RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 LRRC63Q05C16 580 aa15.77■□□□□ 0.11
RABGGTA-209ENST00000559551 MKRN4PQ13434 485 aaPredicted RBP15.77■□□□□ 0.11
RABGGTA-209ENST00000559551 TCP11X2Q5H9J9 407 aa15.77■□□□□ 0.11
RABGGTA-209ENST00000559551 FOXR2Q6PJQ5 311 aa15.77■□□□□ 0.11
RABGGTA-209ENST00000559551 ZC3H3Q8IXZ2 948 aaKnown RBP15.77■□□□□ 0.11
RABGGTA-209ENST00000559551 SPC24Q8NBT2 197 aa15.77■□□□□ 0.11
RABGGTA-209ENST00000559551 TMEM143Q96AN5 459 aa15.77■□□□□ 0.11
RABGGTA-209ENST00000559551 KIFC3Q9BVG8 833 aa15.77■□□□□ 0.11
RABGGTA-209ENST00000559551 SMARCAD1Q9H4L7 1026 aa15.77■□□□□ 0.11
RABGGTA-209ENST00000559551 THAP9Q9H5L6 903 aa15.77■□□□□ 0.11
RABGGTA-209ENST00000559551 ATP6V0A4Q9HBG4 840 aa15.77■□□□□ 0.11
RABGGTA-209ENST00000559551 NRBP1Q9UHY1 535 aa15.77■□□□□ 0.11
RABGGTA-209ENST00000559551 BRCA2P51587 3418 aa15.76■□□□□ 0.11
RABGGTA-209ENST00000559551 A0A1B0GTH6 734 aa15.76■□□□□ 0.11
RABGGTA-209ENST00000559551 LRRC10BA6NIK2 292 aa15.76■□□□□ 0.11
RABGGTA-209ENST00000559551 KCNJ18B7U540 433 aa15.76■□□□□ 0.11
RABGGTA-209ENST00000559551 EIF3DO15371 548 aaKnown RBP eCLIP15.76■□□□□ 0.11
RABGGTA-209ENST00000559551 DYNC1LI2O43237 492 aaPredicted RBP15.76■□□□□ 0.11
RABGGTA-209ENST00000559551 CYBAP13498 195 aa15.76■□□□□ 0.11
RABGGTA-209ENST00000559551 CDC25BP30305 580 aa15.76■□□□□ 0.11
RABGGTA-209ENST00000559551 NPTX2P47972 431 aa15.76■□□□□ 0.11
RABGGTA-209ENST00000559551 NCKAP1LP55160 1127 aa15.76■□□□□ 0.11
RABGGTA-209ENST00000559551 UBASH3AP57075 661 aa15.76■□□□□ 0.11
RABGGTA-209ENST00000559551 KCNJ12Q14500 433 aa15.76■□□□□ 0.11
RABGGTA-209ENST00000559551 TPD52L1Q16890 204 aaPredicted RBP15.76■□□□□ 0.11
RABGGTA-209ENST00000559551 KNOP1Q1ED39 458 aaKnown RBP15.76■□□□□ 0.11
RABGGTA-209ENST00000559551 ASAP3Q8TDY4 903 aa15.76■□□□□ 0.11
RABGGTA-209ENST00000559551 DRC1Q96MC2 740 aa15.76■□□□□ 0.11
RABGGTA-209ENST00000559551 NRBP2Q9NSY0 501 aa15.76■□□□□ 0.11
RABGGTA-209ENST00000559551 TRAF3IP3Q9Y228 551 aa15.76■□□□□ 0.11
RABGGTA-209ENST00000559551 GPR25O00155 361 aa15.75■□□□□ 0.11
RABGGTA-209ENST00000559551 SLC16A4O15374 487 aa15.75■□□□□ 0.11
RABGGTA-209ENST00000559551 TEX33O43247 280 aa15.75■□□□□ 0.11
RABGGTA-209ENST00000559551 PPFIA4O75335 1185 aa15.75■□□□□ 0.11
RABGGTA-209ENST00000559551 MAFO75444 373 aaPredicted RBP15.75■□□□□ 0.11
RABGGTA-209ENST00000559551 SERPINC1P01008 464 aa15.75■□□□□ 0.11
RABGGTA-209ENST00000559551 CDK11BP21127 795 aaKnown RBP15.75■□□□□ 0.11
RABGGTA-209ENST00000559551 MCPH1Q8NEM0 835 aa15.75■□□□□ 0.11
RABGGTA-209ENST00000559551 FAM167AQ96KS9 214 aa15.75■□□□□ 0.11
RABGGTA-209ENST00000559551 POLR3FQ9H1D9 316 aaPredicted RBP15.75■□□□□ 0.11
RABGGTA-209ENST00000559551 LARSQ9P2J5 1176 aaKnown RBP15.75■□□□□ 0.11
RABGGTA-209ENST00000559551 DNAH12Q6ZR08 3092 aa15.75■□□□□ 0.11
RABGGTA-209ENST00000559551 IGKV6-21A0A0C4DH24 114 aa15.75■□□□□ 0.11
RABGGTA-209ENST00000559551 A6NJR5 290 aa15.75■□□□□ 0.11
RABGGTA-209ENST00000559551 TISP43B9A030 160 aa15.75■□□□□ 0.11
RABGGTA-209ENST00000559551 K7ENM7 598 aa15.75■□□□□ 0.11
RABGGTA-209ENST00000559551 MAPTP10636 758 aaKnown RBP15.75■□□□□ 0.11
RABGGTA-209ENST00000559551 ARL2P36404 184 aa15.75■□□□□ 0.11
RABGGTA-209ENST00000559551 POLGP54098 1239 aaPredicted RBP15.75■□□□□ 0.11
RABGGTA-209ENST00000559551 NR1I3Q14994 352 aa15.75■□□□□ 0.11
RABGGTA-209ENST00000559551 TLK2Q86UE8 772 aa15.75■□□□□ 0.11
RABGGTA-209ENST00000559551 TMEM161BQ8NDZ6 487 aa15.75■□□□□ 0.11
RABGGTA-209ENST00000559551 ST6GALNAC4Q9H4F1 302 aa15.75■□□□□ 0.11
RABGGTA-209ENST00000559551 TAB2Q9NYJ8 693 aa15.75■□□□□ 0.11
RABGGTA-209ENST00000559551 ELNP15502 786 aa15.74■□□□□ 0.11
RABGGTA-209ENST00000559551 GLRA2P23416 452 aa15.74■□□□□ 0.11
RABGGTA-209ENST00000559551 SLC26A2P50443 739 aa15.74■□□□□ 0.11
RABGGTA-209ENST00000559551 GTF2BQ00403 316 aa15.74■□□□□ 0.11
RABGGTA-209ENST00000559551 TAS1R3Q7RTX0 852 aa15.74■□□□□ 0.11
RABGGTA-209ENST00000559551 HAUS6Q7Z4H7 955 aa15.74■□□□□ 0.11
RABGGTA-209ENST00000559551 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.74■□□□□ 0.11
RABGGTA-209ENST00000559551 KIFAP3Q92845 792 aa15.74■□□□□ 0.11
RABGGTA-209ENST00000559551 CNOT6LQ96LI5 555 aaKnown RBP15.74■□□□□ 0.11
RABGGTA-209ENST00000559551 NTPCRQ9BSD7 190 aaKnown RBP15.74■□□□□ 0.11
RABGGTA-209ENST00000559551 ERAP1Q9NZ08 941 aa15.74■□□□□ 0.11
RABGGTA-209ENST00000559551 MYADML2A6NDP7 307 aa15.74■□□□□ 0.11
RABGGTA-209ENST00000559551 PDXKO00764 312 aa15.74■□□□□ 0.11
RABGGTA-209ENST00000559551 RFC5P40937 340 aa15.74■□□□□ 0.11
RABGGTA-209ENST00000559551 COPB1P53618 953 aaKnown RBP15.74■□□□□ 0.11
RABGGTA-209ENST00000559551 RTP1P59025 263 aa15.74■□□□□ 0.11
RABGGTA-209ENST00000559551 PPP1R13LQ8WUF5 828 aa15.74■□□□□ 0.11
RABGGTA-209ENST00000559551 KAT2BQ92831 832 aa15.74■□□□□ 0.11
RABGGTA-209ENST00000559551 TYW1Q9NV66 732 aaKnown RBP15.74■□□□□ 0.11
RABGGTA-209ENST00000559551 SRRDQ9UH36 339 aa15.74■□□□□ 0.11
RABGGTA-209ENST00000559551 UBE4BO95155 1302 aa15.73■□□□□ 0.11
RABGGTA-209ENST00000559551 SCN10AQ9Y5Y9 1956 aa15.73■□□□□ 0.11
RABGGTA-209ENST00000559551 H3BRB1 525 aa15.73■□□□□ 0.11
RABGGTA-209ENST00000559551 CLIC2O15247 247 aa15.73■□□□□ 0.11
RABGGTA-209ENST00000559551 HBP1O60381 514 aa15.73■□□□□ 0.11
RABGGTA-209ENST00000559551 INSRRP14616 1297 aa15.73■□□□□ 0.11
RABGGTA-209ENST00000559551 PBX1P40424 430 aa15.73■□□□□ 0.11
RABGGTA-209ENST00000559551 BEX3Q00994 111 aa15.73■□□□□ 0.11
RABGGTA-209ENST00000559551 CACNB2Q08289 660 aaPredicted RBP15.73■□□□□ 0.11
RABGGTA-209ENST00000559551 EDRF1Q3B7T1 1238 aa15.73■□□□□ 0.11
RABGGTA-209ENST00000559551 MIIPQ5JXC2 388 aa15.73■□□□□ 0.11
RABGGTA-209ENST00000559551 LRRC71Q8N4P6 559 aa15.73■□□□□ 0.11
RABGGTA-209ENST00000559551 NOC3LQ8WTT2 800 aaKnown RBP15.73■□□□□ 0.11
RABGGTA-209ENST00000559551 SPIRE2Q8WWL2 714 aa15.73■□□□□ 0.11
RABGGTA-209ENST00000559551 VPS16Q9H269 839 aa15.73■□□□□ 0.11
RABGGTA-209ENST00000559551 TUT1Q9H6E5 874 aaKnown RBP15.73■□□□□ 0.11
RABGGTA-209ENST00000559551 FAM184BQ9ULE4 1060 aa15.73■□□□□ 0.11
RABGGTA-209ENST00000559551 TRPC6Q9Y210 931 aa15.73■□□□□ 0.11
RABGGTA-209ENST00000559551 FRMPD3Q5JV73 1810 aa15.72■□□□□ 0.11
RABGGTA-209ENST00000559551 C22orf31O95567 290 aa15.72■□□□□ 0.11
RABGGTA-209ENST00000559551 EEF1GP26641 437 aaKnown RBP15.72■□□□□ 0.11
RABGGTA-209ENST00000559551 FKBP3Q00688 224 aaKnown RBP15.72■□□□□ 0.11
RABGGTA-209ENST00000559551 MTERF4Q7Z6M4 381 aaKnown RBP15.72■□□□□ 0.11
RABGGTA-209ENST00000559551 TSG101Q99816 390 aa15.72■□□□□ 0.11
RABGGTA-209ENST00000559551 ARHGAP28Q9P2N2 729 aa15.72■□□□□ 0.11
RABGGTA-209ENST00000559551 CCDC169A6NNP5 214 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms