RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 USP13Q92995 863 aaPredicted RBP4.51□□□□□ -1.69
TDP1-217ENST00000557782 HDAC10Q969S8 669 aa4.51□□□□□ -1.69
TDP1-217ENST00000557782 RGMAQ96B86 450 aa4.51□□□□□ -1.69
TDP1-217ENST00000557782 TBC1D20Q96BZ9 403 aa4.51□□□□□ -1.69
TDP1-217ENST00000557782 ERP27Q96DN0 273 aa4.51□□□□□ -1.69
TDP1-217ENST00000557782 C22orf23Q9BZE7 217 aa4.51□□□□□ -1.69
TDP1-217ENST00000557782 CD244Q9BZW8 370 aa4.51□□□□□ -1.69
TDP1-217ENST00000557782 KIAA1586Q9HCI6 787 aa4.51□□□□□ -1.69
TDP1-217ENST00000557782 SLC6A20Q9NP91 592 aa4.51□□□□□ -1.69
TDP1-217ENST00000557782 CLIC5Q9NZA1 410 aa4.51□□□□□ -1.69
TDP1-217ENST00000557782 MARCH2Q9P0N8 246 aa4.51□□□□□ -1.69
TDP1-217ENST00000557782 GJD2Q9UKL4 321 aa4.51□□□□□ -1.69
TDP1-217ENST00000557782 PCDHGB2Q9Y5G2 931 aa4.51□□□□□ -1.69
TDP1-217ENST00000557782 NR2E3Q9Y5X4 410 aa4.51□□□□□ -1.69
TDP1-217ENST00000557782 CFAP20Q9Y6A4 193 aaKnown RBP4.51□□□□□ -1.69
TDP1-217ENST00000557782 X6R8D5 127 aa4.51□□□□□ -1.69
TDP1-217ENST00000557782 PRSS38A1L453 326 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 POM121BA6NF01 834 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 PRAMEF25A6NGN4 478 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 C22orf46C9J442 243 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 C11orf95C9JLR9 678 aaPredicted RBP4.5□□□□□ -1.69
TDP1-217ENST00000557782 IGF2BP3O00425 579 aaKnown RBP eCLIP4.5□□□□□ -1.69
TDP1-217ENST00000557782 FOXP2O15409 715 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 FFAR2O15552 330 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 PHGDHO43175 533 aaKnown RBP4.5□□□□□ -1.69
TDP1-217ENST00000557782 IRAK2O43187 625 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 LEFTY1O75610 366 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 APOL3O95236 402 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 ADAMTS2O95450 1211 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 FAM87AP0C7U9 286 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 BCRP11274 1271 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 ELNP15502 786 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 GLB1P16278 677 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 RXRGP48443 463 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 LGALS4P56470 323 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 RAB1AP62820 205 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 CDK17Q00537 523 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 ZNF543Q08ER8 600 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 TRIM28Q13263 835 aaKnown RBP4.5□□□□□ -1.69
TDP1-217ENST00000557782 G3BP1Q13283 466 aaKnown RBP eCLIP4.5□□□□□ -1.69
TDP1-217ENST00000557782 PRKG1Q13976 671 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 LAPTM4AQ15012 233 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 TOMM20Q15388 145 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 SGO2Q562F6 1265 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 CCDC93Q567U6 631 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 TTC38Q5R3I4 469 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 ZBTB41Q5SVQ8 909 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 CATSPEREQ5SY80 951 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 MROH9Q5TGP6 573 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 CYP4F22Q6NT55 531 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 APOA5Q6Q788 366 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 PAOXQ6QHF9 649 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 SYDE1Q6ZW31 735 aaPredicted RBP4.5□□□□□ -1.69
TDP1-217ENST00000557782 KCTD1Q719H9 257 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 MIGA2Q7L4E1 593 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 COLGALT2Q8IYK4 626 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 MSL3Q8N5Y2 521 aaKnown RBP4.5□□□□□ -1.69
TDP1-217ENST00000557782 WHAMMQ8TF30 809 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 NRG4Q8WWG1 115 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 RSAD2Q8WXG1 361 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 RIN2Q8WYP3 895 aaPredicted RBP4.5□□□□□ -1.69
TDP1-217ENST00000557782 DPF3Q92784 378 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 FATE1Q969F0 183 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 MTFMTQ96DP5 389 aaKnown RBP4.5□□□□□ -1.69
TDP1-217ENST00000557782 UBXN10Q96LJ8 280 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 ZSCAN31Q96LW9 406 aaPredicted RBP4.5□□□□□ -1.69
TDP1-217ENST00000557782 TUBGCP5Q96RT8 1024 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 SEC62Q99442 399 aaKnown RBP4.5□□□□□ -1.69
TDP1-217ENST00000557782 TTLL2Q9BWV7 592 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 UNKQ9C0B0 810 aaKnown RBP4.5□□□□□ -1.69
TDP1-217ENST00000557782 DUSP15Q9H1R2 295 aaPredicted RBP4.5□□□□□ -1.69
TDP1-217ENST00000557782 SEMA4AQ9H3S1 761 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 POFUT1Q9H488 388 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 AKTIPQ9H8T0 292 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 RC3H2Q9HBD1 1191 aaKnown RBP4.5□□□□□ -1.69
TDP1-217ENST00000557782 C1GALT1Q9NS00 363 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 SMC4Q9NTJ3 1288 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 RIC8BQ9NVN3 520 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 OGDHLQ9ULD0 1010 aa4.5□□□□□ -1.69
TDP1-217ENST00000557782 A0A088AWK7 358 aa4.49□□□□□ -1.69
TDP1-217ENST00000557782 FAM95CA0A1B0GW59 222 aa4.49□□□□□ -1.69
TDP1-217ENST00000557782 RRN3P2A6NIE6 340 aa4.49□□□□□ -1.69
TDP1-217ENST00000557782 PRR33A8MZF0 331 aa4.49□□□□□ -1.69
TDP1-217ENST00000557782 hCG_1984214I3L0E3 225 aa4.49□□□□□ -1.69
TDP1-217ENST00000557782 ELL2O00472 640 aaPredicted RBP4.49□□□□□ -1.69
TDP1-217ENST00000557782 BUB1BO60566 1050 aaPredicted RBP4.49□□□□□ -1.69
TDP1-217ENST00000557782 FGF18O76093 207 aa4.49□□□□□ -1.69
TDP1-217ENST00000557782 IL18RAPO95256 599 aa4.49□□□□□ -1.69
TDP1-217ENST00000557782 PYGLP06737 847 aa4.49□□□□□ -1.69
TDP1-217ENST00000557782 THP07101 528 aa4.49□□□□□ -1.69
TDP1-217ENST00000557782 DHRS4L1P0CG22 281 aa4.49□□□□□ -1.69
TDP1-217ENST00000557782 MAP4P27816 1152 aaKnown RBP4.49□□□□□ -1.69
TDP1-217ENST00000557782 LTKP29376 864 aa4.49□□□□□ -1.69
TDP1-217ENST00000557782 WASP42768 502 aa4.49□□□□□ -1.69
TDP1-217ENST00000557782 MALLQ13021 153 aa4.49□□□□□ -1.69
TDP1-217ENST00000557782 GRM1Q13255 1194 aa4.49□□□□□ -1.69
TDP1-217ENST00000557782 DAG1Q14118 895 aa4.49□□□□□ -1.69
TDP1-217ENST00000557782 FGL2Q14314 439 aa4.49□□□□□ -1.69
TDP1-217ENST00000557782 NFKBIBQ15653 356 aa4.49□□□□□ -1.69
TDP1-217ENST00000557782 CHRNA2Q15822 529 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms