RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 MMEP08473 750 aa12.81□□□□□ -0.36
VIPAS39-211ENST00000557658 CHN1P15882 459 aa12.81□□□□□ -0.36
VIPAS39-211ENST00000557658 RPA1P27694 616 aa12.81□□□□□ -0.36
VIPAS39-211ENST00000557658 ELF1P32519 619 aa12.81□□□□□ -0.36
VIPAS39-211ENST00000557658 PSMC6P62333 389 aa12.81□□□□□ -0.36
VIPAS39-211ENST00000557658 PPATQ06203 517 aa12.81□□□□□ -0.36
VIPAS39-211ENST00000557658 PICALMQ13492 652 aa12.81□□□□□ -0.36
VIPAS39-211ENST00000557658 PLS1Q14651 629 aa12.81□□□□□ -0.36
VIPAS39-211ENST00000557658 NBPF9Q3BBW0 867 aa12.81□□□□□ -0.36
VIPAS39-211ENST00000557658 CROCCP2Q86T23 111 aa12.81□□□□□ -0.36
VIPAS39-211ENST00000557658 GLYCTKQ8IVS8 523 aa12.81□□□□□ -0.36
VIPAS39-211ENST00000557658 TBC1D22AQ8WUA7 517 aa12.81□□□□□ -0.36
VIPAS39-211ENST00000557658 SELENOSQ9BQE4 189 aa12.81□□□□□ -0.36
VIPAS39-211ENST00000557658 PCDHB13Q9Y5F0 798 aa12.81□□□□□ -0.36
VIPAS39-211ENST00000557658 STK24Q9Y6E0 443 aa12.81□□□□□ -0.36
VIPAS39-211ENST00000557658 STRCQ7RTU9 1775 aa12.81□□□□□ -0.36
VIPAS39-211ENST00000557658 MEIS1O00470 390 aa12.81□□□□□ -0.36
VIPAS39-211ENST00000557658 ASAP2O43150 1006 aa12.81□□□□□ -0.36
VIPAS39-211ENST00000557658 PPP1R12BO60237 982 aaPredicted RBP12.81□□□□□ -0.36
VIPAS39-211ENST00000557658 GCNT3O95395 438 aa12.81□□□□□ -0.36
VIPAS39-211ENST00000557658 MMP13P45452 471 aa12.81□□□□□ -0.36
VIPAS39-211ENST00000557658 GPSM2P81274 684 aa12.81□□□□□ -0.36
VIPAS39-211ENST00000557658 KIAA1755Q5JYT7 1200 aa12.81□□□□□ -0.36
VIPAS39-211ENST00000557658 DCAF12L1Q5VU92 463 aa12.81□□□□□ -0.36
VIPAS39-211ENST00000557658 KCTD1Q719H9 257 aa12.81□□□□□ -0.36
VIPAS39-211ENST00000557658 FMNL3Q8IVF7 1028 aa12.81□□□□□ -0.36
VIPAS39-211ENST00000557658 STK33Q9BYT3 514 aa12.81□□□□□ -0.36
VIPAS39-211ENST00000557658 RTCBQ9Y3I0 505 aaKnown RBP12.81□□□□□ -0.36
VIPAS39-211ENST00000557658 C10orf71Q711Q0 1435 aa12.81□□□□□ -0.36
VIPAS39-211ENST00000557658 NRAPQ86VF7 1730 aa12.81□□□□□ -0.36
VIPAS39-211ENST00000557658 TBX3O15119 743 aa12.8□□□□□ -0.36
VIPAS39-211ENST00000557658 GNPATO15228 680 aa12.8□□□□□ -0.36
VIPAS39-211ENST00000557658 CLIC2O15247 247 aa12.8□□□□□ -0.36
VIPAS39-211ENST00000557658 PPIP5K2O43314 1243 aa12.8□□□□□ -0.36
VIPAS39-211ENST00000557658 MGRN1O60291 552 aa12.8□□□□□ -0.36
VIPAS39-211ENST00000557658 SHBGP04278 402 aa12.8□□□□□ -0.36
VIPAS39-211ENST00000557658 ABCB4P21439 1286 aa12.8□□□□□ -0.36
VIPAS39-211ENST00000557658 ATP2B4P23634 1241 aa12.8□□□□□ -0.36
VIPAS39-211ENST00000557658 DRG2P55039 364 aaKnown RBP12.8□□□□□ -0.36
VIPAS39-211ENST00000557658 KLRC3Q07444 240 aa12.8□□□□□ -0.36
VIPAS39-211ENST00000557658 SPIRE1Q08AE8 756 aa12.8□□□□□ -0.36
VIPAS39-211ENST00000557658 ITIH4Q14624 930 aa12.8□□□□□ -0.36
VIPAS39-211ENST00000557658 FAM228AQ86W67 206 aa12.8□□□□□ -0.36
VIPAS39-211ENST00000557658 ZNF317Q96PQ6 595 aaPredicted RBP12.8□□□□□ -0.36
VIPAS39-211ENST00000557658 EPB41L4BQ9H329 900 aa12.8□□□□□ -0.36
VIPAS39-211ENST00000557658 MYO3BQ8WXR4 1341 aa12.8□□□□□ -0.36
VIPAS39-211ENST00000557658 RGS16O15492 202 aaPredicted RBP12.8□□□□□ -0.36
VIPAS39-211ENST00000557658 GSTA1P08263 222 aa12.8□□□□□ -0.36
VIPAS39-211ENST00000557658 SPATA31C1P0DKV0 1188 aa12.8□□□□□ -0.36
VIPAS39-211ENST00000557658 PLTPP55058 493 aa12.8□□□□□ -0.36
VIPAS39-211ENST00000557658 AP3B2Q13367 1082 aa12.8□□□□□ -0.36
