RNA–Protein interactions for RNA: ENST00000558685.1

SHF-204, Transcript of Src homology 2 domain containing F, humanhuman

TSL 4

Gene SHF, Length 597 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-204ENST00000558685 TMEM143Q96AN5 459 aa13.13□□□□□ -0.31
SHF-204ENST00000558685 ZNF689Q96CS4 500 aaPredicted RBP13.13□□□□□ -0.31
SHF-204ENST00000558685 ADAM2Q99965 735 aa13.13□□□□□ -0.31
SHF-204ENST00000558685 C17orf80Q9BSJ5 609 aa13.13□□□□□ -0.31
SHF-204ENST00000558685 BMP2KQ9NSY1 1161 aaPredicted RBP13.13□□□□□ -0.31
SHF-204ENST00000558685 A0A087WZ62 844 aa13.12□□□□□ -0.31
SHF-204ENST00000558685 C9IYK1 514 aa13.12□□□□□ -0.31
SHF-204ENST00000558685 H3BQV1 296 aa13.12□□□□□ -0.31
SHF-204ENST00000558685 GPR182O15218 404 aa13.12□□□□□ -0.31
SHF-204ENST00000558685 DGKIO75912 1065 aa13.12□□□□□ -0.31
SHF-204ENST00000558685 RFC5P40937 340 aa13.12□□□□□ -0.31
SHF-204ENST00000558685 RARRES1P49788 294 aa13.12□□□□□ -0.31
SHF-204ENST00000558685 GATMP50440 423 aa13.12□□□□□ -0.31
SHF-204ENST00000558685 FXR2P51116 673 aaKnown RBP eCLIP13.12□□□□□ -0.31
SHF-204ENST00000558685 FAM189BP81408 668 aa13.12□□□□□ -0.31
SHF-204ENST00000558685 EMC2Q15006 297 aa13.12□□□□□ -0.31
SHF-204ENST00000558685 OTUD6AQ7L8S5 288 aa13.12□□□□□ -0.31
SHF-204ENST00000558685 RHPN2Q8IUC4 686 aa13.12□□□□□ -0.31
SHF-204ENST00000558685 ZNF710Q8N1W2 664 aa13.12□□□□□ -0.31
SHF-204ENST00000558685 NEK9Q8TD19 979 aa13.12□□□□□ -0.31
SHF-204ENST00000558685 PRPF31Q8WWY3 499 aaKnown RBP13.12□□□□□ -0.31
SHF-204ENST00000558685 TGS1Q96RS0 853 aaKnown RBP13.12□□□□□ -0.31
SHF-204ENST00000558685 YME1L1Q96TA2 773 aa13.12□□□□□ -0.31
SHF-204ENST00000558685 FDXACB1Q9BRP7 624 aaPredicted RBP13.12□□□□□ -0.31
SHF-204ENST00000558685 POLR3CQ9BUI4 534 aaPredicted RBP13.12□□□□□ -0.31
SHF-204ENST00000558685 IFT122Q9HBG6 1241 aa13.12□□□□□ -0.31
SHF-204ENST00000558685 RGS18Q9NS28 235 aa13.12□□□□□ -0.31
SHF-204ENST00000558685 ANKEF1Q9NU02 776 aa13.12□□□□□ -0.31
SHF-204ENST00000558685 MTUS1Q9ULD2 1270 aa13.12□□□□□ -0.31
SHF-204ENST00000558685 PPME1Q9Y570 386 aa13.12□□□□□ -0.31
SHF-204ENST00000558685 A0A0C4DFX4 3053 aa13.12□□□□□ -0.31
SHF-204ENST00000558685 PP2D1A8MPX8 630 aa13.11□□□□□ -0.31
SHF-204ENST00000558685 K7ELQ4 463 aaPredicted RBP13.11□□□□□ -0.31
SHF-204ENST00000558685 XRCC6P12956 609 aaKnown RBP eCLIP13.11□□□□□ -0.31
SHF-204ENST00000558685 POU3F3P20264 500 aaPredicted RBP13.11□□□□□ -0.31
SHF-204ENST00000558685 RPA1P27694 616 aa13.11□□□□□ -0.31
SHF-204ENST00000558685 SARSP49591 514 aaKnown RBP13.11□□□□□ -0.31
SHF-204ENST00000558685 DNM2P50570 870 aa13.11□□□□□ -0.31
SHF-204ENST00000558685 POLGP54098 1239 aaPredicted RBP13.11□□□□□ -0.31
SHF-204ENST00000558685 GRB10Q13322 594 aa13.11□□□□□ -0.31
SHF-204ENST00000558685 RILPL1Q5EBL4 403 aa13.11□□□□□ -0.31
SHF-204ENST00000558685 POTEGQ6S5H5 508 aa13.11□□□□□ -0.31
SHF-204ENST00000558685 IGSF22Q8N9C0 903 aa13.11□□□□□ -0.31
SHF-204ENST00000558685 NLRP7Q8WX94 980 aa13.11□□□□□ -0.31
SHF-204ENST00000558685 SLC7A3Q8WY07 619 aa13.11□□□□□ -0.31
SHF-204ENST00000558685 SNX21Q969T3 373 aa13.11□□□□□ -0.31
SHF-204ENST00000558685 GAS2L1Q99501 681 aaPredicted RBP13.11□□□□□ -0.31
SHF-204ENST00000558685 MINDY3Q9H8M7 445 aa13.11□□□□□ -0.31
SHF-204ENST00000558685 TUFT1Q9NNX1 390 aa13.11□□□□□ -0.31
SHF-204ENST00000558685 MTCH2Q9Y6C9 303 aa13.11□□□□□ -0.31
SHF-204ENST00000558685 IGFBP4P22692 258 aa13.1□□□□□ -0.31
SHF-204ENST00000558685 CDC25AP30304 524 aa13.1□□□□□ -0.31
SHF-204ENST00000558685 ARL2P36404 184 aa13.1□□□□□ -0.31
SHF-204ENST00000558685 ATP2C1P98194 919 aaPredicted RBP13.1□□□□□ -0.31
SHF-204ENST00000558685 CDC42EP1Q00587 391 aa13.1□□□□□ -0.31
SHF-204ENST00000558685 LAMTOR4Q0VGL1 99 aa13.1□□□□□ -0.31
SHF-204ENST00000558685 PDIA5Q14554 519 aa13.1□□□□□ -0.31
SHF-204ENST00000558685 FAM43BQ6ZT52 329 aaPredicted RBP13.1□□□□□ -0.31
SHF-204ENST00000558685 SLC24A5Q71RS6 500 aa13.1□□□□□ -0.31
SHF-204ENST00000558685 FERMT3Q86UX7 667 aa13.1□□□□□ -0.31
SHF-204ENST00000558685 ZNF410Q86VK4 478 aa13.1□□□□□ -0.31
SHF-204ENST00000558685 NPAS4Q8IUM7 802 aa13.1□□□□□ -0.31
SHF-204ENST00000558685 INTS4Q96HW7 963 aaKnown RBP13.1□□□□□ -0.31
SHF-204ENST00000558685 NLRP4Q96MN2 994 aa13.1□□□□□ -0.31
SHF-204ENST00000558685 JPH2Q9BR39 696 aaPredicted RBP13.1□□□□□ -0.31
SHF-204ENST00000558685 MMTAG2Q9BU76 263 aaKnown RBP13.1□□□□□ -0.31
SHF-204ENST00000558685 GCOM2Q9BZD3 368 aaPredicted RBP13.1□□□□□ -0.31
SHF-204ENST00000558685 FOXD4L1Q9NU39 408 aa13.1□□□□□ -0.31
SHF-204ENST00000558685 RNF19AQ9NV58 838 aa13.1□□□□□ -0.31
SHF-204ENST00000558685 COL4A3BPQ9Y5P4 624 aa13.1□□□□□ -0.31
SHF-204ENST00000558685 MYO7AQ13402 2215 aa13.09□□□□□ -0.31
SHF-204ENST00000558685 REV3LO60673 3130 aa13.09□□□□□ -0.31
SHF-204ENST00000558685 ARID2Q68CP9 1835 aa13.09□□□□□ -0.31
SHF-204ENST00000558685 DENND3A2RUS2 1198 aa13.09□□□□□ -0.31
SHF-204ENST00000558685 SYT1P21579 422 aa13.09□□□□□ -0.31
SHF-204ENST00000558685 PRPHP41219 470 aa13.09□□□□□ -0.31
SHF-204ENST00000558685 EPC2Q52LR7 807 aa13.09□□□□□ -0.31
SHF-204ENST00000558685 ODR4Q5SWX8 454 aa13.09□□□□□ -0.31
SHF-204ENST00000558685 FAM102BQ5T8I3 360 aa13.09□□□□□ -0.31
SHF-204ENST00000558685 EXOC8Q8IYI6 725 aa13.09□□□□□ -0.31
SHF-204ENST00000558685 ASAP3Q8TDY4 903 aa13.09□□□□□ -0.31
SHF-204ENST00000558685 GDPD5Q8WTR4 605 aa13.09□□□□□ -0.31
SHF-204ENST00000558685 PSPC1Q8WXF1 523 aaKnown RBP13.09□□□□□ -0.31
SHF-204ENST00000558685 CLP1Q92989 425 aaKnown RBP13.09□□□□□ -0.31
SHF-204ENST00000558685 SCLT1Q96NL6 688 aa13.09□□□□□ -0.31
SHF-204ENST00000558685 MTRQ99707 1265 aa13.09□□□□□ -0.31
SHF-204ENST00000558685 PRDM6Q9NQX0 595 aa13.09□□□□□ -0.31
SHF-204ENST00000558685 C1orf112Q9NSG2 853 aa13.09□□□□□ -0.31
SHF-204ENST00000558685 LRWD1Q9UFC0 647 aa13.09□□□□□ -0.31
SHF-204ENST00000558685 DBR1Q9UK59 544 aaKnown RBP13.09□□□□□ -0.31
SHF-204ENST00000558685 ADGRA3Q8IWK6 1321 aa13.09□□□□□ -0.31
SHF-204ENST00000558685 LAD1O00515 517 aa13.08□□□□□ -0.32
SHF-204ENST00000558685 GAS2O43903 313 aaKnown RBP13.08□□□□□ -0.32
SHF-204ENST00000558685 DGAT1O75907 488 aa13.08□□□□□ -0.32
SHF-204ENST00000558685 SRGAP2CP0DJJ0 459 aa13.08□□□□□ -0.32
SHF-204ENST00000558685 ATF7P17544 494 aaPredicted RBP13.08□□□□□ -0.32
SHF-204ENST00000558685 IBSPP21815 317 aaPredicted RBP13.08□□□□□ -0.32
SHF-204ENST00000558685 CCT6AP40227 531 aaKnown RBP13.08□□□□□ -0.32
SHF-204ENST00000558685 CCDC85BQ15834 202 aaPredicted RBP13.08□□□□□ -0.32
SHF-204ENST00000558685 ZNF598Q86UK7 904 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms