RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 SLC7A3Q8WY07 619 aa13.96□□□□□ -0.17
SLIRP-211ENST00000557623 CCDC43Q96MW1 224 aaKnown RBP13.96□□□□□ -0.17
SLIRP-211ENST00000557623 POLR3CQ9BUI4 534 aaPredicted RBP13.96□□□□□ -0.17
SLIRP-211ENST00000557623 OSBPL7Q9BZF2 842 aa13.96□□□□□ -0.17
SLIRP-211ENST00000557623 ANKEF1Q9NU02 776 aa13.96□□□□□ -0.17
SLIRP-211ENST00000557623 WRAP73Q9P2S5 460 aaPredicted RBP13.96□□□□□ -0.17
SLIRP-211ENST00000557623 GINS2Q9Y248 185 aa13.96□□□□□ -0.17
SLIRP-211ENST00000557623 GPR182O15218 404 aa13.95□□□□□ -0.18
SLIRP-211ENST00000557623 GPR32O75388 356 aa13.95□□□□□ -0.18
SLIRP-211ENST00000557623 RPS6KA5O75582 802 aa13.95□□□□□ -0.18
SLIRP-211ENST00000557623 BMP15O95972 392 aa13.95□□□□□ -0.18
SLIRP-211ENST00000557623 PDIA4P13667 645 aaKnown RBP13.95□□□□□ -0.18
SLIRP-211ENST00000557623 SYT1P21579 422 aa13.95□□□□□ -0.18
SLIRP-211ENST00000557623 MUTP22033 750 aa13.95□□□□□ -0.18
SLIRP-211ENST00000557623 RPA1P27694 616 aa13.95□□□□□ -0.18
SLIRP-211ENST00000557623 CD52P31358 61 aa13.95□□□□□ -0.18
SLIRP-211ENST00000557623 PBX2P40425 430 aa13.95□□□□□ -0.18
SLIRP-211ENST00000557623 RABGGTBP53611 331 aa13.95□□□□□ -0.18
SLIRP-211ENST00000557623 POLGP54098 1239 aaPredicted RBP13.95□□□□□ -0.18
SLIRP-211ENST00000557623 NPEPPSP55786 919 aa13.95□□□□□ -0.18
SLIRP-211ENST00000557623 NLRP11P59045 1033 aaKnown RBP13.95□□□□□ -0.18
SLIRP-211ENST00000557623 DEFB103AP81534 67 aa13.95□□□□□ -0.18
SLIRP-211ENST00000557623 KIZQ2M2Z5 673 aa13.95□□□□□ -0.18
SLIRP-211ENST00000557623 XKR9Q5GH70 373 aa13.95□□□□□ -0.18
SLIRP-211ENST00000557623 DTHD1Q6ZMT9 781 aa13.95□□□□□ -0.18
SLIRP-211ENST00000557623 PLPP6Q8IY26 295 aa13.95□□□□□ -0.18
SLIRP-211ENST00000557623 TCP11Q8WWU5 503 aa13.95□□□□□ -0.18
SLIRP-211ENST00000557623 SH2D3AQ9BRG2 576 aa13.95□□□□□ -0.18
SLIRP-211ENST00000557623 ZBED2Q9BTP6 218 aa13.95□□□□□ -0.18
SLIRP-211ENST00000557623 DHX33Q9H6R0 707 aaKnown RBP13.95□□□□□ -0.18
SLIRP-211ENST00000557623 AGO3Q9H9G7 860 aaKnown RBP13.95□□□□□ -0.18
SLIRP-211ENST00000557623 SLC28A3Q9HAS3 691 aa13.95□□□□□ -0.18
SLIRP-211ENST00000557623 LRWD1Q9UFC0 647 aa13.95□□□□□ -0.18
SLIRP-211ENST00000557623 TLL1O43897 1013 aa13.94□□□□□ -0.18
SLIRP-211ENST00000557623 GPC3P51654 580 aa13.94□□□□□ -0.18
SLIRP-211ENST00000557623 TTC3P53804 2025 aa13.94□□□□□ -0.18
SLIRP-211ENST00000557623 ATP2C1P98194 919 aaPredicted RBP13.94□□□□□ -0.18
SLIRP-211ENST00000557623 NFX1Q12986 1120 aaKnown RBP13.94□□□□□ -0.18
SLIRP-211ENST00000557623 ARL6IP4Q66PJ3 421 aaKnown RBP13.94□□□□□ -0.18
SLIRP-211ENST00000557623 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.94□□□□□ -0.18
SLIRP-211ENST00000557623 CATSPER3Q86XQ3 398 aa13.94□□□□□ -0.18
SLIRP-211ENST00000557623 MYOCDQ8IZQ8 938 aa13.94□□□□□ -0.18
SLIRP-211ENST00000557623 DDX27Q96GQ7 796 aaKnown RBP13.94□□□□□ -0.18
SLIRP-211ENST00000557623 SCLT1Q96NL6 688 aa13.94□□□□□ -0.18
SLIRP-211ENST00000557623 NACC1Q96RE7 527 aa13.94□□□□□ -0.18
SLIRP-211ENST00000557623 OSMRQ99650 979 aa13.94□□□□□ -0.18
SLIRP-211ENST00000557623 SEMA6BQ9H3T3 888 aa13.94□□□□□ -0.18
SLIRP-211ENST00000557623 ZNF576Q9H609 170 aa13.94□□□□□ -0.18
SLIRP-211ENST00000557623 SUCLA2Q9P2R7 463 aaPredicted RBP13.94□□□□□ -0.18
SLIRP-211ENST00000557623 PADI3Q9ULW8 664 aa13.94□□□□□ -0.18
SLIRP-211ENST00000557623 STX6O43752 255 aa13.93□□□□□ -0.18
SLIRP-211ENST00000557623 MED24O75448 989 aa13.93□□□□□ -0.18
SLIRP-211ENST00000557623 DGAT1O75907 488 aa13.93□□□□□ -0.18
SLIRP-211ENST00000557623 GJB5O95377 273 aa13.93□□□□□ -0.18
SLIRP-211ENST00000557623 SLC34A2O95436 690 aa13.93□□□□□ -0.18
SLIRP-211ENST00000557623 SPATA31C1P0DKV0 1188 aa13.93□□□□□ -0.18
SLIRP-211ENST00000557623 EIF4BP23588 611 aaKnown RBP13.93□□□□□ -0.18
SLIRP-211ENST00000557623 PPP1R15BQ5SWA1 713 aa13.93□□□□□ -0.18
SLIRP-211ENST00000557623 KRT79Q5XKE5 535 aa13.93□□□□□ -0.18
SLIRP-211ENST00000557623 Q7L0L9 218 aa13.93□□□□□ -0.18
SLIRP-211ENST00000557623 FERMT3Q86UX7 667 aa13.93□□□□□ -0.18
SLIRP-211ENST00000557623 ZNF410Q86VK4 478 aa13.93□□□□□ -0.18
SLIRP-211ENST00000557623 IGSF22Q8N9C0 903 aa13.93□□□□□ -0.18
SLIRP-211ENST00000557623 NLRP7Q8WX94 980 aa13.93□□□□□ -0.18
SLIRP-211ENST00000557623 TOP1MTQ969P6 601 aa13.93□□□□□ -0.18
SLIRP-211ENST00000557623 PPP1R16BQ96T49 567 aa13.93□□□□□ -0.18
SLIRP-211ENST00000557623 RAD9AQ99638 391 aa13.93□□□□□ -0.18
SLIRP-211ENST00000557623 MTRQ99707 1265 aa13.93□□□□□ -0.18
SLIRP-211ENST00000557623 GCOM2Q9BZD3 368 aaPredicted RBP13.93□□□□□ -0.18
SLIRP-211ENST00000557623 NKX2-4Q9H2Z4 354 aa13.93□□□□□ -0.18
SLIRP-211ENST00000557623 ADAMTS10Q9H324 1103 aa13.93□□□□□ -0.18
SLIRP-211ENST00000557623 ZSCAN16Q9H4T2 348 aaPredicted RBP13.93□□□□□ -0.18
SLIRP-211ENST00000557623 CDHR5Q9HBB8 845 aa13.93□□□□□ -0.18
SLIRP-211ENST00000557623 ERVK-5Q9HDB9 667 aa13.93□□□□□ -0.18
SLIRP-211ENST00000557623 MTMR10Q9NXD2 777 aa13.93□□□□□ -0.18
SLIRP-211ENST00000557623 DBR1Q9UK59 544 aaKnown RBP13.93□□□□□ -0.18
SLIRP-211ENST00000557623 YBX2Q9Y2T7 364 aaKnown RBP13.93□□□□□ -0.18
SLIRP-211ENST00000557623 NOC2LQ9Y3T9 749 aaKnown RBP13.93□□□□□ -0.18
SLIRP-211ENST00000557623 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.92□□□□□ -0.18
SLIRP-211ENST00000557623 ENPP3O14638 875 aa13.92□□□□□ -0.18
SLIRP-211ENST00000557623 ZBTB39O15060 712 aa13.92□□□□□ -0.18
SLIRP-211ENST00000557623 ASAP2O43150 1006 aa13.92□□□□□ -0.18
SLIRP-211ENST00000557623 CCT6AP40227 531 aaKnown RBP13.92□□□□□ -0.18
SLIRP-211ENST00000557623 RARRES1P49788 294 aa13.92□□□□□ -0.18
SLIRP-211ENST00000557623 DRP2Q13474 957 aa13.92□□□□□ -0.18
SLIRP-211ENST00000557623 EMC2Q15006 297 aa13.92□□□□□ -0.18
SLIRP-211ENST00000557623 PPP2R2DQ66LE6 453 aa13.92□□□□□ -0.18
SLIRP-211ENST00000557623 RHPN2Q8IUC4 686 aa13.92□□□□□ -0.18
SLIRP-211ENST00000557623 PIGOQ8TEQ8 1089 aa13.92□□□□□ -0.18
SLIRP-211ENST00000557623 TMEM40Q8WWA1 233 aa13.92□□□□□ -0.18
SLIRP-211ENST00000557623 PSPC1Q8WXF1 523 aaKnown RBP13.92□□□□□ -0.18
SLIRP-211ENST00000557623 FAM161BQ96MY7 647 aa13.92□□□□□ -0.18
SLIRP-211ENST00000557623 INO80BQ9C086 356 aaPredicted RBP13.92□□□□□ -0.18
SLIRP-211ENST00000557623 TTYH1Q9H313 450 aaPredicted RBP13.92□□□□□ -0.18
SLIRP-211ENST00000557623 ATP6V0A4Q9HBG4 840 aa13.92□□□□□ -0.18
SLIRP-211ENST00000557623 ST3GAL5Q9UNP4 418 aa13.92□□□□□ -0.18
SLIRP-211ENST00000557623 INSL6Q9Y581 213 aa13.92□□□□□ -0.18
SLIRP-211ENST00000557623 NLRC5Q86WI3 1866 aa13.92□□□□□ -0.18
SLIRP-211ENST00000557623 LAMA3Q16787 3333 aa13.92□□□□□ -0.18
SLIRP-211ENST00000557623 RALGAPA2Q2PPJ7 1873 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms