RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 KANK3Q6NY19 840 aa11.62□□□□□ -0.55
LRRC28-204ENST00000558172 LRRC15Q8TF66 581 aa11.62□□□□□ -0.55
LRRC28-204ENST00000558172 KIFAP3Q92845 792 aa11.62□□□□□ -0.55
LRRC28-204ENST00000558172 ZBTB10Q96DT7 871 aa11.62□□□□□ -0.55
LRRC28-204ENST00000558172 DRC1Q96MC2 740 aa11.62□□□□□ -0.55
LRRC28-204ENST00000558172 FAM49AQ9H0Q0 323 aaPredicted RBP11.62□□□□□ -0.55
LRRC28-204ENST00000558172 C17orf75Q9HAS0 396 aa11.62□□□□□ -0.55
LRRC28-204ENST00000558172 XPNPEP1Q9NQW7 623 aa11.62□□□□□ -0.55
LRRC28-204ENST00000558172 KBTBD4Q9NVX7 518 aa11.62□□□□□ -0.55
LRRC28-204ENST00000558172 ODF2LQ9ULJ1 636 aa11.62□□□□□ -0.55
LRRC28-204ENST00000558172 SQORQ9Y6N5 450 aa11.62□□□□□ -0.55
LRRC28-204ENST00000558172 SIP14410 1827 aa11.62□□□□□ -0.55
LRRC28-204ENST00000558172 LTBP2Q14767 1821 aa11.61□□□□□ -0.55
LRRC28-204ENST00000558172 TRIM43BA6NCK2 446 aa11.61□□□□□ -0.55
LRRC28-204ENST00000558172 GADD45BO75293 160 aaPredicted RBP11.61□□□□□ -0.55
LRRC28-204ENST00000558172 ZNF202O95125 648 aa11.61□□□□□ -0.55
LRRC28-204ENST00000558172 KRT18P05783 430 aaKnown RBP11.61□□□□□ -0.55
LRRC28-204ENST00000558172 MYL1P05976 194 aa11.61□□□□□ -0.55
LRRC28-204ENST00000558172 IQCF3P0C7M6 154 aa11.61□□□□□ -0.55
LRRC28-204ENST00000558172 RFC2P35250 354 aa11.61□□□□□ -0.55
LRRC28-204ENST00000558172 CRYBB1P53674 252 aaPredicted RBP11.61□□□□□ -0.55
LRRC28-204ENST00000558172 FAM160A1Q05DH4 1040 aa11.61□□□□□ -0.55
LRRC28-204ENST00000558172 POU5F1BQ06416 359 aa11.61□□□□□ -0.55
LRRC28-204ENST00000558172 TFDP1Q14186 410 aa11.61□□□□□ -0.55
LRRC28-204ENST00000558172 PPP2R5AQ15172 486 aa11.61□□□□□ -0.55
LRRC28-204ENST00000558172 TPRNQ4KMQ1 711 aa11.61□□□□□ -0.55
LRRC28-204ENST00000558172 ARSHQ5FYA8 562 aa11.61□□□□□ -0.55
LRRC28-204ENST00000558172 ZNF618Q5T7W0 954 aa11.61□□□□□ -0.55
LRRC28-204ENST00000558172 FAM102BQ5T8I3 360 aa11.61□□□□□ -0.55
LRRC28-204ENST00000558172 MFSD5Q6N075 450 aa11.61□□□□□ -0.55
LRRC28-204ENST00000558172 FAM43BQ6ZT52 329 aaPredicted RBP11.61□□□□□ -0.55
LRRC28-204ENST00000558172 LRRC8DQ7L1W4 858 aa11.61□□□□□ -0.55
LRRC28-204ENST00000558172 SH3RF1Q7Z6J0 888 aa11.61□□□□□ -0.55
LRRC28-204ENST00000558172 ZNF410Q86VK4 478 aa11.61□□□□□ -0.55
LRRC28-204ENST00000558172 GPBP1Q86WP2 473 aa11.61□□□□□ -0.55
LRRC28-204ENST00000558172 RHPN2Q8IUC4 686 aa11.61□□□□□ -0.55
LRRC28-204ENST00000558172 FMR1NBQ8N0W7 255 aaPredicted RBP11.61□□□□□ -0.55
LRRC28-204ENST00000558172 TMEM199Q8N511 208 aa11.61□□□□□ -0.55
LRRC28-204ENST00000558172 TET1Q8NFU7 2136 aa11.61□□□□□ -0.55
LRRC28-204ENST00000558172 PRPF31Q8WWY3 499 aaKnown RBP11.61□□□□□ -0.55
LRRC28-204ENST00000558172 WNT8BQ93098 351 aa11.61□□□□□ -0.55
LRRC28-204ENST00000558172 TMEM143Q96AN5 459 aa11.61□□□□□ -0.55
LRRC28-204ENST00000558172 TRIM43Q96BQ3 446 aaPredicted RBP11.61□□□□□ -0.55
LRRC28-204ENST00000558172 IFT74Q96LB3 600 aa11.61□□□□□ -0.55
LRRC28-204ENST00000558172 RUSC1Q9BVN2 902 aa11.61□□□□□ -0.55
LRRC28-204ENST00000558172 CELF4Q9BZC1 486 aaKnown RBP11.61□□□□□ -0.55
LRRC28-204ENST00000558172 PPP1R12CQ9BZL4 782 aa11.61□□□□□ -0.55
LRRC28-204ENST00000558172 SERTAD1Q9UHV2 236 aa11.61□□□□□ -0.55
LRRC28-204ENST00000558172 COL4A3BPQ9Y5P4 624 aa11.61□□□□□ -0.55
LRRC28-204ENST00000558172 TRPV2Q9Y5S1 764 aa11.61□□□□□ -0.55
LRRC28-204ENST00000558172 ACTN4O43707 911 aaKnown RBP11.6□□□□□ -0.55
LRRC28-204ENST00000558172 VTNP04004 478 aa11.6□□□□□ -0.55
LRRC28-204ENST00000558172 GPC3P51654 580 aa11.6□□□□□ -0.55
LRRC28-204ENST00000558172 NLRP11P59045 1033 aaKnown RBP11.6□□□□□ -0.55
LRRC28-204ENST00000558172 MLLT1Q03111 559 aaPredicted RBP11.6□□□□□ -0.55
LRRC28-204ENST00000558172 MGAT3Q09327 533 aa11.6□□□□□ -0.55
LRRC28-204ENST00000558172 LAMTOR4Q0VGL1 99 aa11.6□□□□□ -0.55
LRRC28-204ENST00000558172 DRP2Q13474 957 aa11.6□□□□□ -0.55
LRRC28-204ENST00000558172 GIT2Q14161 759 aa11.6□□□□□ -0.55
LRRC28-204ENST00000558172 LONRF3Q496Y0 759 aa11.6□□□□□ -0.55
LRRC28-204ENST00000558172 ODR4Q5SWX8 454 aa11.6□□□□□ -0.55
LRRC28-204ENST00000558172 KRBA2Q6ZNG9 492 aa11.6□□□□□ -0.55
LRRC28-204ENST00000558172 MAEAQ7L5Y9 396 aa11.6□□□□□ -0.55
LRRC28-204ENST00000558172 RPUSD2Q8IZ73 545 aaKnown RBP11.6□□□□□ -0.55
LRRC28-204ENST00000558172 USP38Q8NB14 1042 aa11.6□□□□□ -0.55
LRRC28-204ENST00000558172 CNNM3Q8NE01 707 aa11.6□□□□□ -0.55
LRRC28-204ENST00000558172 ENGASEQ8NFI3 743 aa11.6□□□□□ -0.55
LRRC28-204ENST00000558172 TIGD1Q96MW7 591 aa11.6□□□□□ -0.55
LRRC28-204ENST00000558172 C7orf25Q9BPX7 421 aa11.6□□□□□ -0.55
LRRC28-204ENST00000558172 INO80BQ9C086 356 aaPredicted RBP11.6□□□□□ -0.55
LRRC28-204ENST00000558172 POLR3FQ9H1D9 316 aaPredicted RBP11.6□□□□□ -0.55
LRRC28-204ENST00000558172 GOLPH3LQ9H4A5 285 aa11.6□□□□□ -0.55
LRRC28-204ENST00000558172 CDY2AQ9Y6F7 541 aa11.6□□□□□ -0.55
LRRC28-204ENST00000558172 MKI67P46013 3256 aaKnown RBP11.59□□□□□ -0.55
LRRC28-204ENST00000558172 MYMKA6NI61 221 aa11.59□□□□□ -0.55
LRRC28-204ENST00000558172 HIP1RO75146 1068 aa11.59□□□□□ -0.55
LRRC28-204ENST00000558172 GPR32O75388 356 aa11.59□□□□□ -0.55
LRRC28-204ENST00000558172 CHRNA1P02708 482 aa11.59□□□□□ -0.55
LRRC28-204ENST00000558172 CTSHP09668 335 aa11.59□□□□□ -0.55
LRRC28-204ENST00000558172 GLRA2P23416 452 aa11.59□□□□□ -0.55
LRRC28-204ENST00000558172 CYP2C18P33260 490 aa11.59□□□□□ -0.55
LRRC28-204ENST00000558172 NAMPTP43490 491 aa11.59□□□□□ -0.55
LRRC28-204ENST00000558172 CCL23P55773 120 aa11.59□□□□□ -0.55
LRRC28-204ENST00000558172 TMEM62Q0P6H9 643 aa11.59□□□□□ -0.55
LRRC28-204ENST00000558172 SNW1Q13573 536 aaKnown RBP11.59□□□□□ -0.55
LRRC28-204ENST00000558172 KIZQ2M2Z5 673 aa11.59□□□□□ -0.55
LRRC28-204ENST00000558172 CNNM4Q6P4Q7 775 aa11.59□□□□□ -0.55
LRRC28-204ENST00000558172 TRAF7Q6Q0C0 670 aa11.59□□□□□ -0.55
LRRC28-204ENST00000558172 ELOA2Q8IYF1 753 aaPredicted RBP11.59□□□□□ -0.55
LRRC28-204ENST00000558172 NLRP7Q8WX94 980 aa11.59□□□□□ -0.55
LRRC28-204ENST00000558172 DDX12PQ92771 950 aa11.59□□□□□ -0.55
LRRC28-204ENST00000558172 LBHD1Q9BQE6 289 aaPredicted RBP11.59□□□□□ -0.55
LRRC28-204ENST00000558172 REEP2Q9BRK0 252 aa11.59□□□□□ -0.55
LRRC28-204ENST00000558172 NFKBIZQ9BYH8 718 aa11.59□□□□□ -0.55
LRRC28-204ENST00000558172 GCOM2Q9BZD3 368 aaPredicted RBP11.59□□□□□ -0.55
LRRC28-204ENST00000558172 WNT8AQ9H1J5 351 aa11.59□□□□□ -0.55
LRRC28-204ENST00000558172 ADAMTS10Q9H324 1103 aa11.59□□□□□ -0.55
LRRC28-204ENST00000558172 PARVGQ9HBI0 331 aa11.59□□□□□ -0.55
LRRC28-204ENST00000558172 GPRC5CQ9NQ84 441 aa11.59□□□□□ -0.55
LRRC28-204ENST00000558172 LMBRD1Q9NUN5 540 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 154.4 ms