RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 EHBP1Q8NDI1 1231 aa8.84□□□□□ -0.99
RTF1-205ENST00000558298 ENGASEQ8NFI3 743 aa8.84□□□□□ -0.99
RTF1-205ENST00000558298 ETNPPLQ8TBG4 499 aa8.84□□□□□ -0.99
RTF1-205ENST00000558298 TBCKQ8TEA7 893 aa8.84□□□□□ -0.99
RTF1-205ENST00000558298 AFG1LQ8WV93 481 aa8.84□□□□□ -0.99
RTF1-205ENST00000558298 P3H4Q92791 437 aa8.84□□□□□ -0.99
RTF1-205ENST00000558298 KAT2BQ92831 832 aa8.84□□□□□ -0.99
RTF1-205ENST00000558298 COPS5Q92905 334 aa8.84□□□□□ -0.99
RTF1-205ENST00000558298 DRC1Q96MC2 740 aa8.84□□□□□ -0.99
RTF1-205ENST00000558298 SPATA33Q96N06 139 aa8.84□□□□□ -0.99
RTF1-205ENST00000558298 PANX2Q96RD6 677 aa8.84□□□□□ -0.99
RTF1-205ENST00000558298 C16orf70Q9BSU1 422 aa8.84□□□□□ -0.99
RTF1-205ENST00000558298 XPO4Q9C0E2 1151 aaKnown RBP8.84□□□□□ -0.99
RTF1-205ENST00000558298 JPH1Q9HDC5 661 aaPredicted RBP8.84□□□□□ -0.99
RTF1-205ENST00000558298 KCNMB3Q9NPA1 279 aa8.84□□□□□ -0.99
RTF1-205ENST00000558298 ST7Q9NRC1 585 aa8.84□□□□□ -0.99
RTF1-205ENST00000558298 TMEM260Q9NX78 707 aa8.84□□□□□ -0.99
RTF1-205ENST00000558298 RTEL1Q9NZ71 1219 aa8.84□□□□□ -0.99
RTF1-205ENST00000558298 CDC23Q9UJX2 597 aa8.84□□□□□ -0.99
RTF1-205ENST00000558298 L1RE1Q9UN81 338 aa8.84□□□□□ -0.99
RTF1-205ENST00000558298 PPP2R2CQ9Y2T4 447 aa8.84□□□□□ -0.99
RTF1-205ENST00000558298 TRIP12Q14669 1992 aaPredicted RBP8.83□□□□□ -1
RTF1-205ENST00000558298 GOLGA6L7A0A1B0GV03 622 aa8.83□□□□□ -1
RTF1-205ENST00000558298 CCDC194A0A1B0GVG4 234 aa8.83□□□□□ -1
RTF1-205ENST00000558298 CTAGE15A4D2H0 777 aa8.83□□□□□ -1
RTF1-205ENST00000558298 IPO5O00410 1097 aaKnown RBP8.83□□□□□ -1
RTF1-205ENST00000558298 PQBP1O60828 265 aaKnown RBP8.83□□□□□ -1
RTF1-205ENST00000558298 ATP9AO75110 1047 aa8.83□□□□□ -1
RTF1-205ENST00000558298 MYCNP04198 464 aaPredicted RBP8.83□□□□□ -1
RTF1-205ENST00000558298 SUPT20HL2P0C7V6 817 aa8.83□□□□□ -1
RTF1-205ENST00000558298 CTAGE8P0CG41 777 aa8.83□□□□□ -1
RTF1-205ENST00000558298 NEFHP12036 1026 aa8.83□□□□□ -1
RTF1-205ENST00000558298 EPHB4P54760 987 aa8.83□□□□□ -1
RTF1-205ENST00000558298 UBASH3AP57075 661 aa8.83□□□□□ -1
RTF1-205ENST00000558298 MDM2Q00987 491 aaPredicted RBP8.83□□□□□ -1
RTF1-205ENST00000558298 KRT76Q01546 638 aa8.83□□□□□ -1
RTF1-205ENST00000558298 APBA1Q02410 837 aa8.83□□□□□ -1
RTF1-205ENST00000558298 CKAP4Q07065 602 aaKnown RBP8.83□□□□□ -1
RTF1-205ENST00000558298 IFFO1Q0D2I5 559 aa8.83□□□□□ -1
RTF1-205ENST00000558298 ITGB3BPQ13352 177 aaPredicted RBP8.83□□□□□ -1
RTF1-205ENST00000558298 ITGA7Q13683 1181 aa8.83□□□□□ -1
RTF1-205ENST00000558298 SAFBQ15424 915 aaKnown RBP eCLIP8.83□□□□□ -1
RTF1-205ENST00000558298 ZKSCAN8Q15776 578 aaPredicted RBP8.83□□□□□ -1
RTF1-205ENST00000558298 LRCH2Q5VUJ6 765 aa8.83□□□□□ -1
RTF1-205ENST00000558298 ARMCX5Q6P1M9 558 aa8.83□□□□□ -1
RTF1-205ENST00000558298 FAM43BQ6ZT52 329 aaPredicted RBP8.83□□□□□ -1
RTF1-205ENST00000558298 C11orf57Q6ZUT1 292 aaPredicted RBP8.83□□□□□ -1
RTF1-205ENST00000558298 CTAGE6Q86UF2 777 aa8.83□□□□□ -1
RTF1-205ENST00000558298 CTAGE4Q8IX94 777 aa8.83□□□□□ -1
RTF1-205ENST00000558298 DIS3L2Q8IYB7 885 aaKnown RBP8.83□□□□□ -1
RTF1-205ENST00000558298 GPATCH11Q8N954 259 aa8.83□□□□□ -1
RTF1-205ENST00000558298 C3orf20Q8ND61 904 aa8.83□□□□□ -1
RTF1-205ENST00000558298 CYP2W1Q8TAV3 490 aa8.83□□□□□ -1
RTF1-205ENST00000558298 MAGEC3Q8TD91 643 aa8.83□□□□□ -1
RTF1-205ENST00000558298 RASGRP4Q8TDF6 673 aa8.83□□□□□ -1
RTF1-205ENST00000558298 SEPT1Q8WYJ6 367 aa8.83□□□□□ -1
RTF1-205ENST00000558298 SLC5A5Q92911 643 aa8.83□□□□□ -1
RTF1-205ENST00000558298 VWCEQ96DN2 955 aa8.83□□□□□ -1
RTF1-205ENST00000558298 C8orf76Q96K31 380 aa8.83□□□□□ -1
RTF1-205ENST00000558298 FAM20AQ96MK3 541 aa8.83□□□□□ -1
RTF1-205ENST00000558298 CTAGE1Q96RT6 745 aa8.83□□□□□ -1
RTF1-205ENST00000558298 BAG1Q99933 345 aaPredicted RBP8.83□□□□□ -1
RTF1-205ENST00000558298 MLXIPQ9HAP2 919 aa8.83□□□□□ -1
RTF1-205ENST00000558298 IFNKQ9P0W0 207 aa8.83□□□□□ -1
RTF1-205ENST00000558298 SLC9A2Q9UBY0 812 aa8.83□□□□□ -1
RTF1-205ENST00000558298 SUFUQ9UMX1 484 aa8.83□□□□□ -1
RTF1-205ENST00000558298 KCNJ14Q9UNX9 436 aa8.83□□□□□ -1
RTF1-205ENST00000558298 IGSF9BQ9UPX0 1349 aa8.82□□□□□ -1
RTF1-205ENST00000558298 CDH23Q9H251 3354 aa8.82□□□□□ -1
RTF1-205ENST00000558298 CTAGE9A4FU28 777 aa8.82□□□□□ -1
RTF1-205ENST00000558298 GOLGA8KD6RF30 607 aa8.82□□□□□ -1
RTF1-205ENST00000558298 PITPNM1O00562 1244 aa8.82□□□□□ -1
RTF1-205ENST00000558298 NOP56O00567 594 aaKnown RBP8.82□□□□□ -1
RTF1-205ENST00000558298 OPA1O60313 960 aa8.82□□□□□ -1
RTF1-205ENST00000558298 CUTAO60888 179 aa8.82□□□□□ -1
RTF1-205ENST00000558298 PPFIA3O75145 1194 aa8.82□□□□□ -1
RTF1-205ENST00000558298 CAND2O75155 1236 aa8.82□□□□□ -1
RTF1-205ENST00000558298 PSMD10O75832 226 aa8.82□□□□□ -1
RTF1-205ENST00000558298 SASH3O75995 380 aa8.82□□□□□ -1
RTF1-205ENST00000558298 SERPINC1P01008 464 aa8.82□□□□□ -1
RTF1-205ENST00000558298 LGALS2P05162 132 aa8.82□□□□□ -1
RTF1-205ENST00000558298 SFNP31947 248 aa8.82□□□□□ -1
RTF1-205ENST00000558298 ME1P48163 572 aa8.82□□□□□ -1
RTF1-205ENST00000558298 CDR1P51861 262 aa8.82□□□□□ -1
RTF1-205ENST00000558298 FANCCQ00597 558 aa8.82□□□□□ -1
RTF1-205ENST00000558298 PPFIA1Q13136 1202 aa8.82□□□□□ -1
RTF1-205ENST00000558298 PPP2R5CQ13362 524 aa8.82□□□□□ -1
RTF1-205ENST00000558298 CRYMQ14894 314 aa8.82□□□□□ -1
RTF1-205ENST00000558298 SF3A1Q15459 793 aaKnown RBP8.82□□□□□ -1
RTF1-205ENST00000558298 RASIP1Q5U651 963 aa8.82□□□□□ -1
RTF1-205ENST00000558298 GPR153Q6NV75 609 aa8.82□□□□□ -1
RTF1-205ENST00000558298 CYFIP1Q7L576 1253 aa8.82□□□□□ -1
RTF1-205ENST00000558298 PLPPR4Q7Z2D5 763 aa8.82□□□□□ -1
RTF1-205ENST00000558298 KIAA1328Q86T90 577 aa8.82□□□□□ -1
RTF1-205ENST00000558298 FMR1NBQ8N0W7 255 aaPredicted RBP8.82□□□□□ -1
RTF1-205ENST00000558298 CNPY4Q8N129 248 aa8.82□□□□□ -1
RTF1-205ENST00000558298 FSIP1Q8NA03 581 aa8.82□□□□□ -1
RTF1-205ENST00000558298 FAM76AQ8TAV0 307 aa8.82□□□□□ -1
RTF1-205ENST00000558298 BADQ92934 168 aa8.82□□□□□ -1
RTF1-205ENST00000558298 PGBD1Q96JS3 809 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms