RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 MYH11P35749 1972 aa11.86□□□□□ -0.51
SEMA4B-204ENST00000558065 PASKQ96RG2 1323 aa11.86□□□□□ -0.51
SEMA4B-204ENST00000558065 QRICH2Q9H0J4 1663 aa11.86□□□□□ -0.51
SEMA4B-204ENST00000558065 BICDL2A1A5D9 508 aa11.86□□□□□ -0.51
SEMA4B-204ENST00000558065 GJB6O95452 261 aa11.86□□□□□ -0.51
SEMA4B-204ENST00000558065 GNA11P29992 359 aa11.86□□□□□ -0.51
SEMA4B-204ENST00000558065 KCTD21Q4G0X4 260 aa11.86□□□□□ -0.51
SEMA4B-204ENST00000558065 ANKMY2Q8IV38 441 aa11.86□□□□□ -0.51
SEMA4B-204ENST00000558065 CEP70Q8NHQ1 597 aa11.86□□□□□ -0.51
SEMA4B-204ENST00000558065 KRT82Q9NSB4 513 aa11.86□□□□□ -0.51
SEMA4B-204ENST00000558065 CLIC4Q9Y696 253 aa11.86□□□□□ -0.51
SEMA4B-204ENST00000558065 RCCD1A6NED2 376 aa11.86□□□□□ -0.51
SEMA4B-204ENST00000558065 SMIM23A6NLE4 172 aa11.86□□□□□ -0.51
SEMA4B-204ENST00000558065 PABPC1P11940 636 aaKnown RBP11.86□□□□□ -0.51
SEMA4B-204ENST00000558065 RPS6KB1P23443 525 aa11.86□□□□□ -0.51
SEMA4B-204ENST00000558065 SPOPLQ6IQ16 392 aa11.86□□□□□ -0.51
SEMA4B-204ENST00000558065 LRRC74BQ6ZQY2 392 aa11.86□□□□□ -0.51
SEMA4B-204ENST00000558065 METTL16Q86W50 562 aaKnown RBP11.86□□□□□ -0.51
SEMA4B-204ENST00000558065 NUTM2AQ8IVF1 878 aaPredicted RBP11.86□□□□□ -0.51
SEMA4B-204ENST00000558065 STK39Q9UEW8 545 aa11.86□□□□□ -0.51
SEMA4B-204ENST00000558065 ADD3Q9UEY8 706 aaKnown RBP11.86□□□□□ -0.51
SEMA4B-204ENST00000558065 CD2APQ9Y5K6 639 aa11.86□□□□□ -0.51
SEMA4B-204ENST00000558065 IQGAP3Q86VI3 1631 aa11.86□□□□□ -0.51
SEMA4B-204ENST00000558065 FAM25EA8MYX2 175 aa11.86□□□□□ -0.51
SEMA4B-204ENST00000558065 PARNO95453 639 aaKnown RBP11.86□□□□□ -0.51
SEMA4B-204ENST00000558065 ECHS1P30084 290 aa11.86□□□□□ -0.51
SEMA4B-204ENST00000558065 SLC16A10Q8TF71 515 aa11.86□□□□□ -0.51
SEMA4B-204ENST00000558065 DGCR14Q96DF8 476 aaKnown RBP11.86□□□□□ -0.51
SEMA4B-204ENST00000558065 ZNHIT2Q9UHR6 403 aa11.86□□□□□ -0.51
SEMA4B-204ENST00000558065 TMEM114B3SHH9 223 aa11.85□□□□□ -0.51
SEMA4B-204ENST00000558065 HEXIM1O94992 359 aaKnown RBP11.85□□□□□ -0.51
SEMA4B-204ENST00000558065 FOSBP53539 338 aa11.85□□□□□ -0.51
SEMA4B-204ENST00000558065 LPIN2Q92539 896 aa11.85□□□□□ -0.51
SEMA4B-204ENST00000558065 MED30Q96HR3 178 aa11.85□□□□□ -0.51
SEMA4B-204ENST00000558065 ZNF184Q99676 751 aaPredicted RBP11.85□□□□□ -0.51
SEMA4B-204ENST00000558065 CDK19Q9BWU1 502 aa11.85□□□□□ -0.51
SEMA4B-204ENST00000558065 EID1Q9Y6B2 187 aa11.85□□□□□ -0.51
SEMA4B-204ENST00000558065 TAF6LQ9Y6J9 622 aa11.85□□□□□ -0.51
SEMA4B-204ENST00000558065 PTPRTO14522 1441 aa11.85□□□□□ -0.51
SEMA4B-204ENST00000558065 COL6A1P12109 1028 aa11.85□□□□□ -0.51
SEMA4B-204ENST00000558065 RASSF7Q02833 373 aa11.85□□□□□ -0.51
SEMA4B-204ENST00000558065 KCNA1Q09470 495 aa11.85□□□□□ -0.51
SEMA4B-204ENST00000558065 PSKH2Q96QS6 385 aa11.85□□□□□ -0.51
SEMA4B-204ENST00000558065 LACRTQ9GZZ8 138 aa11.85□□□□□ -0.51
SEMA4B-204ENST00000558065 SPHKAPQ2M3C7 1700 aa11.85□□□□□ -0.51
SEMA4B-204ENST00000558065 PIM1P11309 404 aaPredicted RBP11.84□□□□□ -0.51
SEMA4B-204ENST00000558065 TCEA1P23193 301 aaKnown RBP11.84□□□□□ -0.51
SEMA4B-204ENST00000558065 KHDC1Q4VXA5 237 aaKnown RBP11.84□□□□□ -0.51
SEMA4B-204ENST00000558065 IFNLR1Q8IU57 520 aaPredicted RBP11.84□□□□□ -0.51
SEMA4B-204ENST00000558065 CRNNQ9UBG3 495 aaPredicted RBP11.84□□□□□ -0.51
SEMA4B-204ENST00000558065 IKBKGQ9Y6K9 419 aa11.84□□□□□ -0.51
SEMA4B-204ENST00000558065 RNASEH1O60930 286 aaKnown RBP11.84□□□□□ -0.51
SEMA4B-204ENST00000558065 PRLRP16471 622 aa11.84□□□□□ -0.51
SEMA4B-204ENST00000558065 CMA1P23946 247 aa11.84□□□□□ -0.51
SEMA4B-204ENST00000558065 PCSK6P29122 969 aa11.84□□□□□ -0.51
SEMA4B-204ENST00000558065 CDC25AP30304 524 aa11.84□□□□□ -0.51
SEMA4B-204ENST00000558065 MGAT5Q09328 741 aa11.84□□□□□ -0.51
SEMA4B-204ENST00000558065 AP1B1Q10567 949 aa11.84□□□□□ -0.51
SEMA4B-204ENST00000558065 TRIM29Q14134 588 aa11.84□□□□□ -0.51
SEMA4B-204ENST00000558065 SPCS2Q15005 226 aa11.84□□□□□ -0.51
SEMA4B-204ENST00000558065 ANO5Q75V66 913 aa11.84□□□□□ -0.51
SEMA4B-204ENST00000558065 PHLDB2Q86SQ0 1253 aa11.84□□□□□ -0.51
SEMA4B-204ENST00000558065 C8orf58Q8NAV2 365 aa11.84□□□□□ -0.51
SEMA4B-204ENST00000558065 HCAR2Q8TDS4 363 aa11.84□□□□□ -0.51
SEMA4B-204ENST00000558065 GIPC3Q8TF64 312 aa11.84□□□□□ -0.51
SEMA4B-204ENST00000558065 RUFY2Q8WXA3 655 aa11.84□□□□□ -0.51
SEMA4B-204ENST00000558065 FAM20AQ96MK3 541 aa11.84□□□□□ -0.51
SEMA4B-204ENST00000558065 CEP63Q96MT8 703 aa11.84□□□□□ -0.51
SEMA4B-204ENST00000558065 IFT122Q9HBG6 1241 aa11.84□□□□□ -0.51
SEMA4B-204ENST00000558065 METTL5Q9NRN9 209 aaKnown RBP11.84□□□□□ -0.51
SEMA4B-204ENST00000558065 O00370 1275 aa11.84□□□□□ -0.51
SEMA4B-204ENST00000558065 IGHMBP2P38935 993 aaKnown RBP11.84□□□□□ -0.51
SEMA4B-204ENST00000558065 PRKCIP41743 596 aa11.84□□□□□ -0.51
SEMA4B-204ENST00000558065 CD300CQ08708 224 aa11.84□□□□□ -0.51
SEMA4B-204ENST00000558065 ANKRD13AQ8IZ07 590 aa11.84□□□□□ -0.51
SEMA4B-204ENST00000558065 ST13P4Q8IZP2 240 aaPredicted RBP11.84□□□□□ -0.51
SEMA4B-204ENST00000558065 LSMEM1Q8N8F7 131 aa11.84□□□□□ -0.51
SEMA4B-204ENST00000558065 DDHD1Q8NEL9 900 aa11.84□□□□□ -0.51
SEMA4B-204ENST00000558065 TBC1D16Q8TBP0 767 aa11.84□□□□□ -0.51
SEMA4B-204ENST00000558065 HPSEQ9Y251 543 aa11.84□□□□□ -0.51
SEMA4B-204ENST00000558065 RBMX2Q9Y388 322 aaKnown RBP11.84□□□□□ -0.51
SEMA4B-204ENST00000558065 PCDHA5Q9Y5H7 936 aa11.84□□□□□ -0.51
SEMA4B-204ENST00000558065 ERVV-2B6SEH9 535 aa11.83□□□□□ -0.51
SEMA4B-204ENST00000558065 CTNNA1P35221 906 aaKnown RBP11.83□□□□□ -0.51
SEMA4B-204ENST00000558065 BCAP31P51572 246 aa11.83□□□□□ -0.51
SEMA4B-204ENST00000558065 MAP3K10Q02779 954 aa11.83□□□□□ -0.51
SEMA4B-204ENST00000558065 SLC9C2Q5TAH2 1124 aa11.83□□□□□ -0.51
SEMA4B-204ENST00000558065 DDX42Q86XP3 938 aaKnown RBP eCLIP11.83□□□□□ -0.51
SEMA4B-204ENST00000558065 SAMD14Q8IZD0 417 aaPredicted RBP11.83□□□□□ -0.51
SEMA4B-204ENST00000558065 TMEM237Q96Q45 408 aa11.83□□□□□ -0.51
SEMA4B-204ENST00000558065 PRKAG3Q9UGI9 489 aa11.83□□□□□ -0.51
SEMA4B-204ENST00000558065 DNAJC16Q9Y2G8 782 aa11.83□□□□□ -0.51
SEMA4B-204ENST00000558065 PCDHGA8Q9Y5G5 932 aa11.83□□□□□ -0.51
SEMA4B-204ENST00000558065 DUOX2Q9NRD8 1548 aa11.83□□□□□ -0.51
SEMA4B-204ENST00000558065 HLTFQ14527 1009 aaKnown RBP eCLIP11.83□□□□□ -0.52
SEMA4B-204ENST00000558065 WTAPQ15007 396 aa11.83□□□□□ -0.52
SEMA4B-204ENST00000558065 CDONQ4KMG0 1287 aa11.83□□□□□ -0.52
SEMA4B-204ENST00000558065 RHOT2Q8IXI1 618 aa11.83□□□□□ -0.52
SEMA4B-204ENST00000558065 AGGF1Q8N302 714 aaeCLIP11.83□□□□□ -0.52
SEMA4B-204ENST00000558065 SGCDQ92629 289 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms