208	ENST00000560328	PDE1B	Q01064	536 aa		10.03	□□□□□ -0.8
NEO1-208	ENST00000560328	IQCB1	Q15051	598 aa		10.03	□□□□□ -0.8
NEO1-208	ENST00000560328	TWF2	Q6IBS0	349 aa	Known RBP	10.03	□□□□□ -0.8
NEO1-208	ENST00000560328	TXNRD3	Q86VQ6	643 aa		10.03	□□□□□ -0.8
NEO1-208	ENST00000560328	GPD1L	Q8N335	351 aa		10.03	□□□□□ -0.8
NEO1-208	ENST00000560328	CCHCR1	Q8TD31	782 aa		10.03	□□□□□ -0.8
NEO1-208	ENST00000560328	GGA3	Q9NZ52	723 aa		10.03	□□□□□ -0.8
NEO1-208	ENST00000560328	SLC12A6	Q9UHW9	1150 aa		10.03	□□□□□ -0.8
NEO1-208	ENST00000560328	STAT5B	P51692	787 aa		10.03	□□□□□ -0.8
NEO1-208	ENST00000560328	ARHGEF18	Q6ZSZ5	1173 aa		10.03	□□□□□ -0.8
NEO1-208	ENST00000560328	HSPH1	Q92598	858 aa		10.03	□□□□□ -0.8
NEO1-208	ENST00000560328	INTS9	Q9NV88	658 aa	Known RBP	10.03	□□□□□ -0.8
NEO1-208	ENST00000560328	LIMA1	Q9UHB6	759 aa	Known RBP	10.03	□□□□□ -0.8
NEO1-208	ENST00000560328	EMSY	Q7Z589	1322 aa		10.03	□□□□□ -0.8
NEO1-208	ENST00000560328	CCDC160	A6NGH7	325 aa		10.03	□□□□□ -0.8
NEO1-208	ENST00000560328	RHOBTB3	O94955	611 aa		10.03	□□□□□ -0.8
NEO1-208	ENST00000560328	TPD52	P55327	224 aa	Predicted RBP	10.03	□□□□□ -0.8
NEO1-208	ENST00000560328	ABCB6	Q9NP58	842 aa		10.03	□□□□□ -0.8
NEO1-208	ENST00000560328	NGRN	Q9NPE2	291 aa	Known RBP	10.03	□□□□□ -0.8
NEO1-208	ENST00000560328	MYMK	A6NI61	221 aa		10.03	□□□□□ -0.8
NEO1-208	ENST00000560328	CP	P00450	1065 aa		10.03	□□□□□ -0.8
NEO1-208	ENST00000560328	TXN	P10599	105 aa	Known RBP	10.03	□□□□□ -0.8
NEO1-208	ENST00000560328	IFNAR2	P48551	515 aa		10.03	□□□□□ -0.8
NEO1-208	ENST00000560328	HDLBP	Q00341	1268 aa	Known RBP	10.03	□□□□□ -0.8
NEO1-208	ENST00000560328	ADCY1	Q08828	1119 aa		10.03	□□□□□ -0.8
NEO1-208	ENST00000560328	SAMD7	Q7Z3H4	446 aa		10.03	□□□□□ -0.8
NEO1-208	ENST00000560328	REEP2	Q9BRK0	252 aa		10.03	□□□□□ -0.8
NEO1-208	ENST00000560328	DEFB129	Q9H1M3	183 aa		10.03	□□□□□ -0.8
NEO1-208	ENST00000560328	AGO2	Q9UKV8	859 aa	Known RBP	10.03	□□□□□ -0.8
NEO1-208	ENST00000560328	CAPN11	Q9UMQ6	739 aa		10.03	□□□□□ -0.8
NEO1-208	ENST00000560328	DIS3	Q9Y2L1	958 aa	Known RBP	10.03	□□□□□ -0.8

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