VIPAS39-211ENST00000557658 PRR16Q569H4 304 aa12.8□□□□□ -0.36
VIPAS39-211ENST00000557658 ADAT2Q7Z6V5 191 aaKnown RBP12.8□□□□□ -0.36
VIPAS39-211ENST00000557658 JAMLQ86YT9 394 aa12.8□□□□□ -0.36
VIPAS39-211ENST00000557658 FAM186BQ8IYM0 893 aa12.8□□□□□ -0.36
VIPAS39-211ENST00000557658 OLIG1Q8TAK6 271 aa12.8□□□□□ -0.36
VIPAS39-211ENST00000557658 ETNPPLQ8TBG4 499 aa12.8□□□□□ -0.36
VIPAS39-211ENST00000557658 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.8□□□□□ -0.36
VIPAS39-211ENST00000557658 DNAJC12Q9UKB3 198 aa12.8□□□□□ -0.36
VIPAS39-211ENST00000557658 DAGLAQ9Y4D2 1042 aa12.8□□□□□ -0.36
VIPAS39-211ENST00000557658 PCDHA1Q9Y5I3 950 aa12.8□□□□□ -0.36
VIPAS39-211ENST00000557658 TLDC2A0PJX2 215 aa12.79□□□□□ -0.36
VIPAS39-211ENST00000557658 GBP1P32455 592 aa12.79□□□□□ -0.36
VIPAS39-211ENST00000557658 PSMC2P35998 433 aaKnown RBP12.79□□□□□ -0.36
VIPAS39-211ENST00000557658 MAPK7Q13164 816 aa12.79□□□□□ -0.36
VIPAS39-211ENST00000557658 DRAP1Q14919 205 aaPredicted RBP12.79□□□□□ -0.36
VIPAS39-211ENST00000557658 QRICH1Q2TAL8 776 aa12.79□□□□□ -0.36
VIPAS39-211ENST00000557658 C6orf118Q5T5N4 469 aa12.79□□□□□ -0.36
VIPAS39-211ENST00000557658 ATXN2LQ8WWM7 1075 aaKnown RBP12.79□□□□□ -0.36
VIPAS39-211ENST00000557658 N4BP2L2Q92802 583 aaPredicted RBP12.79□□□□□ -0.36
VIPAS39-211ENST00000557658 GLG1Q92896 1179 aa12.79□□□□□ -0.36
VIPAS39-211ENST00000557658 VEZTQ9HBM0 779 aa12.79□□□□□ -0.36
VIPAS39-211ENST00000557658 ERVK-5Q9HDB9 667 aa12.79□□□□□ -0.36
VIPAS39-211ENST00000557658 DONSONQ9NYP3 566 aa12.79□□□□□ -0.36
VIPAS39-211ENST00000557658 SAMD15Q9P1V8 674 aa12.79□□□□□ -0.36
VIPAS39-211ENST00000557658 SERPINB13Q9UIV8 391 aa12.79□□□□□ -0.36
VIPAS39-211ENST00000557658 GGA1Q9UJY5 639 aa12.79□□□□□ -0.36
VIPAS39-211ENST00000557658 SNX24Q9Y343 169 aa12.79□□□□□ -0.36
VIPAS39-211ENST00000557658 SPATA31A5Q5VU36 1347 aa12.79□□□□□ -0.36
VIPAS39-211ENST00000557658 SPATA31A7Q8IWB4 1347 aa12.79□□□□□ -0.36
VIPAS39-211ENST00000557658 IGSF9BQ9UPX0 1349 aa12.79□□□□□ -0.36
VIPAS39-211ENST00000557658 RSPH10B2B2RC85 870 aa12.79□□□□□ -0.36
VIPAS39-211ENST00000557658 KIAA0391O15091 583 aaKnown RBP12.79□□□□□ -0.36
VIPAS39-211ENST00000557658 KIF1CO43896 1103 aaKnown RBP12.79□□□□□ -0.36
VIPAS39-211ENST00000557658 AGTP01019 485 aa12.79□□□□□ -0.36
VIPAS39-211ENST00000557658 RSPH10BP0C881 870 aa12.79□□□□□ -0.36
VIPAS39-211ENST00000557658 KRT13P13646 458 aa12.79□□□□□ -0.36
VIPAS39-211ENST00000557658 HSPA6P17066 643 aa12.79□□□□□ -0.36
VIPAS39-211ENST00000557658 GAP43P17677 238 aa12.79□□□□□ -0.36
VIPAS39-211ENST00000557658 TNFAIP3P21580 790 aa12.79□□□□□ -0.36
VIPAS39-211ENST00000557658 COPB2P35606 906 aa12.79□□□□□ -0.36
VIPAS39-211ENST00000557658 ARHGAP4P98171 946 aa12.79□□□□□ -0.36
VIPAS39-211ENST00000557658 ADCY2Q08462 1091 aa12.79□□□□□ -0.36
VIPAS39-211ENST00000557658 PIGWQ7Z7B1 504 aa12.79□□□□□ -0.36
VIPAS39-211ENST00000557658 COL23A1Q86Y22 540 aaPredicted RBP12.79□□□□□ -0.36
VIPAS39-211ENST00000557658 RNF25Q96BH1 459 aaPredicted RBP12.79□□□□□ -0.36
VIPAS39-211ENST00000557658 BORCS6Q96GS4 357 aa12.79□□□□□ -0.36
VIPAS39-211ENST00000557658 STMN4Q9H169 189 aaPredicted RBP12.79□□□□□ -0.36
VIPAS39-211ENST00000557658 AZI2Q9H6S1 392 aa12.79□□□□□ -0.36
VIPAS39-211ENST00000557658 INTS9Q9NV88 658 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms