RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 PAN2Q504Q3 1202 aaKnown RBP7.88□□□□□ -1.15
SPTLC2-206ENST00000557566 PPP1R26Q5T8A7 1209 aaPredicted RBP7.88□□□□□ -1.15
SPTLC2-206ENST00000557566 LLGL2Q6P1M3 1020 aa7.88□□□□□ -1.15
SPTLC2-206ENST00000557566 BTNL9Q6UXG8 535 aa7.88□□□□□ -1.15
SPTLC2-206ENST00000557566 TRIM50Q86XT4 487 aa7.88□□□□□ -1.15
SPTLC2-206ENST00000557566 SIX5Q8N196 739 aa7.88□□□□□ -1.15
SPTLC2-206ENST00000557566 CLASRPQ8N2M8 674 aaKnown RBP7.88□□□□□ -1.15
SPTLC2-206ENST00000557566 SUMF1Q8NBK3 374 aa7.88□□□□□ -1.15
SPTLC2-206ENST00000557566 RGS22Q8NE09 1264 aa7.88□□□□□ -1.15
SPTLC2-206ENST00000557566 CASP10Q92851 521 aa7.88□□□□□ -1.15
SPTLC2-206ENST00000557566 SECISBP2LQ93073 1101 aaKnown RBP7.88□□□□□ -1.15
SPTLC2-206ENST00000557566 ITPKCQ96DU7 683 aa7.88□□□□□ -1.15
SPTLC2-206ENST00000557566 SPATA33Q96N06 139 aa7.88□□□□□ -1.15
SPTLC2-206ENST00000557566 STRBPQ96SI9 672 aaKnown RBP7.88□□□□□ -1.15
SPTLC2-206ENST00000557566 C16orf70Q9BSU1 422 aa7.88□□□□□ -1.15
SPTLC2-206ENST00000557566 MAF1Q9H063 256 aa7.88□□□□□ -1.15
SPTLC2-206ENST00000557566 ADAM7Q9H2U9 754 aa7.88□□□□□ -1.15
SPTLC2-206ENST00000557566 RNPEPQ9H4A4 650 aa7.88□□□□□ -1.15
SPTLC2-206ENST00000557566 TUT1Q9H6E5 874 aaKnown RBP7.88□□□□□ -1.15
SPTLC2-206ENST00000557566 ZFAND3Q9H8U3 227 aa7.88□□□□□ -1.15
SPTLC2-206ENST00000557566 ERVK-5Q9HDB9 667 aa7.88□□□□□ -1.15
SPTLC2-206ENST00000557566 IL1RAPL2Q9NP60 686 aa7.88□□□□□ -1.15
SPTLC2-206ENST00000557566 EXOC6BQ9Y2D4 811 aa7.88□□□□□ -1.15
SPTLC2-206ENST00000557566 CACNA1IQ9P0X4 2223 aa7.88□□□□□ -1.15
SPTLC2-206ENST00000557566 FNDC1Q4ZHG4 1894 aaPredicted RBP7.87□□□□□ -1.15
SPTLC2-206ENST00000557566 WDR19Q8NEZ3 1342 aa7.87□□□□□ -1.15
SPTLC2-206ENST00000557566 WIPF1O43516 503 aa7.87□□□□□ -1.15
SPTLC2-206ENST00000557566 EIF3JO75822 258 aaKnown RBP7.87□□□□□ -1.15
SPTLC2-206ENST00000557566 HSP90AA1P07900 732 aaKnown RBP7.87□□□□□ -1.15
SPTLC2-206ENST00000557566 SP9P0CG40 484 aa7.87□□□□□ -1.15
SPTLC2-206ENST00000557566 STAG3L1P0CL83 205 aa7.87□□□□□ -1.15
SPTLC2-206ENST00000557566 ARP10275 920 aa7.87□□□□□ -1.15
SPTLC2-206ENST00000557566 DDIT3P35638 169 aa7.87□□□□□ -1.15
SPTLC2-206ENST00000557566 ERVFC1P60507 584 aa7.87□□□□□ -1.15
SPTLC2-206ENST00000557566 NFX1Q12986 1120 aaKnown RBP7.87□□□□□ -1.15
SPTLC2-206ENST00000557566 USP4Q13107 963 aa7.87□□□□□ -1.15
SPTLC2-206ENST00000557566 HDAC1Q13547 482 aaPredicted RBP7.87□□□□□ -1.15
SPTLC2-206ENST00000557566 TDGQ13569 410 aa7.87□□□□□ -1.15
SPTLC2-206ENST00000557566 HSP90AB4PQ58FF6 505 aa7.87□□□□□ -1.15
SPTLC2-206ENST00000557566 SPOUT1Q5T280 376 aaKnown RBP7.87□□□□□ -1.15
SPTLC2-206ENST00000557566 PLPP4Q5VZY2 271 aa7.87□□□□□ -1.15
SPTLC2-206ENST00000557566 TTBK2Q6IQ55 1244 aa7.87□□□□□ -1.15
SPTLC2-206ENST00000557566 KCNV1Q6PIU1 500 aa7.87□□□□□ -1.15
SPTLC2-206ENST00000557566 NPAS4Q8IUM7 802 aa7.87□□□□□ -1.15
SPTLC2-206ENST00000557566 BORCS6Q96GS4 357 aa7.87□□□□□ -1.15
SPTLC2-206ENST00000557566 BOLA2Q9H3K6 86 aa7.87□□□□□ -1.15
SPTLC2-206ENST00000557566 EHMT1Q9H9B1 1298 aa7.87□□□□□ -1.15
SPTLC2-206ENST00000557566 CYP26B1Q9NR63 512 aa7.87□□□□□ -1.15
SPTLC2-206ENST00000557566 TMPRSS4Q9NRS4 437 aa7.87□□□□□ -1.15
SPTLC2-206ENST00000557566 GMPR2Q9P2T1 348 aaKnown RBP7.87□□□□□ -1.15
SPTLC2-206ENST00000557566 CDH22Q9UJ99 828 aa7.87□□□□□ -1.15
SPTLC2-206ENST00000557566 DBR1Q9UK59 544 aaKnown RBP7.87□□□□□ -1.15
SPTLC2-206ENST00000557566 DUSP12Q9UNI6 340 aa7.87□□□□□ -1.15
SPTLC2-206ENST00000557566 DENND4AQ7Z401 1863 aa7.87□□□□□ -1.15
SPTLC2-206ENST00000557566 GCN1Q92616 2671 aaKnown RBP7.86□□□□□ -1.15
SPTLC2-206ENST00000557566 MYH6P13533 1939 aa7.86□□□□□ -1.15
SPTLC2-206ENST00000557566 LOXHD1Q8IVV2 1947 aa7.86□□□□□ -1.15
SPTLC2-206ENST00000557566 CCDC171Q6TFL3 1326 aa7.86□□□□□ -1.15
SPTLC2-206ENST00000557566 TSPY2A6NKD2 308 aa7.86□□□□□ -1.15
SPTLC2-206ENST00000557566 ERVH48-1M5A8F1 160 aa7.86□□□□□ -1.15
SPTLC2-206ENST00000557566 FSCN2O14926 492 aa7.86□□□□□ -1.15
SPTLC2-206ENST00000557566 FGF18O76093 207 aa7.86□□□□□ -1.15
SPTLC2-206ENST00000557566 GGPS1O95749 300 aa7.86□□□□□ -1.15
SPTLC2-206ENST00000557566 AVPP01185 164 aa7.86□□□□□ -1.15
SPTLC2-206ENST00000557566 CHRNA1P02708 482 aa7.86□□□□□ -1.15
SPTLC2-206ENST00000557566 APPP05067 770 aa7.86□□□□□ -1.15
SPTLC2-206ENST00000557566 TIMP2P16035 220 aa7.86□□□□□ -1.15
SPTLC2-206ENST00000557566 GNAT2P19087 354 aa7.86□□□□□ -1.15
SPTLC2-206ENST00000557566 ATP1A2P50993 1020 aa7.86□□□□□ -1.15
SPTLC2-206ENST00000557566 TBC1D8BQ0IIM8 1120 aa7.86□□□□□ -1.15
SPTLC2-206ENST00000557566 COL9A3Q14050 684 aaPredicted RBP7.86□□□□□ -1.15
SPTLC2-206ENST00000557566 LPIN1Q14693 890 aa7.86□□□□□ -1.15
SPTLC2-206ENST00000557566 HSDL1Q3SXM5 330 aa7.86□□□□□ -1.15
SPTLC2-206ENST00000557566 CELF3Q5SZQ8 465 aaKnown RBP7.86□□□□□ -1.15
SPTLC2-206ENST00000557566 ARHGEF16Q5VV41 709 aa7.86□□□□□ -1.15
SPTLC2-206ENST00000557566 RUFY4Q6ZNE9 571 aa7.86□□□□□ -1.15
SPTLC2-206ENST00000557566 CLEC17AQ6ZS10 378 aa7.86□□□□□ -1.15
SPTLC2-206ENST00000557566 THNSL1Q8IYQ7 743 aa7.86□□□□□ -1.15
SPTLC2-206ENST00000557566 RHPN1Q8TCX5 695 aa7.86□□□□□ -1.15
SPTLC2-206ENST00000557566 TAAR1Q96RJ0 339 aa7.86□□□□□ -1.15
SPTLC2-206ENST00000557566 RMDN3Q96TC7 470 aa7.86□□□□□ -1.15
SPTLC2-206ENST00000557566 FTHL17Q9BXU8 183 aa7.86□□□□□ -1.15
SPTLC2-206ENST00000557566 EPB41L4AQ9HCS5 686 aaPredicted RBP7.86□□□□□ -1.15
SPTLC2-206ENST00000557566 NGRNQ9NPE2 291 aaKnown RBP7.86□□□□□ -1.15
SPTLC2-206ENST00000557566 CYLDQ9NQC7 956 aa7.86□□□□□ -1.15
SPTLC2-206ENST00000557566 ENTPD7Q9NQZ7 604 aa7.86□□□□□ -1.15
SPTLC2-206ENST00000557566 SETD4Q9NVD3 440 aa7.86□□□□□ -1.15
SPTLC2-206ENST00000557566 TMEM260Q9NX78 707 aa7.86□□□□□ -1.15
SPTLC2-206ENST00000557566 PCDHB11Q9Y5F2 797 aa7.86□□□□□ -1.15
SPTLC2-206ENST00000557566 FLNBO75369 2602 aaKnown RBP7.85□□□□□ -1.15
SPTLC2-206ENST00000557566 SORBS3O60504 671 aa7.85□□□□□ -1.15
SPTLC2-206ENST00000557566 EOMESO95936 686 aa7.85□□□□□ -1.15
SPTLC2-206ENST00000557566 LGALS2P05162 132 aa7.85□□□□□ -1.15
SPTLC2-206ENST00000557566 SCG2P13521 617 aa7.85□□□□□ -1.15
SPTLC2-206ENST00000557566 ATP5JP18859 108 aa7.85□□□□□ -1.15
SPTLC2-206ENST00000557566 RBM25P49756 843 aaKnown RBP7.85□□□□□ -1.15
SPTLC2-206ENST00000557566 CLDN10P78369 228 aa7.85□□□□□ -1.15
SPTLC2-206ENST00000557566 ARHGAP4P98171 946 aa7.85□□□□□ -1.15
SPTLC2-206ENST00000557566 HSP90AA2PQ14568 343 aaPredicted RBP7.85□□□□□ -1.15
SPTLC2-206ENST00000557566 USH1GQ495M9 461 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms