RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 CD52P31358 61 aa15.95■□□□□ 0.14
USP3-205ENST00000557884 ME1P48163 572 aa15.95■□□□□ 0.14
USP3-205ENST00000557884 KRT85P78386 507 aa15.95■□□□□ 0.14
USP3-205ENST00000557884 PLEKHG4Q58EX7 1191 aa15.95■□□□□ 0.14
USP3-205ENST00000557884 CNKSR3Q6P9H4 555 aa15.95■□□□□ 0.14
USP3-205ENST00000557884 KCNG4Q8TDN1 519 aa15.95■□□□□ 0.14
USP3-205ENST00000557884 LRRC15Q8TF66 581 aa15.95■□□□□ 0.14
USP3-205ENST00000557884 TMEM40Q8WWA1 233 aa15.95■□□□□ 0.14
USP3-205ENST00000557884 PRPF31Q8WWY3 499 aaKnown RBP15.95■□□□□ 0.14
USP3-205ENST00000557884 NLRP7Q8WX94 980 aa15.95■□□□□ 0.14
USP3-205ENST00000557884 PSPC1Q8WXF1 523 aaKnown RBP15.95■□□□□ 0.14
USP3-205ENST00000557884 HERVK_113Q902F9 699 aa15.95■□□□□ 0.14
USP3-205ENST00000557884 SEPT8Q92599 483 aa15.95■□□□□ 0.14
USP3-205ENST00000557884 NLRP4Q96MN2 994 aa15.95■□□□□ 0.14
USP3-205ENST00000557884 IFIH1Q9BYX4 1025 aaKnown RBP15.95■□□□□ 0.14
USP3-205ENST00000557884 NT5C3AQ9H0P0 336 aa15.95■□□□□ 0.14
USP3-205ENST00000557884 ADAMTS10Q9H324 1103 aa15.95■□□□□ 0.14
USP3-205ENST00000557884 POLD4Q9HCU8 107 aa15.95■□□□□ 0.14
USP3-205ENST00000557884 GPRC5CQ9NQ84 441 aa15.95■□□□□ 0.14
USP3-205ENST00000557884 NOC2LQ9Y3T9 749 aaKnown RBP15.95■□□□□ 0.14
USP3-205ENST00000557884 ATP6V1DQ9Y5K8 247 aa15.95■□□□□ 0.14
USP3-205ENST00000557884 COL4A3BPQ9Y5P4 624 aa15.95■□□□□ 0.14
USP3-205ENST00000557884 MYH9P35579 1960 aaKnown RBP15.95■□□□□ 0.14
USP3-205ENST00000557884 GAS2O43903 313 aaKnown RBP15.94■□□□□ 0.14
USP3-205ENST00000557884 SRGAP2CP0DJJ0 459 aa15.94■□□□□ 0.14
USP3-205ENST00000557884 TXLNAP40222 546 aa15.94■□□□□ 0.14
USP3-205ENST00000557884 CRYBB1P53674 252 aaPredicted RBP15.94■□□□□ 0.14
USP3-205ENST00000557884 LAMTOR4Q0VGL1 99 aa15.94■□□□□ 0.14
USP3-205ENST00000557884 FAM102BQ5T8I3 360 aa15.94■□□□□ 0.14
USP3-205ENST00000557884 TSHZ1Q6ZSZ6 1077 aa15.94■□□□□ 0.14
USP3-205ENST00000557884 ASAP3Q8TDY4 903 aa15.94■□□□□ 0.14
USP3-205ENST00000557884 LEO1Q8WVC0 666 aaPredicted RBP15.94■□□□□ 0.14
USP3-205ENST00000557884 TCP11Q8WWU5 503 aa15.94■□□□□ 0.14
USP3-205ENST00000557884 RUSC1Q9BVN2 902 aa15.94■□□□□ 0.14
USP3-205ENST00000557884 PANK2Q9BZ23 570 aa15.94■□□□□ 0.14
USP3-205ENST00000557884 CCSER1Q9C0I3 900 aa15.94■□□□□ 0.14
USP3-205ENST00000557884 POLR3FQ9H1D9 316 aaPredicted RBP15.94■□□□□ 0.14
USP3-205ENST00000557884 RCOR1Q9UKL0 485 aa15.94■□□□□ 0.14
USP3-205ENST00000557884 TANC1Q9C0D5 1861 aa15.93■□□□□ 0.14
USP3-205ENST00000557884 A0A087WZ62 844 aa15.93■□□□□ 0.14
USP3-205ENST00000557884 SLC26A4O43511 780 aa15.93■□□□□ 0.14
USP3-205ENST00000557884 CUTAO60888 179 aa15.93■□□□□ 0.14
USP3-205ENST00000557884 CSDE1O75534 798 aaKnown RBP15.93■□□□□ 0.14
USP3-205ENST00000557884 RPS6KA5O75582 802 aa15.93■□□□□ 0.14
USP3-205ENST00000557884 PLA2G4BP0C869 781 aa15.93■□□□□ 0.14
USP3-205ENST00000557884 CYP11B2P19099 503 aa15.93■□□□□ 0.14
USP3-205ENST00000557884 ARL2P36404 184 aa15.93■□□□□ 0.14
USP3-205ENST00000557884 PAK2Q13177 524 aa15.93■□□□□ 0.14
USP3-205ENST00000557884 DHX8Q14562 1220 aaKnown RBP15.93■□□□□ 0.14
USP3-205ENST00000557884 MCPH1Q8NEM0 835 aa15.93■□□□□ 0.14
USP3-205ENST00000557884 SPATA32Q96LK8 384 aa15.93■□□□□ 0.14
USP3-205ENST00000557884 FDXACB1Q9BRP7 624 aaPredicted RBP15.93■□□□□ 0.14
USP3-205ENST00000557884 MTIF3Q9H2K0 278 aaKnown RBP15.93■□□□□ 0.14
USP3-205ENST00000557884 GDPD2Q9HCC8 539 aa15.93■□□□□ 0.14
USP3-205ENST00000557884 PADI3Q9ULW8 664 aa15.93■□□□□ 0.14
USP3-205ENST00000557884 PCDHA7Q9UN72 937 aa15.93■□□□□ 0.14
USP3-205ENST00000557884 TRIOBPQ9H2D6 2365 aa15.93■□□□□ 0.14
USP3-205ENST00000557884 KAT6AQ92794 2004 aa15.92■□□□□ 0.14
USP3-205ENST00000557884 A0A1W2PPC1 479 aa15.92■□□□□ 0.14
USP3-205ENST00000557884 FGFR4P22455 802 aa15.92■□□□□ 0.14
USP3-205ENST00000557884 EIF4BP23588 611 aaKnown RBP15.92■□□□□ 0.14
USP3-205ENST00000557884 RAD51AP2Q09MP3 1159 aa15.92■□□□□ 0.14
USP3-205ENST00000557884 NFX1Q12986 1120 aaKnown RBP15.92■□□□□ 0.14
USP3-205ENST00000557884 IKBKEQ14164 716 aa15.92■□□□□ 0.14
USP3-205ENST00000557884 TPRNQ4KMQ1 711 aa15.92■□□□□ 0.14
USP3-205ENST00000557884 AXDND1Q5T1B0 1012 aaPredicted RBP15.92■□□□□ 0.14
USP3-205ENST00000557884 RASIP1Q5U651 963 aa15.92■□□□□ 0.14
USP3-205ENST00000557884 FAM109BQ6ICB4 259 aaPredicted RBP15.92■□□□□ 0.14
USP3-205ENST00000557884 SHC4Q6S5L8 630 aa15.92■□□□□ 0.14
USP3-205ENST00000557884 FAM228AQ86W67 206 aa15.92■□□□□ 0.14
USP3-205ENST00000557884 GCOM2Q9BZD3 368 aaPredicted RBP15.92■□□□□ 0.14
USP3-205ENST00000557884 CCDC39Q9UFE4 941 aa15.92■□□□□ 0.14
USP3-205ENST00000557884 CIZ1Q9ULV3 898 aaPredicted RBP15.92■□□□□ 0.14
USP3-205ENST00000557884 ST3GAL5Q9UNP4 418 aa15.92■□□□□ 0.14
USP3-205ENST00000557884 SLC4A7Q9Y6M7 1214 aa15.92■□□□□ 0.14
USP3-205ENST00000557884 SCN5AQ14524 2016 aa15.92■□□□□ 0.14
USP3-205ENST00000557884 BAIAP3O94812 1187 aa15.91■□□□□ 0.14
USP3-205ENST00000557884 DARSP14868 501 aaKnown RBP15.91■□□□□ 0.14
USP3-205ENST00000557884 IBSPP21815 317 aaPredicted RBP15.91■□□□□ 0.14
USP3-205ENST00000557884 GLRA2P23416 452 aa15.91■□□□□ 0.14
USP3-205ENST00000557884 SLC12A3P55017 1021 aa15.91■□□□□ 0.14
USP3-205ENST00000557884 WDR5P61964 334 aaKnown RBP15.91■□□□□ 0.14
USP3-205ENST00000557884 CDC42EP1Q00587 391 aa15.91■□□□□ 0.14
USP3-205ENST00000557884 MCM6Q14566 821 aa15.91■□□□□ 0.14
USP3-205ENST00000557884 HABP4Q5JVS0 413 aaKnown RBP15.91■□□□□ 0.14
USP3-205ENST00000557884 RRAGBQ5VZM2 374 aa15.91■□□□□ 0.14
USP3-205ENST00000557884 RINT1Q6NUQ1 792 aa15.91■□□□□ 0.14
USP3-205ENST00000557884 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.91■□□□□ 0.14
USP3-205ENST00000557884 ZNF410Q86VK4 478 aa15.91■□□□□ 0.14
USP3-205ENST00000557884 ZNF710Q8N1W2 664 aa15.91■□□□□ 0.14
USP3-205ENST00000557884 PDILTQ8N807 584 aa15.91■□□□□ 0.14
USP3-205ENST00000557884 SYT2Q8N9I0 419 aaPredicted RBP15.91■□□□□ 0.14
USP3-205ENST00000557884 USP38Q8NB14 1042 aa15.91■□□□□ 0.14
USP3-205ENST00000557884 RNF149Q8NC42 400 aa15.91■□□□□ 0.14
USP3-205ENST00000557884 RAD54LQ92698 747 aa15.91■□□□□ 0.14
USP3-205ENST00000557884 APBB2Q92870 758 aa15.91■□□□□ 0.14
USP3-205ENST00000557884 TMX1Q9H3N1 280 aa15.91■□□□□ 0.14
USP3-205ENST00000557884 ERVK-5Q9HDB9 667 aa15.91■□□□□ 0.14
USP3-205ENST00000557884 BLOC1S4Q9NUP1 217 aa15.91■□□□□ 0.14
USP3-205ENST00000557884 SQORQ9Y6N5 450 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms